| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174309
Identifier: 126174309
GI number: 126174309
Start: 2423230
End: 2425287
Strand: Reverse
Name: 126174309
Synonym: Sbal_2088
Alternate gene names: NA
Gene position: 2425287-2423230 (Counterclockwise)
Preceding gene: 126174312
Following gene: 126174307
Centisome position: 47.3
GC content: 48.1
Gene sequence:
>2058_bases ATGAGTAAGGCCACTTTTGATCCTACACTTTATAATAAAAGTAATAATGAACCCTTTAATCAAGTGTTGGATAAGCATTT ATCTCGCCGTAATTTCGTAAAAAGTGGCTTAGGCCTCAGCGCTATGACTGCTTTTGCCAGTGTTGGCTTAACCGCTTGTG GTTCAGACAATGAAACTGTTCCTAAACCTGTCGATCCAGTCACACCAGTGCCACCGACTAAAAGTAGTGCCAAGCTTAAC TTTACATCGGTTGCGGGTTCTCGCTTAGATGCGGTTGTCGTGCCAGAAGGTTACACAGCGCAGGTGTTAGCACCTTGGGG CACGCCATTAAACGCAAAAGCGGCACCATGGAAAAACGATGGTAGTAACACGGCCGATGACCAAGCCAACTCAGTGGGCA TGCACCACGATGGCATGCATTTCTTCCCATTAAATGATGCGGGTGATGACGGTCTACTCTGCATTAACCACGAATACATT GACGAAGATGCCTTGCATCCTACGGGCCAGACATTTGACCCCACTTCTGGTCTTCGCACTGTTATCGATGAAGTGCGCAA AGAAATTAACGCCCATGGCGTGTCGGTTGTGCGTATAAAACTGATGAATAATCAATGGGAAGTCGTCATTAATGATGGTC ATAACCGTCGATTCACTGGCGCGACTGTGATGGATATCAGCGGTCCTCTGGCCTACTCTTCGCTACTCGAAACCCGCTAT TCTCCCGATGGCAGCCAAGCACGTGGCACCTTAAATAACTGTGGTAATGGCTACACGCCTTGGGGCACTTACCTGACCTG TGAGGAAAATTGGCCAGGCTATTTTGCTAATCGTGGTAGCTTAACCGCCGATCAGAGTCGCATCGGGATCAGTAAAACCA GTACACGTTATGGCTGGGACGATCTTGCCGGACATGATGAAGAACGTCTCGATGAATTTGCCCGTTTCGATGTCACGCCA TCGGGCACAAGTGCTCAGGATGACTACCGTAACGAAGCAAACGGCCACGGTTATATTGTGGAAATCGACCCGTACAACGC CACCTCTCGTGCGGTAAAACGTACAGCACTTGGTCGTTTCCGCCATGAAGGTTGTACCTTTGGCAAATTGACCGAAGGCA AACCCGTGGTGTTCTATTCTGGCCACGATTCTCAATTCGAATACCTCTATAAATTTGTCTCGGCTGCGGCCTGGGATGCA AAGGATGCTGACAGCAGCAACCGCCTGCAAACAGGCGATAAGTACATGAATGAAGGAACTTTATATGCGGCTAGATTCAA TGAAAATGGTGGCGGTATTTGGTTGCCTTTGACGTTAGATAGCCAAACCACAGACGGCAAAACCTTAAGCGATAGCTTCG CAACTTTGGCCGATATTATTTTAAACACAGCGGGCGCAGCGGACCTAGTCGGCGCGACACCTATGGACCGACCTGAATGG TGCGCGGTCGATCCGTTCACGGGTTCAGCTTATTTGACCCTGACCAACAACTCGAAACGTACCGAAGCGAATCCTGCTAA CCCAAGATTGAAAAACTACTTCGGCCATATTATTCGTTGGGATGAAGGCGACAAAGCGACTGAATTTACATGGGATATTT TTGTTTTTGGATCACCCAGCGATGGCAATGCTGAGACCAACTTGTCAGGCTTAACCGATCTCAATCAATTTGCTAGCCCT GATGGGTTAGCCTTTGATAAACGTGGTATCTTGTGGGTTCAAACCGACAATGGCGCAAAGGAAGTTACCGAAGAAACCAA CGATCAAATGCTCGCGATAGTGCCTTCAACACTGGTGGATGGCCAAGAGAAACAAGTAAGCGTAACGGCCGATAATCAAA TGGAATTAAAGCGTTTCTTCGTCGGTCCCAACGACTGTGAAGTGACAGGTTTTGCCATTAGCCCTGATTACACTTCGGTA TTTGCTAACATTCAGCATCCAGGTAACTGGCCTTATTCGTCTAATGCCGCTGAACAAACGCCAGCCGGAGTCACATTACG GCCTCGCGCCGCCACTGTGGTTATTCGAAAATCAGATGGTAAAGAAGTTGCAGTTTAA
Upstream 100 bases:
>100_bases TATGTAAATTATTCCTGTAATATAAAATCAGCTTTATTGTCATATTGGTACTTTAGCCTTAGGCACGAAATTTAATTCAT CGTACTAGCCGGAGTAAAAT
Downstream 100 bases:
>100_bases GACGTTATTTAAGGAATATATTTGCTTTAGTTAAAGCGCAAATAATGCTTTCTTGCCAGAGCAAACTTTAGCCTATATAA AACTCCCCTCAAGTGAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLSAMTAFASVGLTACGSDNETVPKPVDPVTPVPPTKSSAKLN FTSVAGSRLDAVVVPEGYTAQVLAPWGTPLNAKAAPWKNDGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYI DEDALHPTGQTFDPTSGLRTVIDEVRKEINAHGVSVVRIKLMNNQWEVVINDGHNRRFTGATVMDISGPLAYSSLLETRY SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGSLTADQSRIGISKTSTRYGWDDLAGHDEERLDEFARFDVTP SGTSAQDDYRNEANGHGYIVEIDPYNATSRAVKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSAAAWDA KDADSSNRLQTGDKYMNEGTLYAARFNENGGGIWLPLTLDSQTTDGKTLSDSFATLADIILNTAGAADLVGATPMDRPEW CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNYFGHIIRWDEGDKATEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASP DGLAFDKRGILWVQTDNGAKEVTEETNDQMLAIVPSTLVDGQEKQVSVTADNQMELKRFFVGPNDCEVTGFAISPDYTSV FANIQHPGNWPYSSNAAEQTPAGVTLRPRAATVVIRKSDGKEVAV
Sequences:
>Translated_685_residues MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLSAMTAFASVGLTACGSDNETVPKPVDPVTPVPPTKSSAKLN FTSVAGSRLDAVVVPEGYTAQVLAPWGTPLNAKAAPWKNDGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYI DEDALHPTGQTFDPTSGLRTVIDEVRKEINAHGVSVVRIKLMNNQWEVVINDGHNRRFTGATVMDISGPLAYSSLLETRY SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGSLTADQSRIGISKTSTRYGWDDLAGHDEERLDEFARFDVTP SGTSAQDDYRNEANGHGYIVEIDPYNATSRAVKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSAAAWDA KDADSSNRLQTGDKYMNEGTLYAARFNENGGGIWLPLTLDSQTTDGKTLSDSFATLADIILNTAGAADLVGATPMDRPEW CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNYFGHIIRWDEGDKATEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASP DGLAFDKRGILWVQTDNGAKEVTEETNDQMLAIVPSTLVDGQEKQVSVTADNQMELKRFFVGPNDCEVTGFAISPDYTSV FANIQHPGNWPYSSNAAEQTPAGVTLRPRAATVVIRKSDGKEVAV >Mature_684_residues SKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLSAMTAFASVGLTACGSDNETVPKPVDPVTPVPPTKSSAKLNF TSVAGSRLDAVVVPEGYTAQVLAPWGTPLNAKAAPWKNDGSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYID EDALHPTGQTFDPTSGLRTVIDEVRKEINAHGVSVVRIKLMNNQWEVVINDGHNRRFTGATVMDISGPLAYSSLLETRYS PDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGSLTADQSRIGISKTSTRYGWDDLAGHDEERLDEFARFDVTPS GTSAQDDYRNEANGHGYIVEIDPYNATSRAVKRTALGRFRHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSAAAWDAK DADSSNRLQTGDKYMNEGTLYAARFNENGGGIWLPLTLDSQTTDGKTLSDSFATLADIILNTAGAADLVGATPMDRPEWC AVDPFTGSAYLTLTNNSKRTEANPANPRLKNYFGHIIRWDEGDKATEFTWDIFVFGSPSDGNAETNLSGLTDLNQFASPD GLAFDKRGILWVQTDNGAKEVTEETNDQMLAIVPSTLVDGQEKQVSVTADNQMELKRFFVGPNDCEVTGFAISPDYTSVF ANIQHPGNWPYSSNAAEQTPAGVTLRPRAATVVIRKSDGKEVAV
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74647; Mature: 74516
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLSAMTAFASVGLTACGSDNETV CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCC PKPVDPVTPVPPTKSSAKLNFTSVAGSRLDAVVVPEGYTAQVLAPWGTPLNAKAAPWKND CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCC GSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYIDEDALHPTGQTFDPTSGLRT CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH VIDEVRKEINAHGVSVVRIKLMNNQWEVVINDGHNRRFTGATVMDISGPLAYSSLLETRY HHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCEECCEEEEECCCCHHHHHHHHHCC SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGSLTADQSRIGISKTSTRYGWD CCCCHHCCCCHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCH DLAGHDEERLDEFARFDVTPSGTSAQDDYRNEANGHGYIVEIDPYNATSRAVKRTALGRF HHCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSAAAWDAKDADSSNRLQTGDKYMNEGT HHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCE LYAARFNENGGGIWLPLTLDSQTTDGKTLSDSFATLADIILNTAGAADLVGATPMDRPEW EEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCE CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNYFGHIIRWDEGDKATEFTWDIFVFGSPS EEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEEEEEEECCC DGNAETNLSGLTDLNQFASPDGLAFDKRGILWVQTDNGAKEVTEETNDQMLAIVPSTLVD CCCCCCCCCCCHHHHHHCCCCCCEECCCCEEEEECCCCHHHHHHCCCCCEEEEECHHHCC GQEKQVSVTADNQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSSNAAEQT CCCCEEEEECCCCEEEHHEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC PAGVTLRPRAATVVIRKSDGKEVAV CCCEEECCCEEEEEEECCCCCCCCC >Mature Secondary Structure SKATFDPTLYNKSNNEPFNQVLDKHLSRRNFVKSGLGLSAMTAFASVGLTACGSDNETV CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCCCC PKPVDPVTPVPPTKSSAKLNFTSVAGSRLDAVVVPEGYTAQVLAPWGTPLNAKAAPWKND CCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCC GSNTADDQANSVGMHHDGMHFFPLNDAGDDGLLCINHEYIDEDALHPTGQTFDPTSGLRT CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH VIDEVRKEINAHGVSVVRIKLMNNQWEVVINDGHNRRFTGATVMDISGPLAYSSLLETRY HHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCCCCEECCEEEEECCCCHHHHHHHHHCC SPDGSQARGTLNNCGNGYTPWGTYLTCEENWPGYFANRGSLTADQSRIGISKTSTRYGWD CCCCHHCCCCHHHCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHCCCCCCCCCCCCH DLAGHDEERLDEFARFDVTPSGTSAQDDYRNEANGHGYIVEIDPYNATSRAVKRTALGRF HHCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RHEGCTFGKLTEGKPVVFYSGHDSQFEYLYKFVSAAAWDAKDADSSNRLQTGDKYMNEGT HHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCE LYAARFNENGGGIWLPLTLDSQTTDGKTLSDSFATLADIILNTAGAADLVGATPMDRPEW EEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCE CAVDPFTGSAYLTLTNNSKRTEANPANPRLKNYFGHIIRWDEGDKATEFTWDIFVFGSPS EEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCEEEEEEEEEEECCC DGNAETNLSGLTDLNQFASPDGLAFDKRGILWVQTDNGAKEVTEETNDQMLAIVPSTLVD CCCCCCCCCCCHHHHHHCCCCCCEECCCCEEEEECCCCHHHHHHCCCCCEEEEECHHHCC GQEKQVSVTADNQMELKRFFVGPNDCEVTGFAISPDYTSVFANIQHPGNWPYSSNAAEQT CCCCEEEEECCCCEEEHHEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCC PAGVTLRPRAATVVIRKSDGKEVAV CCCEEECCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA