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The map label for this gene is yjjW [H]

Identifier: 126174286

GI number: 126174286

Start: 2396448

End: 2397350

Strand: Reverse

Name: yjjW [H]

Synonym: Sbal_2065

Alternate gene names: 126174286

Gene position: 2397350-2396448 (Counterclockwise)

Preceding gene: 126174287

Following gene: 126174282

Centisome position: 46.76

GC content: 48.17

Gene sequence:

>903_bases
ATGAGCACTCCCCTTGTGTCTTTGAATAGGCATGTAATGGTCAGTCAGCTATTACCCTTTTCCTGCGTTGACGGGCCTGG
CAGCAGGCTCGTGTTATTCCTGCAGGGCTGCAACTATCACTGCAAAAACTGCCATAACCCACAAACCATAGGCTTATGCG
ATGCCTGTGGCGATTGTGTTGCCACCTGCCCTGACAATGCGCTGACATTGATAAACCTCAATAATAAGCCTCGCATTCGC
TGGAATAGTGAGCGTTGTAGCCAATGCGATACCTGTCTTGCCGTATGCCCGAAACAAGCGAGCCCTAAGGTCACGCATTA
CACAGTTGAAGAAATACTAGGGATTCTGCACAGTCAGCGTCACTTTATTAATGGCATTACGGTGAGCGGCGGCGAAGCGA
GCCTGCAATTGCCGTTCATTATTGCGTTGTTTCAAGGGATTAAGGCCTCTGAATCGTTATCAAACTTGAGTTGTATGCTC
GATACCAATGGCAGTTTGAGTCTAACTGGTTGGCATAAACTGCTGCCCTTTTTAGATGGCGCTATGGTGGATCTTAAAGC
GTGGCAGCAGGATACCCATAGGTACATTACCGGTCGTGACGACCATGCAGTGTTCAAATCCATTCAGCTATTGGCGCAAC
AGCAAAAACTGTATGAAGTGAGATTGCTGCACATTCCGAGCATCACGGATTATGAACAGGAAATAGAAGCGCTGGCGACC
TATTTGCTTCAGCTTCAGCTAGGTGCGGATACACGGGTTAAATTAAACGCCTTTCACCACCATGGCGTTGTCGACGACGC
GTTAACGTGGCCAAGCTGCACACAAACCGATATTGAACGCTTGGCCGCAAAGCTTGCAAAGCGAGGCGTTACAAATCTTA
TCTTGCCCTCTTGCTATATTTAA

Upstream 100 bases:

>100_bases
GCGTTTAAGCAGTGCGGCTCACGCCTCAATACCACAGGCTTAGCCGCAGAAGCGGCAGTTAATACGGGGATATTGCAGCG
CCAAGCACGAGTCATAGCCC

Downstream 100 bases:

>100_bases
CGACTGCAAAGCAAAATTTGCTCGTAAAGCCAGCGCAGCGCGGGATCCTTCATGCTTTGTCGATGCCAAACGAGACTGTA
AGCCACTTTGCCATATTCTA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSTPLVSLNRHVMVSQLLPFSCVDGPGSRLVLFLQGCNYHCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIR
WNSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFQGIKASESLSNLSCML
DTNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRDDHAVFKSIQLLAQQQKLYEVRLLHIPSITDYEQEIEALAT
YLLQLQLGADTRVKLNAFHHHGVVDDALTWPSCTQTDIERLAAKLAKRGVTNLILPSCYI

Sequences:

>Translated_300_residues
MSTPLVSLNRHVMVSQLLPFSCVDGPGSRLVLFLQGCNYHCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIR
WNSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFQGIKASESLSNLSCML
DTNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRDDHAVFKSIQLLAQQQKLYEVRLLHIPSITDYEQEIEALAT
YLLQLQLGADTRVKLNAFHHHGVVDDALTWPSCTQTDIERLAAKLAKRGVTNLILPSCYI
>Mature_299_residues
STPLVSLNRHVMVSQLLPFSCVDGPGSRLVLFLQGCNYHCKNCHNPQTIGLCDACGDCVATCPDNALTLINLNNKPRIRW
NSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQRHFINGITVSGGEASLQLPFIIALFQGIKASESLSNLSCMLD
TNGSLSLTGWHKLLPFLDGAMVDLKAWQQDTHRYITGRDDHAVFKSIQLLAQQQKLYEVRLLHIPSITDYEQEIEALATY
LLQLQLGADTRVKLNAFHHHGVVDDALTWPSCTQTDIERLAAKLAKRGVTNLILPSCYI

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1790839, Length=292, Percent_Identity=52.0547945205479, Blast_Score=314, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011352
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 33265; Mature: 33134

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS01087 RADICAL_ACTIVATING ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLVSLNRHVMVSQLLPFSCVDGPGSRLVLFLQGCNYHCKNCHNPQTIGLCDACGDCV
CCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCHH
ATCPDNALTLINLNNKPRIRWNSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQR
HCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHH
HFINGITVSGGEASLQLPFIIALFQGIKASESLSNLSCMLDTNGSLSLTGWHKLLPFLDG
HHHCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCC
AMVDLKAWQQDTHRYITGRDDHAVFKSIQLLAQQQKLYEVRLLHIPSITDYEQEIEALAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
YLLQLQLGADTRVKLNAFHHHGVVDDALTWPSCTQTDIERLAAKLAKRGVTNLILPSCYI
HHHHHEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STPLVSLNRHVMVSQLLPFSCVDGPGSRLVLFLQGCNYHCKNCHNPQTIGLCDACGDCV
CCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHCCHH
ATCPDNALTLINLNNKPRIRWNSERCSQCDTCLAVCPKQASPKVTHYTVEEILGILHSQR
HCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHH
HFINGITVSGGEASLQLPFIIALFQGIKASESLSNLSCMLDTNGSLSLTGWHKLLPFLDG
HHHCCEEECCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCC
AMVDLKAWQQDTHRYITGRDDHAVFKSIQLLAQQQKLYEVRLLHIPSITDYEQEIEALAT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHH
YLLQLQLGADTRVKLNAFHHHGVVDDALTWPSCTQTDIERLAAKLAKRGVTNLILPSCYI
HHHHHEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]