| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is sam [H]
Identifier: 126174207
GI number: 126174207
Start: 2298804
End: 2299775
Strand: Reverse
Name: sam [H]
Synonym: Sbal_1983
Alternate gene names: 126174207
Gene position: 2299775-2298804 (Counterclockwise)
Preceding gene: 126174208
Following gene: 126174202
Centisome position: 44.85
GC content: 45.88
Gene sequence:
>972_bases ATGACTTCAGCGGACTGCTCCATCGAGCCAACACTCTTAAGTCGATACTTTTTCACAGACACTGTCTACACATGTTGGGA AGATATTTTGAATAATACAAAAGGTAGTCTGTTTATGGTGGCTGCGATGGCAGCATTTTCTATTGAAGACATGCTCATCA AATCTGCAGCAGAAACCACCTCTATCGGCCTCATTCTAGCGTTATTTGGCCTAGGTGGGATGTTGATTTTTATACTGTTA ACTTGGCGTAAGGGCGAAACTGTGCTTCACCCTGCGGCATTGTCGAGACCCATATTATTACGCGCACTGTGTGAAGTTAT CGGCCGATTCTGTTTTGCTTTAGCTATCACCTTAACGCCACTATCAAGTGCATCCGCTATTTTGCAAGCCACACCTCTAA TAGCCATGATTGGCGCCGCCTTGTTATTCGGTGAACAAGTAGGCCATAAAAGATGGCTTGCGGTATTAGTTGGTTTTGTG GGTGTGCTGATGATCATTCGCCCAGGGCTTGATGGCTTTGAAGCCACCTCTTTATTTGCCGTTATCGCTACCTTAGGTTT TGCAGGACGCGATTTAGCAACCCGTGCCGCATCACCCGTGTTATCTAACATGCAACTCGGGGTGTATGGCTTTTTTGTGT TAATTCCGACAGGCTTAGCCATAATGATGTACCAAAATGAGCCCTTACAGTTTAGTACCACTGCGGCAACACAAATTCTG GGAGCCATCGTCTTTGGTGTCATGGCCTACAATGCGCTGACAATCGCTATGCGCGCTGGAGATGTCTCAGTAGTCAGCCC CTTTCGGTATACACGTTTACTGTTTGCCTTAGCGTTAGGCATATTGATATTTGGAGAATCCCCAGACTTACTGACACTTC TAGGGAGCTTACTCATAGTATTAAGTGGCGGCTATACCTTAGTCCAAACGCGTAAAAGAACCACGACGAATAACATACCT AATGCGGCATGA
Upstream 100 bases:
>100_bases AAAGCCTGCTGTAGCGCGCATAAAATGCTGTTTAACTTAGAGCGCAGGATGTTTAACTCGAGTCACATGATGTTTAACTT GGGTCACAATAAGCTATACC
Downstream 100 bases:
>100_bases ACTGAGTAAAACAACAACGTAAGTTGAAATCTCGGCTAAATTCTTCTCGAGTAAACTGACTCGACGAGGCGCAGAAACAA GCGCGATACACTCAACACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTSADCSIEPTLLSRYFFTDTVYTCWEDILNNTKGSLFMVAAMAAFSIEDMLIKSAAETTSIGLILALFGLGGMLIFILL TWRKGETVLHPAALSRPILLRALCEVIGRFCFALAITLTPLSSASAILQATPLIAMIGAALLFGEQVGHKRWLAVLVGFV GVLMIIRPGLDGFEATSLFAVIATLGFAGRDLATRAASPVLSNMQLGVYGFFVLIPTGLAIMMYQNEPLQFSTTAATQIL GAIVFGVMAYNALTIAMRAGDVSVVSPFRYTRLLFALALGILIFGESPDLLTLLGSLLIVLSGGYTLVQTRKRTTTNNIP NAA
Sequences:
>Translated_323_residues MTSADCSIEPTLLSRYFFTDTVYTCWEDILNNTKGSLFMVAAMAAFSIEDMLIKSAAETTSIGLILALFGLGGMLIFILL TWRKGETVLHPAALSRPILLRALCEVIGRFCFALAITLTPLSSASAILQATPLIAMIGAALLFGEQVGHKRWLAVLVGFV GVLMIIRPGLDGFEATSLFAVIATLGFAGRDLATRAASPVLSNMQLGVYGFFVLIPTGLAIMMYQNEPLQFSTTAATQIL GAIVFGVMAYNALTIAMRAGDVSVVSPFRYTRLLFALALGILIFGESPDLLTLLGSLLIVLSGGYTLVQTRKRTTTNNIP NAA >Mature_322_residues TSADCSIEPTLLSRYFFTDTVYTCWEDILNNTKGSLFMVAAMAAFSIEDMLIKSAAETTSIGLILALFGLGGMLIFILLT WRKGETVLHPAALSRPILLRALCEVIGRFCFALAITLTPLSSASAILQATPLIAMIGAALLFGEQVGHKRWLAVLVGFVG VLMIIRPGLDGFEATSLFAVIATLGFAGRDLATRAASPVLSNMQLGVYGFFVLIPTGLAIMMYQNEPLQFSTTAATQILG AIVFGVMAYNALTIAMRAGDVSVVSPFRYTRLLFALALGILIFGESPDLLTLLGSLLIVLSGGYTLVQTRKRTTTNNIPN AA
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34520; Mature: 34388
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSADCSIEPTLLSRYFFTDTVYTCWEDILNNTKGSLFMVAAMAAFSIEDMLIKSAAETT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SIGLILALFGLGGMLIFILLTWRKGETVLHPAALSRPILLRALCEVIGRFCFALAITLTP HHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC LSSASAILQATPLIAMIGAALLFGEQVGHKRWLAVLVGFVGVLMIIRPGLDGFEATSLFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VIATLGFAGRDLATRAASPVLSNMQLGVYGFFVLIPTGLAIMMYQNEPLQFSTTAATQIL HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHH GAIVFGVMAYNALTIAMRAGDVSVVSPFRYTRLLFALALGILIFGESPDLLTLLGSLLIV HHHHHHHHHHHHHHEEEECCCEEEECHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH LSGGYTLVQTRKRTTTNNIPNAA HCCCCCEEEECHHHCCCCCCCCC >Mature Secondary Structure TSADCSIEPTLLSRYFFTDTVYTCWEDILNNTKGSLFMVAAMAAFSIEDMLIKSAAETT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SIGLILALFGLGGMLIFILLTWRKGETVLHPAALSRPILLRALCEVIGRFCFALAITLTP HHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC LSSASAILQATPLIAMIGAALLFGEQVGHKRWLAVLVGFVGVLMIIRPGLDGFEATSLFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VIATLGFAGRDLATRAASPVLSNMQLGVYGFFVLIPTGLAIMMYQNEPLQFSTTAATQIL HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHH GAIVFGVMAYNALTIAMRAGDVSVVSPFRYTRLLFALALGILIFGESPDLLTLLGSLLIV HHHHHHHHHHHHHHEEEECCCEEEECHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH LSGGYTLVQTRKRTTTNNIPNAA HCCCCCEEEECHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA