| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174202
Identifier: 126174202
GI number: 126174202
Start: 2291959
End: 2292393
Strand: Reverse
Name: 126174202
Synonym: Sbal_1978
Alternate gene names: NA
Gene position: 2292393-2291959 (Counterclockwise)
Preceding gene: 126174207
Following gene: 126174168
Centisome position: 44.71
GC content: 41.15
Gene sequence:
>435_bases ATGCGTCAAATTCTATTAATCAATACATTTTGTTTAGTGTTTTTTATCACTCCATTTACAACTAGTGCACAAAATACTGA TACTGCGGGTATTAATGTTGAAAAACTACTTGAAACAGAACAATCTTGGGATGGAGTGGTTTATAAGGAATACCCCAAGG GAACTCCGCAGCTGTCAGTGCTTAGAATTACTGTTGCACCAAATACGAGTCTTGCTTGGCATGAACACCCGGTACCCAAT GCTGCTTATGTGTTGAGTGGGATATTAACAGTGGAAAAAAGATCTACTGGCGAAAAACGTGTTTTGACAGCGGGTGAGGT ATTGCCAGAGATGGTTGGCAGCGCTCATCGCGGTTATACAGGTAAAGAAGGCGTTACACTTGTGGTTTTCTATGCAGGGC AAAAAGAACTCCCGCTTTCTAAATCCGTTGAATAA
Upstream 100 bases:
>100_bases GAGACATTAGCCAGTAATAATAGTTTATGACCTTATTTCCCAATGTTATTATTGGTTTTTTTAATAAGCGATTAACGCTA ACTAGGGACAACGAGACAGC
Downstream 100 bases:
>100_bases CAATGGTCTTTGAGTCTAATTGTAGTGCTCTAAAAAAATAGGTCAGTTTGATAGAAGCGATACCAATTACATTGCACATT GTTAATTTGAAAAAAATTCT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Cupin Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; Lipoprotein
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRQILLINTFCLVFFITPFTTSAQNTDTAGINVEKLLETEQSWDGVVYKEYPKGTPQLSVLRITVAPNTSLAWHEHPVPN AAYVLSGILTVEKRSTGEKRVLTAGEVLPEMVGSAHRGYTGKEGVTLVVFYAGQKELPLSKSVE
Sequences:
>Translated_144_residues MRQILLINTFCLVFFITPFTTSAQNTDTAGINVEKLLETEQSWDGVVYKEYPKGTPQLSVLRITVAPNTSLAWHEHPVPN AAYVLSGILTVEKRSTGEKRVLTAGEVLPEMVGSAHRGYTGKEGVTLVVFYAGQKELPLSKSVE >Mature_144_residues MRQILLINTFCLVFFITPFTTSAQNTDTAGINVEKLLETEQSWDGVVYKEYPKGTPQLSVLRITVAPNTSLAWHEHPVPN AAYVLSGILTVEKRSTGEKRVLTAGEVLPEMVGSAHRGYTGKEGVTLVVFYAGQKELPLSKSVE
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15823; Mature: 15823
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQILLINTFCLVFFITPFTTSAQNTDTAGINVEKLLETEQSWDGVVYKEYPKGTPQLSV CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEE LRITVAPNTSLAWHEHPVPNAAYVLSGILTVEKRSTGEKRVLTAGEVLPEMVGSAHRGYT EEEEECCCCCEEECCCCCCCHHHHHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCC GKEGVTLVVFYAGQKELPLSKSVE CCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRQILLINTFCLVFFITPFTTSAQNTDTAGINVEKLLETEQSWDGVVYKEYPKGTPQLSV CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCEEE LRITVAPNTSLAWHEHPVPNAAYVLSGILTVEKRSTGEKRVLTAGEVLPEMVGSAHRGYT EEEEECCCCCEEECCCCCCCHHHHHHHHEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCC GKEGVTLVVFYAGQKELPLSKSVE CCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA