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The map label for this gene is 126174180

Identifier: 126174180

GI number: 126174180

Start: 2271493

End: 2271972

Strand: Direct

Name: 126174180

Synonym: Sbal_1956

Alternate gene names: NA

Gene position: 2271493-2271972 (Clockwise)

Preceding gene: 126174179

Following gene: 126174181

Centisome position: 44.3

GC content: 46.04

Gene sequence:

>480_bases
ATGATAAATAATGAAATTGAATTAGATTTTGAAAAGCTTGAAGCTGCCTGCCAGTTAGCTTTAGTGAATCAACAGACCTT
AGCTGAACAAGTGGGTTTAACGAGCCAAGATCTCGAGCAAACTTACCAATCTGGCACGAGTAAATATCAGATGGGCTTGC
CCGCAGAAGCGATTGTCGATTTTACCTATTTGGTCATGCATCAGCCTTGGGATAGACGCTTTCATCTTGGACTGGGGTCT
TGCCTACATTGGCTAGGTGAATACCAGCATGCCTTGACCTTCTATGGTTATGCACTCGTGATGGATGCCTGCTCTCCCGA
CGCGAGTTTCCGTATTGCGCAGTGCTTTCTGAGCTTAAATGATGACGCCGCGGCAATCGAAGCGTTACAGATGGCCATCT
CACAGAGCTTCAGTAAGCCAGAGCACCATTTTGTGGGGGAGCAAGCACAGCAATTGCTTAGTGCTCTTAATAATCAATAG

Upstream 100 bases:

>100_bases
CGAATTAGCATCATCTTTTTTCATATTAATTAATGGATTTTCGCCTTGTCGAGTGGAACGCCATCAATGCATTCAAATTG
AACCACTAAAGGTACCCAAA

Downstream 100 bases:

>100_bases
ATAATAGGATTTGCAATCATCATTTATATTATTGAAAGAGGTTTATTATGAATGAGTTAACACATGTTTCTTTATCATCC
CCGACTTTAAGCGGTTTAGA

Product: type III secretion low calcium response chaperone LcrH/SycD

Products: NA

Alternate protein names: Type III Secretion Chaperone SycD/LcrH; Type III Secretion System Chaperone Protein B; Type III Secretion Low Calcium Response Chaperone LcrH/SycD; Pathogenicity Island Protein

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLEQTYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALVMDACSPDASFRIAQCFLSLNDDAAAIEALQMAISQSFSKPEHHFVGEQAQQLLSALNNQ

Sequences:

>Translated_159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLEQTYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALVMDACSPDASFRIAQCFLSLNDDAAAIEALQMAISQSFSKPEHHFVGEQAQQLLSALNNQ
>Mature_159_residues
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLEQTYQSGTSKYQMGLPAEAIVDFTYLVMHQPWDRRFHLGLGS
CLHWLGEYQHALTFYGYALVMDACSPDASFRIAQCFLSLNDDAAAIEALQMAISQSFSKPEHHFVGEQAQQLLSALNNQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17834; Mature: 17834

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLEQTYQSGTSKYQMGLPAEAIVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCHHHHHH
FTYLVMHQPWDRRFHLGLGSCLHWLGEYQHALTFYGYALVMDACSPDASFRIAQCFLSLN
HHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DDAAAIEALQMAISQSFSKPEHHFVGEQAQQLLSALNNQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINNEIELDFEKLEAACQLALVNQQTLAEQVGLTSQDLEQTYQSGTSKYQMGLPAEAIVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCHHHHHH
FTYLVMHQPWDRRFHLGLGSCLHWLGEYQHALTFYGYALVMDACSPDASFRIAQCFLSLN
HHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DDAAAIEALQMAISQSFSKPEHHFVGEQAQQLLSALNNQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA