| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174179
Identifier: 126174179
GI number: 126174179
Start: 2269655
End: 2271280
Strand: Direct
Name: 126174179
Synonym: Sbal_1955
Alternate gene names: NA
Gene position: 2269655-2271280 (Clockwise)
Preceding gene: 126174178
Following gene: 126174180
Centisome position: 44.27
GC content: 46.31
Gene sequence:
>1626_bases ATGACTGTCGAAGTTGCATTGGGTAGGCAACATACCTACCACTTTAACGAGAGCCGCTTAGAGCGGGTTCTCACCGCCAA CACTTTAGATGAAGCTGGGAAAATGGGCTTACTGGACAAAATACTCGATTGGTTTCGTGGTGGCGTGAAACTCGAAGCGA TAAAAGCTTTATATCAGCAAGTAACCGAGCCTGGCGATCTCACTCCTTCCCAAGTGGCAAAAAGATTTTGTGCATTACGT AATCTAGCGGTCGATCAGCATCAAGCAAAATTTACATTGGCTCTAGGCGACAATGGTGAGCAGTGGCGTATGTTGCTAAG TATTGGTGGCCGAACAATTTATCAAACGGATAACCGCGATATAGACACGCATTTCTATCAAGTTGCCGCAGTAAAAACCA CAATAACGGCCAGTGATGACCTACGAAAAATGGCCTCTGCACTCACGCTGGAAAAATACATTGAAGGTAATATTCAATGT ATGTCTGACAATCAAGCTGTACAGCAAGCCTTGCGAAATAGCTTGGCAGATCCTCGCTTTAGCAGTGAACTGTTTACTGG AGTCCTCCCCAATGACAGCGAAGCCGCGACCTTTGTCGCTCAATTTGGCGATCTTCAGTGGACGTTTTCCAATCGCGCCG AAACAAATGGCGAGTTCCGAGGTGAATTGCTTAAAAAGGCTTTATATTCAGGTGATTATAAAAATCTCGGTGACTTAGCG GCCAACGGTTTTATGAGCAGTGAGGACAATTCATTGCGTTATGCCGTCACACCGTCTCGCTACGAATTACTCAATTGCGT AGCGGCTCATGGCATGGAGGACGAAGGGCTCACACGAGTGTTATACCAGGCCAAAGTAGGCAATACCAATTTAGGGGCTC TTTATGGTTTACCCGCCCCCAAAGATGCACCGCAGCTAGACAATGTTGATGATTTTATCTTATGCGACGAGGATATTAAT CTTGGCGTATCCCAAACGGATGTATATGCCGATGAAGCGACATTCTACCAAGGCATAGGGCAGCATCAAACCACCACTAC AGGTGATAACTGCTATAAATTACTTCAGCTGAATATCAATGAAGGCTTGCATTATCTCGCGACTAAAGCTAACCCGCATA AGCTGCAAGGAGGCATGCAGAACGTCTTTGATTACCTTGTTGGACGCAACTCAGGTGCGATTGCACTACGTAATTGTATA ACCTGCGCTAAGGCTGTCGATGTCAATATGGGACTCATGTTGGCTCGACAAAATGATAGCGTCGTTCCGCTCAAGTTTTG GGAAGCGATAGATACGAGAGCTGGTGTTATTAGTCAAGTTACGGCTCAGAGTCAAACGATAGGGATATTGCCTGAACAGT CAGTCTCTTCGTTACTATTGAGCGCCTTGCCCCAAGGACAGCGGGCAATAATTACAGTACCTGTCAGTGGGGAAAAAGAC TCCCATGCCATGAACTTGTTTCACTTCGATTCGGGTCAATGTTTTTTGGTCGATGGACAAAATGGCAAAAGCTATGATCT TCAGCACCCTGCAGATCGCACCGCGTTAGATAGCCAATATAATGCTCAGGGCCGAGACCTCGCGCCGATCATGCTCCATA CCACAGGAGACTTGCCGAATTTTTAA
Upstream 100 bases:
>100_bases ACAAGGCGCCAAGGAAGTTAATCAGAATGGCGAGACTTGGTTGGTTTACTAGGTCAAATAAACGCTGTTCATGAGCGTGG TCACTTAAGAGGCAAAAAAT
Downstream 100 bases:
>100_bases GCCAATGAATAAGGTATGCAATCGGAGAGTTCACGATTTTCTAAGCTATTCAGACACAAGCATTGCAATCCGATTTGATA CGCCTATTGGCTAATATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MTVEVALGRQHTYHFNESRLERVLTANTLDEAGKMGLLDKILDWFRGGVKLEAIKALYQQVTEPGDLTPSQVAKRFCALR NLAVDQHQAKFTLALGDNGEQWRMLLSIGGRTIYQTDNRDIDTHFYQVAAVKTTITASDDLRKMASALTLEKYIEGNIQC MSDNQAVQQALRNSLADPRFSSELFTGVLPNDSEAATFVAQFGDLQWTFSNRAETNGEFRGELLKKALYSGDYKNLGDLA ANGFMSSEDNSLRYAVTPSRYELLNCVAAHGMEDEGLTRVLYQAKVGNTNLGALYGLPAPKDAPQLDNVDDFILCDEDIN LGVSQTDVYADEATFYQGIGQHQTTTTGDNCYKLLQLNINEGLHYLATKANPHKLQGGMQNVFDYLVGRNSGAIALRNCI TCAKAVDVNMGLMLARQNDSVVPLKFWEAIDTRAGVISQVTAQSQTIGILPEQSVSSLLLSALPQGQRAIITVPVSGEKD SHAMNLFHFDSGQCFLVDGQNGKSYDLQHPADRTALDSQYNAQGRDLAPIMLHTTGDLPNF
Sequences:
>Translated_541_residues MTVEVALGRQHTYHFNESRLERVLTANTLDEAGKMGLLDKILDWFRGGVKLEAIKALYQQVTEPGDLTPSQVAKRFCALR NLAVDQHQAKFTLALGDNGEQWRMLLSIGGRTIYQTDNRDIDTHFYQVAAVKTTITASDDLRKMASALTLEKYIEGNIQC MSDNQAVQQALRNSLADPRFSSELFTGVLPNDSEAATFVAQFGDLQWTFSNRAETNGEFRGELLKKALYSGDYKNLGDLA ANGFMSSEDNSLRYAVTPSRYELLNCVAAHGMEDEGLTRVLYQAKVGNTNLGALYGLPAPKDAPQLDNVDDFILCDEDIN LGVSQTDVYADEATFYQGIGQHQTTTTGDNCYKLLQLNINEGLHYLATKANPHKLQGGMQNVFDYLVGRNSGAIALRNCI TCAKAVDVNMGLMLARQNDSVVPLKFWEAIDTRAGVISQVTAQSQTIGILPEQSVSSLLLSALPQGQRAIITVPVSGEKD SHAMNLFHFDSGQCFLVDGQNGKSYDLQHPADRTALDSQYNAQGRDLAPIMLHTTGDLPNF >Mature_540_residues TVEVALGRQHTYHFNESRLERVLTANTLDEAGKMGLLDKILDWFRGGVKLEAIKALYQQVTEPGDLTPSQVAKRFCALRN LAVDQHQAKFTLALGDNGEQWRMLLSIGGRTIYQTDNRDIDTHFYQVAAVKTTITASDDLRKMASALTLEKYIEGNIQCM SDNQAVQQALRNSLADPRFSSELFTGVLPNDSEAATFVAQFGDLQWTFSNRAETNGEFRGELLKKALYSGDYKNLGDLAA NGFMSSEDNSLRYAVTPSRYELLNCVAAHGMEDEGLTRVLYQAKVGNTNLGALYGLPAPKDAPQLDNVDDFILCDEDINL GVSQTDVYADEATFYQGIGQHQTTTTGDNCYKLLQLNINEGLHYLATKANPHKLQGGMQNVFDYLVGRNSGAIALRNCIT CAKAVDVNMGLMLARQNDSVVPLKFWEAIDTRAGVISQVTAQSQTIGILPEQSVSSLLLSALPQGQRAIITVPVSGEKDS HAMNLFHFDSGQCFLVDGQNGKSYDLQHPADRTALDSQYNAQGRDLAPIMLHTTGDLPNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59502; Mature: 59370
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEVALGRQHTYHFNESRLERVLTANTLDEAGKMGLLDKILDWFRGGVKLEAIKALYQQ CEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH VTEPGDLTPSQVAKRFCALRNLAVDQHQAKFTLALGDNGEQWRMLLSIGGRTIYQTDNRD HCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHEEEEEEECCEEEEECCCCC IDTHFYQVAAVKTTITASDDLRKMASALTLEKYIEGNIQCMSDNQAVQQALRNSLADPRF CCHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCC SSELFTGVLPNDSEAATFVAQFGDLQWTFSNRAETNGEFRGELLKKALYSGDYKNLGDLA CHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH ANGFMSSEDNSLRYAVTPSRYELLNCVAAHGMEDEGLTRVLYQAKVGNTNLGALYGLPAP HCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCCCC KDAPQLDNVDDFILCDEDINLGVSQTDVYADEATFYQGIGQHQTTTTGDNCYKLLQLNIN CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECC EGLHYLATKANPHKLQGGMQNVFDYLVGRNSGAIALRNCITCAKAVDVNMGLMLARQNDS CCCEEEEECCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC VVPLKFWEAIDTRAGVISQVTAQSQTIGILPEQSVSSLLLSALPQGQRAIITVPVSGEKD EEEEHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCC SHAMNLFHFDSGQCFLVDGQNGKSYDLQHPADRTALDSQYNAQGRDLAPIMLHTTGDLPN CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCC F C >Mature Secondary Structure TVEVALGRQHTYHFNESRLERVLTANTLDEAGKMGLLDKILDWFRGGVKLEAIKALYQQ EEEEEECCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH VTEPGDLTPSQVAKRFCALRNLAVDQHQAKFTLALGDNGEQWRMLLSIGGRTIYQTDNRD HCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHEEEEEEECCEEEEECCCCC IDTHFYQVAAVKTTITASDDLRKMASALTLEKYIEGNIQCMSDNQAVQQALRNSLADPRF CCHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCC SSELFTGVLPNDSEAATFVAQFGDLQWTFSNRAETNGEFRGELLKKALYSGDYKNLGDLA CHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH ANGFMSSEDNSLRYAVTPSRYELLNCVAAHGMEDEGLTRVLYQAKVGNTNLGALYGLPAP HCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEECCCCC KDAPQLDNVDDFILCDEDINLGVSQTDVYADEATFYQGIGQHQTTTTGDNCYKLLQLNIN CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECC EGLHYLATKANPHKLQGGMQNVFDYLVGRNSGAIALRNCITCAKAVDVNMGLMLARQNDS CCCEEEEECCCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC VVPLKFWEAIDTRAGVISQVTAQSQTIGILPEQSVSSLLLSALPQGQRAIITVPVSGEKD EEEEHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCC SHAMNLFHFDSGQCFLVDGQNGKSYDLQHPADRTALDSQYNAQGRDLAPIMLHTTGDLPN CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA