| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174164
Identifier: 126174164
GI number: 126174164
Start: 2254940
End: 2255173
Strand: Direct
Name: 126174164
Synonym: Sbal_1940
Alternate gene names: NA
Gene position: 2254940-2255173 (Clockwise)
Preceding gene: 126174163
Following gene: 126174165
Centisome position: 43.98
GC content: 43.16
Gene sequence:
>234_bases TTGCAGCGATTGAAGATGATCAAGCATGCCAAAATGCTTGGGTTTACGCTGAGTGAAATCGCAGATGTATTAACTGTGTG GATCGAGGATGAATTCAGTGTTGCTCAAAAGCGCGCATGTCTTGAGCGAAAATTAATACAAATTGAAGAAAAAGAGTTGG CGTTGAAGGAGCTGCGGGCTGGCATTAACAATGCACTCTTTAAAGTTGGTCTCCCGTGTGACGATGCTTTCTAA
Upstream 100 bases:
>100_bases CGATGCCGATCAGATCTGCGGCTACGGTTTTAGTTCAACCTATTTAGGAAACAAAGCCCCTAATGTTAGCAATAACTATA AAGTTTATTCTGCTGTAGAT
Downstream 100 bases:
>100_bases ATGTTTGGAATATTACTCGTTGTTCTGCTACACGTGTGGATTAATGAATATTTTTGGCGATGCAGTATGCGTAGCAAAAT CGCACCAGACAAAACCTAAA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MQRLKMIKHAKMLGFTLSEIADVLTVWIEDEFSVAQKRACLERKLIQIEEKELALKELRAGINNALFKVGLPCDDAF
Sequences:
>Translated_77_residues MQRLKMIKHAKMLGFTLSEIADVLTVWIEDEFSVAQKRACLERKLIQIEEKELALKELRAGINNALFKVGLPCDDAF >Mature_77_residues MQRLKMIKHAKMLGFTLSEIADVLTVWIEDEFSVAQKRACLERKLIQIEEKELALKELRAGINNALFKVGLPCDDAF
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8820; Mature: 8820
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLKMIKHAKMLGFTLSEIADVLTVWIEDEFSVAQKRACLERKLIQIEEKELALKELRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GINNALFKVGLPCDDAF HHHHHHHHCCCCCCCCC >Mature Secondary Structure MQRLKMIKHAKMLGFTLSEIADVLTVWIEDEFSVAQKRACLERKLIQIEEKELALKELRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GINNALFKVGLPCDDAF HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA