| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174042
Identifier: 126174042
GI number: 126174042
Start: 2106724
End: 2107554
Strand: Reverse
Name: 126174042
Synonym: Sbal_1815
Alternate gene names: NA
Gene position: 2107554-2106724 (Counterclockwise)
Preceding gene: 126174047
Following gene: 126174024
Centisome position: 41.1
GC content: 43.08
Gene sequence:
>831_bases ATGGTAATAAGACAGTTGTATCGTCTACTCTTTAGTTTCATTTTAGGGATCAGCGTATTTTCGGCCGCTATCGCCCAAGA TAAAAGTCTGTCGCCCACAGCACCTAATACAATAGTACCCAATACAATACCGACCATTCATGTCGGTGGTTATCAATTTT CTCCCTATGTAAATCTACAACAGGACGGCCGCTACACAGGCCTCACCCTCGATATCATTAATGCATTGAATCAAATACAA CAAGAAGTGTTTTTTGAATTTACCGTCACCAGTGTTGAGCACAGATATAAAGCCTATGCCTTAGGTCGCTTCTACATGAT GATATTTGAGAATCCCGCTTGGGGATGGCAGAAAATAGCGGATCAGTTTATTCCACTACACATGATAGATGGGGAAGTGT TTATTGCGCTTAAGGCCAAAGCCCATAATCAAAATTATTTCAAAAACTTAACCAATAAGTCAGTCGCATTCGTTAAGGGC TATCACTATCAGTTTGCCCACTTTGAAACCGATGCTGACAAGTTGGCAAAGCAATTTCGCCCCTTGTTCGTCAGTAACAA CAGGGCATCAATCGAAAGCATTCTGCGCGAACGGGCAGACATAGCGCCCGTCACTCATTCCTATTTGCAGTATTATTTAA AGGTGAATCCACAAGACAGGCATTTACTTTTAATCTCAGACAAATGGGACCAAGAGTACGATAACGGCATCTTACTTAGC CTCAGATCATCACTCGATGCTAAAAAGCTTCCACACTGGGTTCAGCTGCTCATCGACAATGGCAAACTGGCCGAACTCGC CGCCCAATACGGGATTAAGTCGAGCCAATAA
Upstream 100 bases:
>100_bases ATGACCTATTCAAAATTCGCACAATATCGACAGCGTTGAGTAAATTAAATTGTGTATACTTGTAAAAAATCATTAACCTT TGGCATGATTAGGGGTGACC
Downstream 100 bases:
>100_bases TTCGCTTTTCTTCAAACCGTTCACGCTTTAAGCGCGACGATTATCCAAAAGCGATCAGCGATTTAGGCGACGGACAAGAG TGGTCCCAGCATAGCCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MVIRQLYRLLFSFILGISVFSAAIAQDKSLSPTAPNTIVPNTIPTIHVGGYQFSPYVNLQQDGRYTGLTLDIINALNQIQ QEVFFEFTVTSVEHRYKAYALGRFYMMIFENPAWGWQKIADQFIPLHMIDGEVFIALKAKAHNQNYFKNLTNKSVAFVKG YHYQFAHFETDADKLAKQFRPLFVSNNRASIESILRERADIAPVTHSYLQYYLKVNPQDRHLLLISDKWDQEYDNGILLS LRSSLDAKKLPHWVQLLIDNGKLAELAAQYGIKSSQ
Sequences:
>Translated_276_residues MVIRQLYRLLFSFILGISVFSAAIAQDKSLSPTAPNTIVPNTIPTIHVGGYQFSPYVNLQQDGRYTGLTLDIINALNQIQ QEVFFEFTVTSVEHRYKAYALGRFYMMIFENPAWGWQKIADQFIPLHMIDGEVFIALKAKAHNQNYFKNLTNKSVAFVKG YHYQFAHFETDADKLAKQFRPLFVSNNRASIESILRERADIAPVTHSYLQYYLKVNPQDRHLLLISDKWDQEYDNGILLS LRSSLDAKKLPHWVQLLIDNGKLAELAAQYGIKSSQ >Mature_276_residues MVIRQLYRLLFSFILGISVFSAAIAQDKSLSPTAPNTIVPNTIPTIHVGGYQFSPYVNLQQDGRYTGLTLDIINALNQIQ QEVFFEFTVTSVEHRYKAYALGRFYMMIFENPAWGWQKIADQFIPLHMIDGEVFIALKAKAHNQNYFKNLTNKSVAFVKG YHYQFAHFETDADKLAKQFRPLFVSNNRASIESILRERADIAPVTHSYLQYYLKVNPQDRHLLLISDKWDQEYDNGILLS LRSSLDAKKLPHWVQLLIDNGKLAELAAQYGIKSSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31728; Mature: 31728
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRQLYRLLFSFILGISVFSAAIAQDKSLSPTAPNTIVPNTIPTIHVGGYQFSPYVNLQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEECCEEEEC QDGRYTGLTLDIINALNQIQQEVFFEFTVTSVEHRYKAYALGRFYMMIFENPAWGWQKIA CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHH DQFIPLHMIDGEVFIALKAKAHNQNYFKNLTNKSVAFVKGYHYQFAHFETDADKLAKQFR HHCCCEEEECCEEEEEEEECCCCCHHHHHCCCCCEEEEECCEEEEEEECCCHHHHHHHHC PLFVSNNRASIESILRERADIAPVTHSYLQYYLKVNPQDRHLLLISDKWDQEYDNGILLS CEEEECCHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCEEEE LRSSLDAKKLPHWVQLLIDNGKLAELAAQYGIKSSQ EHHCCCHHHCCHHHHEEECCCHHHHHHHHCCCCCCC >Mature Secondary Structure MVIRQLYRLLFSFILGISVFSAAIAQDKSLSPTAPNTIVPNTIPTIHVGGYQFSPYVNLQ CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEECCEEEEC QDGRYTGLTLDIINALNQIQQEVFFEFTVTSVEHRYKAYALGRFYMMIFENPAWGWQKIA CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHH DQFIPLHMIDGEVFIALKAKAHNQNYFKNLTNKSVAFVKGYHYQFAHFETDADKLAKQFR HHCCCEEEECCEEEEEEEECCCCCHHHHHCCCCCEEEEECCEEEEEEECCCHHHHHHHHC PLFVSNNRASIESILRERADIAPVTHSYLQYYLKVNPQDRHLLLISDKWDQEYDNGILLS CEEEECCHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCEEEE LRSSLDAKKLPHWVQLLIDNGKLAELAAQYGIKSSQ EHHCCCHHHCCHHHHEEECCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA