| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yaiI [C]
Identifier: 126173998
GI number: 126173998
Start: 2062061
End: 2062513
Strand: Direct
Name: yaiI [C]
Synonym: Sbal_1771
Alternate gene names: 126173998
Gene position: 2062061-2062513 (Clockwise)
Preceding gene: 126173997
Following gene: 126173999
Centisome position: 40.22
GC content: 50.11
Gene sequence:
>453_bases TTGAGTGATTATAAAATTTGGGTTGATGCGGACGCATGCCCTAATCCCATTAAAGAAATCCTGTTCCGCGCGGCGGAGCG TAAAGCTTTGCCGCTGGTGCTGGTGGCCAATCAAATGATCCGTGTACCGCCATCGCCCTATATCAACCAAATTCGCGTTG GTGCGGGTTTTGATGTGGCGGATCAATACATTGTCGACCATGTCGAGCCGACGCATTTAGTGATCACCGCGGACATTCCC TTAGCGGCTTTAATCATCGAAAAGGGCGCCTTGGCACTCAATCCCCGCGGCGAGCTTTATACCGTCGATAACATAAAACA AAAGCTGACGATGCGCGATTTTATGGAAGATTTGCGGGGTTCAGGTGTGCACACCGGCGGGCCGGATTCGTTTTCCCAAG CGGATAAACAGGCTTTTGCCAATAGCTTAGATAAATGGCTCGTTAGAGTATGA
Upstream 100 bases:
>100_bases GTGGGAAATCGATCGTTTAGCGCCATAATACGCGCATAGTTCTGCATAGTATTGCCTAAAACTAAGCCTGTGAACCTAAC ACCAACAGAGTTAAAAGACA
Downstream 100 bases:
>100_bases AGCATAGTTTACTGGTCGCTAATGGATAAAAAGAGTATCTTTAGCTTAAGTTAGGTGATGTGGGTCACGTTTAACTGGAC AGGATTTTCGCCTGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVDHVEPTHLVITADIP LAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV
Sequences:
>Translated_150_residues MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVDHVEPTHLVITADIP LAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV >Mature_149_residues SDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVADQYIVDHVEPTHLVITADIPL AALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRGSGVHTGGPDSFSQADKQAFANSLDKWLVRV
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=145, Percent_Identity=68.9655172413793, Blast_Score=206, Evalue=7e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1771_SHEB5 (A3D3G5)
Other databases:
- EMBL: CP000563 - RefSeq: YP_001050147.1 - STRING: A3D3G5 - GeneID: 4844498 - GenomeReviews: CP000563_GR - KEGG: sbl:Sbal_1771 - NMPDR: fig|325240.3.peg.3770 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: A3D3G5 - ProtClustDB: CLSK906919 - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16641; Mature: 16510
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVA CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCEEECCCCCCHH DQYIVDHVEPTHLVITADIPLAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRG HHHHHHCCCCCEEEEEECCCCEEHHHHCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCC SGVHTGGPDSFSQADKQAFANSLDKWLVRV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDYKIWVDADACPNPIKEILFRAAERKALPLVLVANQMIRVPPSPYINQIRVGAGFDVA CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCEEECCCCCCHH DQYIVDHVEPTHLVITADIPLAALIIEKGALALNPRGELYTVDNIKQKLTMRDFMEDLRG HHHHHHCCCCCEEEEEECCCCEEHHHHCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHCC SGVHTGGPDSFSQADKQAFANSLDKWLVRV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA