| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is f1pep1 [H]
Identifier: 126173970
GI number: 126173970
Start: 2025720
End: 2027903
Strand: Direct
Name: f1pep1 [H]
Synonym: Sbal_1741
Alternate gene names: 126173970
Gene position: 2025720-2027903 (Clockwise)
Preceding gene: 126173969
Following gene: 126173971
Centisome position: 39.51
GC content: 44.73
Gene sequence:
>2184_bases ATGGCATTAAGATTTCGCCTTGCAAAGCAAGGTTTGTTAGTGGCCACATTGGGAATGGCACTCGGTGCCTGCCAAAGTGG CAATGCACCTGAACAAAATTCGACTGAGCAGGCAAGCGCAAATAAATTGGTTTACCCTGTGACTCAAAAAGATGATCTCG TCGAAACCATTCACGGTGTTACCGTGGCGGACCCTTACCGCCACTTAGAAGCCAATACGCCAGAAACGGAAGCTTGGGTA AAAGAACAACAAGCCTTCGGTCAAGCCTATTTAGCCAAGATCCCCAATAAACAAGCTGTGGTCGATCGCATCACAGAACT GTGGAATTACGAAAAAGTCTCGGCCCCATTTGAGAATGGCGACAATCAATTTTACTACCGTAATGATGGCCTGCAGGCGC AATCTGTTTTGTATGTCAAAGGGTTAGATGGTGTTGAAAAGCCAGTTCTCGATCCAAACAAACTGTCAGCGGATGGTACT GTGGCGCTATCAGGTGTTGCAGTGAGTAATGACGGTAAAATTTTAGCCTATGGTGTGTCAAATTCGGGCTCAGATTGGCA GCAATGGCAGTTTGTTGATATCGCAACCGGTAAGAAACTTGCCGATGAATTGAAATGGATTAAATTTTCTAGCGCAGTGT GGGATAAAGAAAACCAAGGTGTGTTTTATGCTCGCTATGATGCCCCTGCGGGTGGAGATGTCTTAGCCGACGTCAATTTC AATCAAAAAGTGTATTACCATAAATTAGGCACAGATCAGCGCCAAGATTTATTGATTTACGAGCGCCCACAGAATAAAGA TTGGGGCTTTGGCATAGAGGTATCCGAGAAAGGCGAATACTTATTACTGTCGATTTCTCAAGGCACGGATAAGCGTAATC GTTTCTTCTATAAATCCTTATTTGAGCCTAAATCGCAAGTGGTGGAATTAATCCTCAACTTAGAAGCTGAATATGAGTTT CTCGGTAATGATGGTTCAGTGTTTTATTTTAAAACCGACTTAGATGCGCCTAACGGTAAAGTGATTGCGATTGATACCCG CAATAGCGATAAATCCCAATGGCAAACCATTATTCCTGAGTCTACAGATCCGATAAATAACGTCGCCATAATTAATGACC ATTTAGTGGTGAGTTATTTACACGATGTATTAGGTCAATTATCGATTTACAGCATGGGTGGGCAGAAACGCCAAGACGTG GCATTACCTGGTCAAGGCAATGTGGCTGGGCCTTTTGGCAAAGCAAGCAAAGACTATTTCTATTATGTGTTTAATAGTTA TATTCAACCTGAGACCACCTATAAGTTTGACTTTAAAACCGCTGAATCAAGCGTAATTGCCAAACCTAAAGTATCGTTTA ATCCCGATGACTATGTTTCTGAGCAAGTGTTTTATCGCAGCAAAGACGGCACGCGTGTGCCTATGATGCTGTCCTATAAA AAAGGCTTAGTGAAGAACGCTCAAAACCCAACATTACTGTATGCCTATGGTGGCTTTGCCATTTCGATGACACCACGCTT TAGTCCGGCCAACATTGCTTGGTTAGATATGGGCGGTATTTACGCTGTGCCGAGTTTACGTGGCGGCGCTGAATACGGCG AAAGCTGGCATCAAGCGGGAATGTTCGATAAAAAGCAAAATGTGTTTGATGACTATTTTGCCGCCGCTGAATATCTAGTG AATGAGAAATACACTAATAGCACTAAGTTAGGAGCCTATGGCCGCAGTAATGGTGGTCTGTTGATGGGCGCTGCGGTAAC TCAACGCCCTGAACTCTTTGCTGCGGTATTACCTGCTGTGGGCGTTCTGGATATGCTGCGCTTCCATAAGTTCACTATCG GTTGGGCTTGGACGAGTGAATATGGCAGTGCCGATAAAGCAGATCAATTCCCAGCGCTATTGGCTTATTCGCCTTATCAC AATGTGAAAGCGCAAGCTTATCCAGCGACTATGGTGATGACTGCCGATCATGATGATCGCGTCGTGCCGTTACACAGTTT CAAGTTCGCAGCCATGTTGCAGGATAAGCAGCAGGGCACTGAACCTGTGATCATGCGTATCGAGTCCAATGCGGGTCACG GAGCCGGTAAACCAACGGCGATGAAGATTGATGAATTTGCCGATATCTACAGTTTCTTGTGGCAGAGTTTTGGCTTAACA CTGCCACAAACTATCGCAAAATAA
Upstream 100 bases:
>100_bases ATCTTCTTATTAAGTTACGGCATTGCCATGATTTTTTTTGCTTGTATAGTACTTGCTGAAAAGGCCTTAAGCCCGAAACC ACAAGAAGGACGATAACAAG
Downstream 100 bases:
>100_bases CTAACTATGTTAATAAAATGGGGTCATTTGACCCCATTGTCTTTTACAATTGCCCCTATTCATCTGAAACCCGCGCTATT CCTATCTATATCTTCGTCGG
Product: prolyl oligopeptidase
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MALRFRLAKQGLLVATLGMALGACQSGNAPEQNSTEQASANKLVYPVTQKDDLVETIHGVTVADPYRHLEANTPETEAWV KEQQAFGQAYLAKIPNKQAVVDRITELWNYEKVSAPFENGDNQFYYRNDGLQAQSVLYVKGLDGVEKPVLDPNKLSADGT VALSGVAVSNDGKILAYGVSNSGSDWQQWQFVDIATGKKLADELKWIKFSSAVWDKENQGVFYARYDAPAGGDVLADVNF NQKVYYHKLGTDQRQDLLIYERPQNKDWGFGIEVSEKGEYLLLSISQGTDKRNRFFYKSLFEPKSQVVELILNLEAEYEF LGNDGSVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIPESTDPINNVAIINDHLVVSYLHDVLGQLSIYSMGGQKRQDV ALPGQGNVAGPFGKASKDYFYYVFNSYIQPETTYKFDFKTAESSVIAKPKVSFNPDDYVSEQVFYRSKDGTRVPMMLSYK KGLVKNAQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSLRGGAEYGESWHQAGMFDKKQNVFDDYFAAAEYLV NEKYTNSTKLGAYGRSNGGLLMGAAVTQRPELFAAVLPAVGVLDMLRFHKFTIGWAWTSEYGSADKADQFPALLAYSPYH NVKAQAYPATMVMTADHDDRVVPLHSFKFAAMLQDKQQGTEPVIMRIESNAGHGAGKPTAMKIDEFADIYSFLWQSFGLT LPQTIAK
Sequences:
>Translated_727_residues MALRFRLAKQGLLVATLGMALGACQSGNAPEQNSTEQASANKLVYPVTQKDDLVETIHGVTVADPYRHLEANTPETEAWV KEQQAFGQAYLAKIPNKQAVVDRITELWNYEKVSAPFENGDNQFYYRNDGLQAQSVLYVKGLDGVEKPVLDPNKLSADGT VALSGVAVSNDGKILAYGVSNSGSDWQQWQFVDIATGKKLADELKWIKFSSAVWDKENQGVFYARYDAPAGGDVLADVNF NQKVYYHKLGTDQRQDLLIYERPQNKDWGFGIEVSEKGEYLLLSISQGTDKRNRFFYKSLFEPKSQVVELILNLEAEYEF LGNDGSVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIPESTDPINNVAIINDHLVVSYLHDVLGQLSIYSMGGQKRQDV ALPGQGNVAGPFGKASKDYFYYVFNSYIQPETTYKFDFKTAESSVIAKPKVSFNPDDYVSEQVFYRSKDGTRVPMMLSYK KGLVKNAQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSLRGGAEYGESWHQAGMFDKKQNVFDDYFAAAEYLV NEKYTNSTKLGAYGRSNGGLLMGAAVTQRPELFAAVLPAVGVLDMLRFHKFTIGWAWTSEYGSADKADQFPALLAYSPYH NVKAQAYPATMVMTADHDDRVVPLHSFKFAAMLQDKQQGTEPVIMRIESNAGHGAGKPTAMKIDEFADIYSFLWQSFGLT LPQTIAK >Mature_726_residues ALRFRLAKQGLLVATLGMALGACQSGNAPEQNSTEQASANKLVYPVTQKDDLVETIHGVTVADPYRHLEANTPETEAWVK EQQAFGQAYLAKIPNKQAVVDRITELWNYEKVSAPFENGDNQFYYRNDGLQAQSVLYVKGLDGVEKPVLDPNKLSADGTV ALSGVAVSNDGKILAYGVSNSGSDWQQWQFVDIATGKKLADELKWIKFSSAVWDKENQGVFYARYDAPAGGDVLADVNFN QKVYYHKLGTDQRQDLLIYERPQNKDWGFGIEVSEKGEYLLLSISQGTDKRNRFFYKSLFEPKSQVVELILNLEAEYEFL GNDGSVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIPESTDPINNVAIINDHLVVSYLHDVLGQLSIYSMGGQKRQDVA LPGQGNVAGPFGKASKDYFYYVFNSYIQPETTYKFDFKTAESSVIAKPKVSFNPDDYVSEQVFYRSKDGTRVPMMLSYKK GLVKNAQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSLRGGAEYGESWHQAGMFDKKQNVFDDYFAAAEYLVN EKYTNSTKLGAYGRSNGGLLMGAAVTQRPELFAAVLPAVGVLDMLRFHKFTIGWAWTSEYGSADKADQFPALLAYSPYHN VKAQAYPATMVMTADHDDRVVPLHSFKFAAMLQDKQQGTEPVIMRIESNAGHGAGKPTAMKIDEFADIYSFLWQSFGLTL PQTIAK
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1505
COG function: function code E; Serine proteases of the peptidase family S9A
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI41349456, Length=708, Percent_Identity=41.5254237288136, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI108860686, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI284172420, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI284172413, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI70778815, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI284172438, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=7e-19, Organism=Homo sapiens, GI284172431, Length=200, Percent_Identity=29.5, Blast_Score=94, Evalue=7e-19, Organism=Homo sapiens, GI108860692, Length=198, Percent_Identity=29.2929292929293, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1788150, Length=695, Percent_Identity=26.9064748201439, Blast_Score=212, Evalue=7e-56, Organism=Drosophila melanogaster, GI24583414, Length=712, Percent_Identity=42.6966292134831, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI221510989, Length=720, Percent_Identity=39.8611111111111, Blast_Score=508, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 80895; Mature: 80764
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRFRLAKQGLLVATLGMALGACQSGNAPEQNSTEQASANKLVYPVTQKDDLVETIHGV CCEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEECCCCHHHHHHHCCC TVADPYRHLEANTPETEAWVKEQQAFGQAYLAKIPNKQAVVDRITELWNYEKVSAPFENG EEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC DNQFYYRNDGLQAQSVLYVKGLDGVEKPVLDPNKLSADGTVALSGVAVSNDGKILAYGVS CCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECC NSGSDWQQWQFVDIATGKKLADELKWIKFSSAVWDKENQGVFYARYDAPAGGDVLADVNF CCCCCCCEEEEEEECCCHHHHHHHHHEEECHHHCCCCCCCEEEEEECCCCCCCEEEECCC NQKVYYHKLGTDQRQDLLIYERPQNKDWGFGIEVSEKGEYLLLSISQGTDKRNRFFYKSL CCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH FEPKSQVVELILNLEAEYEFLGNDGSVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIPE CCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHEECCC STDPINNVAIINDHLVVSYLHDVLGQLSIYSMGGQKRQDVALPGQGNVAGPFGKASKDYF CCCCCCCEEEEECHHHHHHHHHHHHCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEE YYVFNSYIQPETTYKFDFKTAESSVIAKPKVSFNPDDYVSEQVFYRSKDGTRVPMMLSYK EEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHCCHHEEECCCCCCCCEEEECH KGLVKNAQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSLRGGAEYGESWHQAG HHHHCCCCCCEEEEEECCEEEEECCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHCC MFDKKQNVFDDYFAAAEYLVNEKYTNSTKLGAYGRSNGGLLMGAAVTQRPELFAAVLPAV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHH GVLDMLRFHKFTIGWAWTSEYGSADKADQFPALLAYSPYHNVKAQAYPATMVMTADHDDR HHHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEECCEEEEEEECCCCC VVPLHSFKFAAMLQDKQQGTEPVIMRIESNAGHGAGKPTAMKIDEFADIYSFLWQSFGLT EEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC LPQTIAK CHHHHCC >Mature Secondary Structure ALRFRLAKQGLLVATLGMALGACQSGNAPEQNSTEQASANKLVYPVTQKDDLVETIHGV CEEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEECCCCHHHHHHHCCC TVADPYRHLEANTPETEAWVKEQQAFGQAYLAKIPNKQAVVDRITELWNYEKVSAPFENG EEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC DNQFYYRNDGLQAQSVLYVKGLDGVEKPVLDPNKLSADGTVALSGVAVSNDGKILAYGVS CCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECC NSGSDWQQWQFVDIATGKKLADELKWIKFSSAVWDKENQGVFYARYDAPAGGDVLADVNF CCCCCCCEEEEEEECCCHHHHHHHHHEEECHHHCCCCCCCEEEEEECCCCCCCEEEECCC NQKVYYHKLGTDQRQDLLIYERPQNKDWGFGIEVSEKGEYLLLSISQGTDKRNRFFYKSL CCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHH FEPKSQVVELILNLEAEYEFLGNDGSVFYFKTDLDAPNGKVIAIDTRNSDKSQWQTIIPE CCCHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHEECCC STDPINNVAIINDHLVVSYLHDVLGQLSIYSMGGQKRQDVALPGQGNVAGPFGKASKDYF CCCCCCCEEEEECHHHHHHHHHHHHCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEE YYVFNSYIQPETTYKFDFKTAESSVIAKPKVSFNPDDYVSEQVFYRSKDGTRVPMMLSYK EEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHCCHHEEECCCCCCCCEEEECH KGLVKNAQNPTLLYAYGGFAISMTPRFSPANIAWLDMGGIYAVPSLRGGAEYGESWHQAG HHHHCCCCCCEEEEEECCEEEEECCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHCC MFDKKQNVFDDYFAAAEYLVNEKYTNSTKLGAYGRSNGGLLMGAAVTQRPELFAAVLPAV CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHH GVLDMLRFHKFTIGWAWTSEYGSADKADQFPALLAYSPYHNVKAQAYPATMVMTADHDDR HHHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEECCEEEEEEECCCCC VVPLHSFKFAAMLQDKQQGTEPVIMRIESNAGHGAGKPTAMKIDEFADIYSFLWQSFGLT EEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC LPQTIAK CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]