| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173901
Identifier: 126173901
GI number: 126173901
Start: 1948737
End: 1949714
Strand: Direct
Name: 126173901
Synonym: Sbal_1669
Alternate gene names: NA
Gene position: 1948737-1949714 (Clockwise)
Preceding gene: 126173900
Following gene: 126173906
Centisome position: 38.01
GC content: 45.91
Gene sequence:
>978_bases TTGAGCCATTTTTTCAGTCGGTTGCCATTATGTTTGTCGTTAACTTGCTTAGTATTTCTGAGCATAATTCCTGCCGTTTT CGCCAATAGTGCATCCCCCGCCAATACGTTTACACCTGCGACACTTACATCTGCATCTCAAGCGAATGATGCTGGCTTGC CTGTCGATCCTGTTTCTATCAGTCATGTGCCTAGCAGTAATGCCAATGGCAGCAATCCGATAGAGTCGAGCAGTAATCCC AATTCTGTTTATGCCTTTGGCAGTTATCTCGGCACTGGTGTGTATCGCGCCGCTAACCAAAATGCGACCGTGGTCAGTAT TCCGTTAAGTTTTGATTTAAAGAAAGATAGCGGAAGCCAGACTTGGTTACGTTTACCTATCTCCTTTGGCTTTTTTGACT ATTTAGCCAAAGATATCACTGAAGGCGAGTTACCGTCGTCGATAGGCACTATGACCATTACCCCAGGTTTTGAGCATCAC TGGCAGGCGAGCGAAAACACTCGAATGGAAGGGTATTTAGATATCGGTTTTGGTACTAACTTCGATAAAAACGATAACGT TGCCATTATCGCCTCTGGGATCAGTAGCTTGTATGATTTTACCCTAGCAGGGCAAGATGCGGTGTGGGTGTCGAGATTAC GTTTCGCTGGGTACAGTGAGCACTATGGTAAGTTTGCCGATCAATTTGCGGTGTTACAAACTGGCGTTGATTTAGGATTA GCACCGCGCTGGCAATGGTGGGATCTGCAGGTGCAACCAAGGATCTTTGCTGTGGGTTATTGGTATTTCAATGAGCTCAG ATTTATCAGCGAGATAGAGCAAGATACCATAGTTTCAGGCAGTTATGAGGCTGGTTTTTCCCTCGCGTTTTCTAAGCCCC TTGGGGGCGAATTGCTGGGTGTTGATCGTATTGGATTCAGCTATCGCCGTGGTGATGGATTGAACATTTGGCGTTTGATG TTCAGCTTTCCCATCTAA
Upstream 100 bases:
>100_bases ACACATGATGTCTGAATATCATTTTATGGATGAAAATAAGTAGCTTTGTATTTATGATGGGTCGACCGATTGAGTCAGAA ATGAGTAAGGTTTAAGTCAA
Downstream 100 bases:
>100_bases GTAGGGTCAACTAGACGGCTTGAATATATAAACCGCTCGAACATGTCGATGTTGTGAACATGGGTTAACTTAGCACAGTA TTATCACCGCTTAATTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSHFFSRLPLCLSLTCLVFLSIIPAVFANSASPANTFTPATLTSASQANDAGLPVDPVSISHVPSSNANGSNPIESSSNP NSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHH WQASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLM FSFPI
Sequences:
>Translated_325_residues MSHFFSRLPLCLSLTCLVFLSIIPAVFANSASPANTFTPATLTSASQANDAGLPVDPVSISHVPSSNANGSNPIESSSNP NSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHH WQASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLM FSFPI >Mature_324_residues SHFFSRLPLCLSLTCLVFLSIIPAVFANSASPANTFTPATLTSASQANDAGLPVDPVSISHVPSSNANGSNPIESSSNPN SVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQTWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHW QASENTRMEGYLDIGFGTNFDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGLA PRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLGVDRIGFSYRRGDGLNIWRLMF SFPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35669; Mature: 35538
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFFSRLPLCLSLTCLVFLSIIPAVFANSASPANTFTPATLTSASQANDAGLPVDPVSI CCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE SHVPSSNANGSNPIESSSNPNSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQ ECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCCC TWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHWQASENTRMEGYLDIGFGTN EEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC FDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL CCCCCCEEEEECCHHHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLG CCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCCCCEEE VDRIGFSYRRGDGLNIWRLMFSFPI EECCCCEEECCCCCCEEHEEECCCC >Mature Secondary Structure SHFFSRLPLCLSLTCLVFLSIIPAVFANSASPANTFTPATLTSASQANDAGLPVDPVSI CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE SHVPSSNANGSNPIESSSNPNSVYAFGSYLGTGVYRAANQNATVVSIPLSFDLKKDSGSQ ECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHEEECCCCCEEEEEEEEEEECCCCCCC TWLRLPISFGFFDYLAKDITEGELPSSIGTMTITPGFEHHWQASENTRMEGYLDIGFGTN EEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCC FDKNDNVAIIASGISSLYDFTLAGQDAVWVSRLRFAGYSEHYGKFADQFAVLQTGVDLGL CCCCCCEEEEECCHHHHHHEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC APRWQWWDLQVQPRIFAVGYWYFNELRFISEIEQDTIVSGSYEAGFSLAFSKPLGGELLG CCCCEEEEEEECCEEEEEEEHHHHHHHHHHHHCHHHEECCCCCCCEEEEECCCCCCCEEE VDRIGFSYRRGDGLNIWRLMFSFPI EECCCCEEECCCCCCEEHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA