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The map label for this gene is 126173877

Identifier: 126173877

GI number: 126173877

Start: 1923392

End: 1924639

Strand: Direct

Name: 126173877

Synonym: Sbal_1645

Alternate gene names: NA

Gene position: 1923392-1924639 (Clockwise)

Preceding gene: 126173876

Following gene: 126173879

Centisome position: 37.51

GC content: 40.46

Gene sequence:

>1248_bases
ATGCGTAATGTTAATAAAATCGCAGCTCTATTATTGCTTTCTGTTTGTGGCGGTTCATTAACACTTTCTTCTGCGGTAGC
GGAAGAAAAGTGTCCTATCGACAAACGTCAATCTAAAGCGGTAGGCGAAGGCGCAGCGAAGAAGGTTCAAAAGTCGTTCG
AAGCTTATACTAATGGCCAGATAGATGAAGCCATTGCTATTTTGCTCGAAGCAAATGCTAAGAACGATTTCGATAAAGCC
TATGTTGCACGTATGTTGGGTAACTTTTATGCCGAAAAAGGCAAAATGGATACCGCGATCAAGTACCTAAAACAAGCTGT
TGAAGCTGATATTTTAGGTGGCACAGATCATGCTGCAACTATGCGTCTTTATGCGGATTTGCTGTTACAAGAGAAGAAGT
TTAAGGAGGCGATTCCTTACTACTACAAGTGGATGGAATTCACTTGTAAATCTGATTCTCAAATATACCGTCGTATTGGT
ATTGCGCATTCAGAGCTAAAACAGTGGGATAAAGTCATTGAAGTGGCCGATAAAGGTCTTTCATTAGCTGAAGCTCCTGA
TAAAGGTCTGTATCAGATGAAACTGACAGCTTACTTCAACCAGAAGAAGTATAAGAAAGCTGTTGGCGTGTTAGAAGTCA
TGGTGCCATTATTCCCAGAAGATGGCAGACTGTGGGTTCAATTAGCGCAGTTTTATTTGATGGTTGAAGACTATGACAAG
TCTCTTGCTACTTACGATTTAGCTTATAGAAATGGTTTCTTAGATAGCGCGGGTAACATTACCCGTTTAGCACAGTTGAT
GGCACAGAAAGGTGCTCCATATCAAGCTGCTAAAGTGTATCAGAAACACATGAAATCAGGCTTGATTGCTGAGGATGCTA
AGTCCTTAGAGATTTTGGCTGGTTTCTATCAAAATGCTAAAGAGTTTAAGCAAGCAGCTGATTATTATGGTAAAGCTGCC
GCTATAAGCAAGGATGGTAAGACTTACCTGAAACAAGGTCGCTTACTAAACTTGGATGAACAATACACTGCTGCGATCCC
TGTGCTTGAAAAAGCCATATCCATGGGCATTGATCATCCTGGCGAAGCAAACTTCGAATTAGCTTTGGCTCATTTAAGTT
TGAAACAGTACAAGTCAGCTTATAACCGTGCAGTATTAGCTGCTAATGATAAGAAGACTGAGAAGAGTGCAAATAGCTAT
ATCTCTTATATCAAAGAGAAAGCACGTATGCATAACATCACACTGTAA

Upstream 100 bases:

>100_bases
AGTGGAAGTACAAGCCAAAGATTGTTGACGGCAAGCCACTGAAACAAACTGGTCAGACAGTGCAGCTTGACTTTACCTTA
GATAAGGGAGGCAAATAACG

Downstream 100 bases:

>100_bases
TCGCTTGGCAGTTTAGCGTTTGAATTTGAAAGCCCCGAAAGGGGCTTTTTCTTTGCTACTAATTACAACACAAGCTTACT
GTAAGCGGATTAAGGCTTGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Domain Protein Component Of nB System; Tetratricopeptide Domain Protein; PAS/PAC Sensor Protein; TPR Repeat Protein; Tetratricopeptide Region; Short Chain Dehydrogenase

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRNVNKIAALLLLSVCGGSLTLSSAVAEEKCPIDKRQSKAVGEGAAKKVQKSFEAYTNGQIDEAIAILLEANAKNDFDKA
YVARMLGNFYAEKGKMDTAIKYLKQAVEADILGGTDHAATMRLYADLLLQEKKFKEAIPYYYKWMEFTCKSDSQIYRRIG
IAHSELKQWDKVIEVADKGLSLAEAPDKGLYQMKLTAYFNQKKYKKAVGVLEVMVPLFPEDGRLWVQLAQFYLMVEDYDK
SLATYDLAYRNGFLDSAGNITRLAQLMAQKGAPYQAAKVYQKHMKSGLIAEDAKSLEILAGFYQNAKEFKQAADYYGKAA
AISKDGKTYLKQGRLLNLDEQYTAAIPVLEKAISMGIDHPGEANFELALAHLSLKQYKSAYNRAVLAANDKKTEKSANSY
ISYIKEKARMHNITL

Sequences:

>Translated_415_residues
MRNVNKIAALLLLSVCGGSLTLSSAVAEEKCPIDKRQSKAVGEGAAKKVQKSFEAYTNGQIDEAIAILLEANAKNDFDKA
YVARMLGNFYAEKGKMDTAIKYLKQAVEADILGGTDHAATMRLYADLLLQEKKFKEAIPYYYKWMEFTCKSDSQIYRRIG
IAHSELKQWDKVIEVADKGLSLAEAPDKGLYQMKLTAYFNQKKYKKAVGVLEVMVPLFPEDGRLWVQLAQFYLMVEDYDK
SLATYDLAYRNGFLDSAGNITRLAQLMAQKGAPYQAAKVYQKHMKSGLIAEDAKSLEILAGFYQNAKEFKQAADYYGKAA
AISKDGKTYLKQGRLLNLDEQYTAAIPVLEKAISMGIDHPGEANFELALAHLSLKQYKSAYNRAVLAANDKKTEKSANSY
ISYIKEKARMHNITL
>Mature_415_residues
MRNVNKIAALLLLSVCGGSLTLSSAVAEEKCPIDKRQSKAVGEGAAKKVQKSFEAYTNGQIDEAIAILLEANAKNDFDKA
YVARMLGNFYAEKGKMDTAIKYLKQAVEADILGGTDHAATMRLYADLLLQEKKFKEAIPYYYKWMEFTCKSDSQIYRRIG
IAHSELKQWDKVIEVADKGLSLAEAPDKGLYQMKLTAYFNQKKYKKAVGVLEVMVPLFPEDGRLWVQLAQFYLMVEDYDK
SLATYDLAYRNGFLDSAGNITRLAQLMAQKGAPYQAAKVYQKHMKSGLIAEDAKSLEILAGFYQNAKEFKQAADYYGKAA
AISKDGKTYLKQGRLLNLDEQYTAAIPVLEKAISMGIDHPGEANFELALAHLSLKQYKSAYNRAVLAANDKKTEKSANSY
ISYIKEKARMHNITL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46411; Mature: 46411

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNVNKIAALLLLSVCGGSLTLSSAVAEEKCPIDKRQSKAVGEGAAKKVQKSFEAYTNGQ
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IDEAIAILLEANAKNDFDKAYVARMLGNFYAEKGKMDTAIKYLKQAVEADILGGTDHAAT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
MRLYADLLLQEKKFKEAIPYYYKWMEFTCKSDSQIYRRIGIAHSELKQWDKVIEVADKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
SLAEAPDKGLYQMKLTAYFNQKKYKKAVGVLEVMVPLFPEDGRLWVQLAQFYLMVEDYDK
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLATYDLAYRNGFLDSAGNITRLAQLMAQKGAPYQAAKVYQKHMKSGLIAEDAKSLEILA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
GFYQNAKEFKQAADYYGKAAAISKDGKTYLKQGRLLNLDEQYTAAIPVLEKAISMGIDHP
HHHHHHHHHHHHHHHHCCHHEECCCCHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCC
GEANFELALAHLSLKQYKSAYNRAVLAANDKKTEKSANSYISYIKEKARMHNITL
CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA