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The map label for this gene is tonB [H]

Identifier: 126173876

GI number: 126173876

Start: 1922769

End: 1923389

Strand: Direct

Name: tonB [H]

Synonym: Sbal_1644

Alternate gene names: 126173876

Gene position: 1922769-1923389 (Clockwise)

Preceding gene: 126173875

Following gene: 126173877

Centisome position: 37.5

GC content: 46.7

Gene sequence:

>621_bases
ATGCTAAGAGCACTAGTATCGATCATTATTGGTGCTGCTGTGACTTTTGCTCTGTTCTCTTTTATGGCGTTCTTGGTCGG
TGGCGGCGCACAGCGCGGCGAAACATCGGCCGAGACCCCTGTAATTGAAATCACTATGGATAGACAGGATTCAAAAGCAC
AGAATAAGCCAAGGGTAGTGCCTAAGCCACCACCACCACCAGAGCAACCACAGAAGCCTGATACAACGCCACCTGATTCA
TCAAGTAATATTGATACATCAATGTCGTTCAATATGGGCGGTGTAGAAGCTGGCGGTGCAAGTACTGGTTTCAAATTAGG
CAATATGATGACTCGCGATGGTGACGCAACGCCTATCGTTCGTATCGAACCTCAGTATCCAATTGCTGCGGCTCGTGATG
GGAAAGAAGGTTGGGTACAACTTCGTTTCACCATCAATGAACTCGGTGGTATCGATGACGTTGAAGTTATTCAAGCAGAG
CCAAAGCGTTTATTTGATAAAGAAGCGATTCGCGCACTGAAGAAGTGGAAGTACAAGCCAAAGATTGTTGACGGCAAGCC
ACTGAAACAAACTGGTCAGACAGTGCAGCTTGACTTTACCTTAGATAAGGGAGGCAAATAA

Upstream 100 bases:

>100_bases
GCAGACAAAGACGCAATGCACGGCTTAGTTGTGAAAGTTCTAGACCAAGTGAAAGCAGCTGGTATAGATAAAATTTCGGT
ATCTGCGGGGAACGATTAAT

Downstream 100 bases:

>100_bases
CGATGCGTAATGTTAATAAAATCGCAGCTCTATTATTGCTTTCTGTTTGTGGCGGTTCATTAACACTTTCTTCTGCGGTA
GCGGAAGAAAAGTGTCCTAT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLRALVSIIIGAAVTFALFSFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTSMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQTGQTVQLDFTLDKGGK

Sequences:

>Translated_206_residues
MLRALVSIIIGAAVTFALFSFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTSMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQTGQTVQLDFTLDKGGK
>Mature_206_residues
MLRALVSIIIGAAVTFALFSFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVVPKPPPPPEQPQKPDTTPPDS
SSNIDTSMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIVRIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAE
PKRLFDKEAIRALKKWKYKPKIVDGKPLKQTGQTVQLDFTLDKGGK

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 22327; Mature: 22327

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALVSIIIGAAVTFALFSFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPPPPEQPQKPDTTPPDSSSNIDTSMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAEPKRLFDKEAIRALKKWKYKP
EECCCCCEEECCCCCCCEEEEEEEEHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
KIVDGKPLKQTGQTVQLDFTLDKGGK
CCCCCCCCHHCCCEEEEEEEECCCCC
>Mature Secondary Structure
MLRALVSIIIGAAVTFALFSFMAFLVGGGAQRGETSAETPVIEITMDRQDSKAQNKPRVV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PKPPPPPEQPQKPDTTPPDSSSNIDTSMSFNMGGVEAGGASTGFKLGNMMTRDGDATPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCEEECCCCCCCEE
RIEPQYPIAAARDGKEGWVQLRFTINELGGIDDVEVIQAEPKRLFDKEAIRALKKWKYKP
EECCCCCEEECCCCCCCEEEEEEEEHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
KIVDGKPLKQTGQTVQLDFTLDKGGK
CCCCCCCCHHCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704984; 10984043 [H]