| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173872
Identifier: 126173872
GI number: 126173872
Start: 1919685
End: 1920467
Strand: Direct
Name: 126173872
Synonym: Sbal_1640
Alternate gene names: NA
Gene position: 1919685-1920467 (Clockwise)
Preceding gene: 126173869
Following gene: 126173873
Centisome position: 37.44
GC content: 41.76
Gene sequence:
>783_bases ATGTCCAAGGTAAGCAATAGAACAAAAATCGCTACTGCACTTGTTGGCGTGCTGGCATTAGCGAGCAGCAACTTCGTTGT TGCAGATCCTCTTACCGACGTGCAGAAAGCGGATAGTATGATCCATGCTGATGCTGCTGCGTCGCAAAAGAACGTTGATA AGTATTTCGATCAAGCACAAGACATGCTTTTTGAGTATGGTTCTGTCGCAGATGAGCGCGAATCACTGAAATCATATAAC GATTATGTTGCCAGCTTAGTCGCTGATCAACAAAAGACAATGGACTCAGTGCAAGGCGACATCAATGGTGTTGATAAACT TCGCCAAGGCGTAGTGCCATTAATGTTTAAAATGGTTGAGTCATTAGAACAGTTTGTTCAATTAGATTTACCTTTCAACT CTGAAGTACGTACTAATCGTGTTAATGAGCTGAAAAACCTTCTTAATACTGCTGAAGTTACCTTAGCCGAAAAGTACCGT TTAATTCTTGATGCTTATAGCATCGAGCGTGAATATGGTAGTGCGGTTGCAGTTAACCAAGGTAAGTTAAACCTAGATGG TAAAGAAGTGTTGGTTGACTTCTTTAACTTAGGTCGTGTTGCTCTTTATGCACAGAGTTTAGATCAAAAGACTGGCTGGA TGTACAACCCAGAATCTAAGGGTTGGGATAAGTTAGATGACAGCTATTTGCGTGAACTGACTAAAGGTATCCGCATTGCC CGTAAACAAGGTGCTCTAGATCTATTTGCGTTACCAATTCCTGCTGCGGAGACTGCACAATAA
Upstream 100 bases:
>100_bases AAGACGAACTTACAGTAATTTTTTCGGCGAGCATTAATTGCTTCTCGTTTTGTTGCTGGTAAGTTAAACCTTTTTATTCA CTTCAAATTGGTTGGGAACT
Downstream 100 bases:
>100_bases TGAAGAAGTTAATTACTACAGCTGTGTTGGCTGCAAGTTTCTCTTTAACTGCTGGTATGGCTAGCGCTGCAGATGCGCCT AAGTCGATTGACCAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Chromosome Segregation ATPase; MotA/lQ/ExbB Proton Channel
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYN DYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYR LILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA RKQGALDLFALPIPAAETAQ
Sequences:
>Translated_260_residues MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYN DYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYR LILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA RKQGALDLFALPIPAAETAQ >Mature_259_residues SKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQDMLFEYGSVADERESLKSYND YVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVESLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRL ILDAYSIEREYGSAVAVNQGKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIAR KQGALDLFALPIPAAETAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28917; Mature: 28786
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQ CCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRLILDAYSIEREYGSAVAVNQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH RKQGALDLFALPIPAAETAQ HHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SKVSNRTKIATALVGVLALASSNFVVADPLTDVQKADSMIHADAAASQKNVDKYFDQAQ CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLFEYGSVADERESLKSYNDYVASLVADQQKTMDSVQGDINGVDKLRQGVVPLMFKMVE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SLEQFVQLDLPFNSEVRTNRVNELKNLLNTAEVTLAEKYRLILDAYSIEREYGSAVAVNQ HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC GKLNLDGKEVLVDFFNLGRVALYAQSLDQKTGWMYNPESKGWDKLDDSYLRELTKGIRIA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH RKQGALDLFALPIPAAETAQ HHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA