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The map label for this gene is 126173797

Identifier: 126173797

GI number: 126173797

Start: 1821407

End: 1821871

Strand: Direct

Name: 126173797

Synonym: Sbal_1563

Alternate gene names: NA

Gene position: 1821407-1821871 (Clockwise)

Preceding gene: 126173796

Following gene: 126173798

Centisome position: 35.52

GC content: 46.67

Gene sequence:

>465_bases
ATGGAAGAAACAAAGATGGACGTGGTTTATATTGATGCTCGACCGCTACTTGGATTGAGCACCCGCACGAACAATCGGGC
CGAAATGTCCGCCGATAGCGCTAAAATTGGCAGTTTATGGCAAGCTTTTTTTGAATCATCACAGCTCACCGCCATGCTCA
ATTCGCCCATGTATGGCGTGTATTATGACTATGAGTCAGACATGAATGGCGAGTTTGCTGTGCTGGTGGGCAAGGCAATT
GATGCCCCTGTTGAGGCAAACCACTTCACATCGCTTGAGCTTGAAGCCGGTAAATACCTTAAATTCACCGGTCAAGGTGA
CATGCCCCAGTGTGTTATCGATCTTTGGGGACAAGTGTGGGGCTATTTTAGTGCTAACGATTGTCCGCATCAGCGACGTT
ATCAAACTGATTTTGAAGTCTATCTCAGCGCCACTGAGGTTGAGATTTATATCGGGATTTTATGA

Upstream 100 bases:

>100_bases
CTAAGGATAAGTAGTCTCGAGTAATTAATGTATTAGCGTCGTGGCCTTAAGGCACGACGCTAAAATCACGCAATTAACTA
AAGTATGGGTTTAGATTTCT

Downstream 100 bases:

>100_bases
TTTAAATCGTAAACTATCACTCAAGTGAGTATCAGGATATGTCAGTGATTTATGTAAACTCACAATACTTAATCAACTGA
TAGGCAACTAAAGGATTGAA

Product: transcription activator effector binding

Products: NA

Alternate protein names: Transcription Activator; Transcriptional Regulator AraC Family; Orphan Protein; CTA2 Subfamily 1 Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MEETKMDVVYIDARPLLGLSTRTNNRAEMSADSAKIGSLWQAFFESSQLTAMLNSPMYGVYYDYESDMNGEFAVLVGKAI
DAPVEANHFTSLELEAGKYLKFTGQGDMPQCVIDLWGQVWGYFSANDCPHQRRYQTDFEVYLSATEVEIYIGIL

Sequences:

>Translated_154_residues
MEETKMDVVYIDARPLLGLSTRTNNRAEMSADSAKIGSLWQAFFESSQLTAMLNSPMYGVYYDYESDMNGEFAVLVGKAI
DAPVEANHFTSLELEAGKYLKFTGQGDMPQCVIDLWGQVWGYFSANDCPHQRRYQTDFEVYLSATEVEIYIGIL
>Mature_154_residues
MEETKMDVVYIDARPLLGLSTRTNNRAEMSADSAKIGSLWQAFFESSQLTAMLNSPMYGVYYDYESDMNGEFAVLVGKAI
DAPVEANHFTSLELEAGKYLKFTGQGDMPQCVIDLWGQVWGYFSANDCPHQRRYQTDFEVYLSATEVEIYIGIL

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17400; Mature: 17400

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETKMDVVYIDARPLLGLSTRTNNRAEMSADSAKIGSLWQAFFESSQLTAMLNSPMYGV
CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEE
YYDYESDMNGEFAVLVGKAIDAPVEANHFTSLELEAGKYLKFTGQGDMPQCVIDLWGQVW
EEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH
GYFSANDCPHQRRYQTDFEVYLSATEVEIYIGIL
CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEC
>Mature Secondary Structure
MEETKMDVVYIDARPLLGLSTRTNNRAEMSADSAKIGSLWQAFFESSQLTAMLNSPMYGV
CCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEE
YYDYESDMNGEFAVLVGKAIDAPVEANHFTSLELEAGKYLKFTGQGDMPQCVIDLWGQVW
EEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH
GYFSANDCPHQRRYQTDFEVYLSATEVEIYIGIL
CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA