| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173790
Identifier: 126173790
GI number: 126173790
Start: 1810490
End: 1811074
Strand: Direct
Name: 126173790
Synonym: Sbal_1556
Alternate gene names: NA
Gene position: 1810490-1811074 (Clockwise)
Preceding gene: 126173788
Following gene: 126173791
Centisome position: 35.31
GC content: 47.86
Gene sequence:
>585_bases ATGGGATTTTCTATTAGTGCCATTAGTGCTGTTAGTGTAATGAGTGCGGTTCGCCAGAATGTGAAGGCTTTTACCTTGTT AGCCGTGCTCACCAGTGCGAGTGGCTTTTTTTGGACACAAGGCGCCTATGCTGATACTGCTAGTTCAGTAGTGATGAGTG CTGAAACAGCGAGCGCTGAAGCGAGTGTCGATACGGCCACTGGATTAGCAGCGCAAGTCTCCGCGCAAGCTCTTGCGTTA GTGGGAAGTTGGCAACTAGTCTCAGGTCGTTATTTGAATGAAAAGCACGAATGGGTGGATTATCAGATCCTCAATTTGAG TGCAATTAAAGTGATATCAGCGCGGCACTTTAGTTTTACCACCATGAAGAATGTGGACGGTGTCAGCCAGTTCTGGGCGG CGGGCTCTGGGACTTATCAGGCAACGGCGACTGAGTATACAGAGCGGCCAGAGCTGAACTCTTTTGGTGCAGCTAAAGGT GCGGAGTTTGTGTTTAGTTATGCCATTAAGGGCCAAGAGTTACATACTCAAAGAGTTGAAAATGGTGATTTAAAAGAAGT CGAAGTTTGGCAGCGACTCGACTAG
Upstream 100 bases:
>100_bases TTAATCGCGTGCTTGATCTCGATTCTGTGCAGTTGAAGATACCTCCACAACATGAGAACTTAGCGCCAGCGGCTTTGTAC TTTTATAAAGGGATATTTTC
Downstream 100 bases:
>100_bases AAATAGTAAAACAACCGTTAGTTAGCGTTAGGACGTTATTACGCCCGAAAGCAAGGTAACGAGTCGACTTAGCTCTGCGT CGGAGACTTGCGTATCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MGFSISAISAVSVMSAVRQNVKAFTLLAVLTSASGFFWTQGAYADTASSVVMSAETASAEASVDTATGLAAQVSAQALAL VGSWQLVSGRYLNEKHEWVDYQILNLSAIKVISARHFSFTTMKNVDGVSQFWAAGSGTYQATATEYTERPELNSFGAAKG AEFVFSYAIKGQELHTQRVENGDLKEVEVWQRLD
Sequences:
>Translated_194_residues MGFSISAISAVSVMSAVRQNVKAFTLLAVLTSASGFFWTQGAYADTASSVVMSAETASAEASVDTATGLAAQVSAQALAL VGSWQLVSGRYLNEKHEWVDYQILNLSAIKVISARHFSFTTMKNVDGVSQFWAAGSGTYQATATEYTERPELNSFGAAKG AEFVFSYAIKGQELHTQRVENGDLKEVEVWQRLD >Mature_193_residues GFSISAISAVSVMSAVRQNVKAFTLLAVLTSASGFFWTQGAYADTASSVVMSAETASAEASVDTATGLAAQVSAQALALV GSWQLVSGRYLNEKHEWVDYQILNLSAIKVISARHFSFTTMKNVDGVSQFWAAGSGTYQATATEYTERPELNSFGAAKGA EFVFSYAIKGQELHTQRVENGDLKEVEVWQRLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20882; Mature: 20751
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSISAISAVSVMSAVRQNVKAFTLLAVLTSASGFFWTQGAYADTASSVVMSAETASAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHEEECCCCCCC ASVDTATGLAAQVSAQALALVGSWQLVSGRYLNEKHEWVDYQILNLSAIKVISARHFSFT CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECHHHEEEEHHCCCEEE TMKNVDGVSQFWAAGSGTYQATATEYTERPELNSFGAAKGAEFVFSYAIKGQELHTQRVE ECCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHCC NGDLKEVEVWQRLD CCCCHHHHHHHCCC >Mature Secondary Structure GFSISAISAVSVMSAVRQNVKAFTLLAVLTSASGFFWTQGAYADTASSVVMSAETASAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHEEECCCCCCC ASVDTATGLAAQVSAQALALVGSWQLVSGRYLNEKHEWVDYQILNLSAIKVISARHFSFT CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECHHHEEEEHHCCCEEE TMKNVDGVSQFWAAGSGTYQATATEYTERPELNSFGAAKGAEFVFSYAIKGQELHTQRVE ECCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHEEEECCCCHHHHHHCC NGDLKEVEVWQRLD CCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA