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The map label for this gene is ybiT [H]

Identifier: 126173744

GI number: 126173744

Start: 1751984

End: 1753552

Strand: Direct

Name: ybiT [H]

Synonym: Sbal_1506

Alternate gene names: 126173744

Gene position: 1751984-1753552 (Clockwise)

Preceding gene: 126173743

Following gene: 126173749

Centisome position: 34.17

GC content: 46.46

Gene sequence:

>1569_bases
ATGCAGTTCGGCGCTAAGCCACTGTTTGAAAACATCTCAGTTAAATTTGGCGGTGGTAACCGTTACGGTCTTATCGGCGC
AAATGGCTGTGGTAAATCGACCTTCATGAAGATCCTGTGTGGTGATCTAGATCCTAGCGGCGGTAACGTCTCGTTAGATG
TGAATGAGCGTCTGGGTAAACTAAGCCAGAACCAGTTCGGTTATGAAGAATTCAACCTGATCGACACAGTGATCATGGGC
CACCGCGAACTGTGGAAGGTAAAGCAAGAACGTGACCGTATTTATTCTTTACCTGAAATGAGTGAAGAAGACGGCATTAC
CGTTGCCAACCTAGAGATGGATTTTGCTGAGATGGACGGTTATACCGCCGAATCTCGCGCTGGTGAATTGCTGTTAGGTG
TAGGTATCGGTATCGACAGCCATTTTGGTTTGATGTCTGAAATCGCACCGGGTTTAAAACTGCGTGTACTGTTAGCGCAA
GCCCTGTTCTCTGATCCTGACGTGCTGCTGCTCGACGAACCTACCAACAACTTGGACATCGACACAATCCGTTGGTTACA
AGACATGTTGAACCAACGTAGTAGTACTATGGTTATCATTTCGCACGATAGATATTTCTTAAACTCAGTCTGTACTCACA
TGGCTGACTTAGACTACGGCGAACTGCGCGTTTACCCAGGTAACTACGACGAATACATGCAAGCAGCGACTCAAGCTCGC
GAGCGTTTATTGTCTGATAATGCGAAGAAAAAAGCCCAGATCTCTGAACTGCAAACCTTCGTAGCACGCTTCTCGGCTAA
CGCTTCTAAGGCGAAACAAGCCACATCACGTGCCCGTCAAATCGACAAGATTAAGTTAGATGAAGTAAAAGCCTCTAGCC
GTGTGAACCCCTTCATTCGTTTCGAGCAAGAGAAGAAATTGTTCCGTAATGCCTTAGTGATTGAAAACCTAACTAAAGGC
TACGACACTCCGTTATTCAAAGACTTAAACTTAATTGTTGAAGTGGGCGAGCGCATTGCGGTACTGGGTGAAAACGGCGT
CGGTAAAACAACCCTGTTACGTACCCTAATCCATGATATCCCGCAGGATGCAGGTACTATCCAATGGTCTGAAAACGCTA
ACATTGGTTACTATGCACAGGACCATGAGTCTGATTTCGCTAACGAAATGACGCTGTTCGAGTGGATGAGCCAATGGCGC
AAACCAGAAGATGACGACCAATCGGTACGCGGCATCTTAGGCCGTATGTTGTTTGGTTCTGACGACATTAAAAAGTCAGT
CAAAGTGCTGTCTGGTGGTGAGAAAGGTCGTATGTTATTCGGCAAGCTCATCATGCAAAAAGCCAACATTTTAGTGCTCG
ACGAACCGACCAACCACATGGATATGGAATCGATCGAATCATTAAACAACGCACTGGAAATGTACGAAGGCACCTTGATT
TTCGTGAGTCATGACCGTGCATTCGTATCGTCGCTAGCTAACCGTATCCTCGAAGTGACTCACACAGGTGTGAATGACTT
CAGAGGCACTTACGATGAGTTCCTTGCCAGCAAAGGCATCGAAGTCTAA

Upstream 100 bases:

>100_bases
TAGCGTTATTTGGTTTATGCTTATTTAAAGCGGCGCCAGCTGGCTCGGCCAACATTACTCGATTTGGAAGTTCATTTTGA
TCACAACAGCAAATATCACC

Downstream 100 bases:

>100_bases
GGTTACTCGCTATTTAGCTGCATGTGTAAATGTATGCATCTAAATTCAGCATCAATAAAAACGCCGCAATACATTGCGGC
GTTTTTGTATCTGTTTTCTG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSGGNVSLDVNERLGKLSQNQFGYEEFNLIDTVIMG
HRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDGYTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIRFEQEKKLFRNALVIENLTKG
YDTPLFKDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDIPQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWR
KPEDDDQSVRGILGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV

Sequences:

>Translated_522_residues
MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSGGNVSLDVNERLGKLSQNQFGYEEFNLIDTVIMG
HRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDGYTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIRFEQEKKLFRNALVIENLTKG
YDTPLFKDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDIPQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWR
KPEDDDQSVRGILGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV
>Mature_522_residues
MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSGGNVSLDVNERLGKLSQNQFGYEEFNLIDTVIMG
HRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDGYTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQ
ALFSDPDVLLLDEPTNNLDIDTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIRFEQEKKLFRNALVIENLTKG
YDTPLFKDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDIPQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWR
KPEDDDQSVRGILGRMLFGSDDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=29.9810246679317, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=28.2771535580524, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=28.2771535580524, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=29.0322580645161, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=29.0322580645161, Blast_Score=199, Evalue=4e-51,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=77.5862068965517, Blast_Score=862, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=515, Percent_Identity=31.0679611650485, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787182, Length=545, Percent_Identity=29.9082568807339, Blast_Score=214, Evalue=8e-57,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=29.9424184261036, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI1786398, Length=230, Percent_Identity=31.7391304347826, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=203, Percent_Identity=26.6009852216749, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081709, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.4678111587983, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=26.5217391304348, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17555318, Length=522, Percent_Identity=29.6934865900383, Blast_Score=239, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=31.2380952380952, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=28.8104089219331, Blast_Score=211, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6320874, Length=524, Percent_Identity=30.9160305343511, Blast_Score=249, Evalue=7e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=29.4990723562152, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6323278, Length=405, Percent_Identity=25.9259259259259, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=406, Percent_Identity=25.8620689655172, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=420, Percent_Identity=25.2380952380952, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24666836, Length=526, Percent_Identity=30.4182509505703, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=29.4455066921606, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=29.4455066921606, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24641342, Length=525, Percent_Identity=28, Blast_Score=216, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58642; Mature: 58642

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSGGNVSLDVNERLGK
CCCCCCCHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCC
LSQNQFGYEEFNLIDTVIMGHRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDG
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHCCC
YTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQALFSDPDVLLLDEPTNNLDI
CCCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIR
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHEE
FEQEKKLFRNALVIENLTKGYDTPLFKDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDI
EHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHC
PQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWRKPEDDDQSVRGILGRMLFGS
CCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV
EEECCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLDPSGGNVSLDVNERLGK
CCCCCCCHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCC
LSQNQFGYEEFNLIDTVIMGHRELWKVKQERDRIYSLPEMSEEDGITVANLEMDFAEMDG
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHCCC
YTAESRAGELLLGVGIGIDSHFGLMSEIAPGLKLRVLLAQALFSDPDVLLLDEPTNNLDI
CCCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DTIRWLQDMLNQRSSTMVIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEYMQAATQAR
HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
ERLLSDNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRVNPFIR
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHEE
FEQEKKLFRNALVIENLTKGYDTPLFKDLNLIVEVGERIAVLGENGVGKTTLLRTLIHDI
EHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHC
PQDAGTIQWSENANIGYYAQDHESDFANEMTLFEWMSQWRKPEDDDQSVRGILGRMLFGS
CCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DDIKKSVKVLSGGEKGRMLFGKLIMQKANILVLDEPTNHMDMESIESLNNALEMYEGTLI
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEE
FVSHDRAFVSSLANRILEVTHTGVNDFRGTYDEFLASKGIEV
EEECCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]