| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yaeT [H]
Identifier: 126173696
GI number: 126173696
Start: 1690427
End: 1692910
Strand: Direct
Name: yaeT [H]
Synonym: Sbal_1458
Alternate gene names: 126173696
Gene position: 1690427-1692910 (Clockwise)
Preceding gene: 126173695
Following gene: 126173697
Centisome position: 32.97
GC content: 44.69
Gene sequence:
>2484_bases ATGAGATTGAATAAACTTTTTGCCTCGATGTTATTCGTCGGTGCGTCGTTTTCAGGGACTGTGTTGGCTGATACTTTCCA ACCGTTTGAAGTGACCGACATCCAAGTTGAAGGTTTGCAGCGAGTTGCACTCGGTGCTGCCCTGTTAAGCTTACCAGTAA AAGTAGGTGACACTGTTGACCAGTTAAGAATTCAACAAGCCATTAAAAGCTTGTATGCATCGACTAACTTTGAAAATGTC TCCGTGAGCCGAGATGGCGGCGTATTAGTGGTGAAAGTCACTGAACGTCCTACCATCAGTGCCGTGACATTTGATGGCAA CAAAGACATTAAAGATGAACAGTTACAGGAAAGTCTGGACGGTTCTGGCGTTAAAGTCGGTGAGTCGCTTGATCGCACTA TGTTGACCGGTATTGAAAAGGGTCTGCAGGATTTCTACTACGGCGTGGGTAAATACGGCGCTAAAGTGGAAGCTCAAGTG ATCAACTTACCCCGTAACCGGGTTGAGCTGAAATTTAAGTTCACCGAAGGTTTAGCGGCCGAAATCCGCCAAATTAACGT GGTCGGTAATCATGAGTTCACCGATGCTGAGTTGATTGGCATGCTGGAACTTAAAGATTATGTGGCTTGGTGGGATCTGT TCGGCGAACGCCGTTATCAGAAGCAAAAGCTGCAGGCAGATCTCGAGACCATCAAAACCTATTATCACAATAAAGGTTAT ATCCGCTTTGAAGTCACCTCGACTCAAGTGGCGATGACACCTGACCGTAAAGGTTTATATATCACCATCAACGTAGATGA AGGTGAGAAATATAAAGTTAAAGAAGTAAACCTGACGGGTGATTTGATGGGCCGTGAAGAGTTGATGAAATCAATTCTGC CGATCAAAGCGGGTGATATGTACAACGGCGGTGATGTGACTTTCACCGAAGAAATGTACAGCAAATATTTAGGCCGCTTC GGTTATGCCTACCCAGAAGTCAAAACGTATCCTGAAATTGATGATAAGACTAAAGAAGTGACCTTAAACATCAATGTTAA ACCGGGTAAACGTGTTTACGTGCGTGCGATTAACTTCACTGGTAACACAGTGACCAAAGATGAAGTGATGCGCCGTGAAC TGCGTCAGATGGAAGGGGCTTGGTTAAACTCAGCGCAAGTTGAGCTTTCAAAAGCTAACCTTAACCGTCTTGGCTTTTTT GAAACCGTTGACACTGAAACGATTCAAGTGCCTGGCACTGATGATTTAGTCGATGTAGCAGTTAAAGTGAAAGAGCAGCC GTCGGGCTCATTCAACGCCGGTGTCGGTTATGGTACTGAATCAGGCCTGAGCTTGCAGTTTGGTGTGCAGCAAAATAACT TCTTAGGCACAGGAAACCAAGCAGGTATCAGTTTGAGCACCAACAAGTACTCTAAAAACGTTAACTTGTCTTATACCGAT CCCTATTGGACTAAAGACCATGTCAGTTTAGGCGGTAGTATTTATTGGAGCGAGTTTGACGCCAATGAAGCTAACTTAGA ACGTTATAAAAACAGTTCTTACGGTGTGGCGTTGAACTCGGGTTTCCCAATTAACGAATACAACCGTATCAACGGTGGTA TCGGTTATCGTCATAACACGATTTCTGAAATTTCTGCCTATGAGCAAGCGCGTCGTTTCTATAACATCTACCGTGATAAC GATCCAAATGCGGACCTAAGTTTCGATAACTTTGAACTGAGTTTGGGTTGGTCTCGTAGTACCTTGAACCGTGGGACTTT CCCAACAGACGGTTCGTCTCAACGTTTAAACGGTAAAATGACCTCGCCAGGGTCTGATTTACAGTACTTTAAGACAGACT TTGACACTAACTTCTATTTTCCTATAAACCGTAGTCAGAGCTTTGTGTTTTTGGCCCGTGGTCGATTAGGTTATGGTAAC GGTTATGGTCAGTTTAATGATAACGACCAAATTCTGCCTTTCTGGGAAAACTATTACTCAGGTGGTAGTAGCTCGCTACG TGGCTTTAAGTCAAACTCAGTCGGTCCTCGCTCCTTCTATATGTATAGTGGCAGCGAACCTTGCTTCGATCCATCCGGTG ACGGCTGCAATTTCCCTCAGCCGGATCCTGATAGTATTCAAGTGAGTTCTGGTCGCTCAATCGGTGGTAACGCCCTTGCG ACAGCGAGCATGGAGTTGATTGTACCGACGCCATTCTTGGATGAGGCTTACACAAACTCAGTGCGTACAAGTTTCTTCGT TGATGCGGGTAACGTCTGGGATACTGAGTTTGATTACGATTATTATAAAAATAGCTTGCCAGCAGACGAGTTTGCTAAGT TACAGGATTACAGTGATCCCGCTCGTTTACGCGCCTCTTGGGGCTTAAGTGTGCAGTGGTTATCACCTATGGGTCCTATG GTGTTTAGCTTAGCGTGGCCGATTAAAGAATACGAAGGCGACCAAACAGAGATCTTCTCTTTCAATATTGGCAAAACTTT TTAA
Upstream 100 bases:
>100_bases AGATTTGGGGCAGCAATACTGCTGATGTTGATGAGCATTGCGCTTTTCAATGATTTTGCCCGACTCTGAGCAAGGACAGA CTAATAATTAGAAGTGCTCT
Downstream 100 bases:
>100_bases AAGGCATACACTCGGCAAGTTTTGCTGACTATAACAAGGTAACAAGGAGTTTATTTTGAACAAGATGGTAAATCGCGCGC TGATGACGTTAGTTTTGTTA
Product: surface antigen (D15)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVELSKANLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDHVSLGGSIYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQARRFYNIYRDN DPNADLSFDNFELSLGWSRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVFLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYMYSGSEPCFDPSGDGCNFPQPDPDSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDYYKNSLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPM VFSLAWPIKEYEGDQTEIFSFNIGKTF
Sequences:
>Translated_827_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVELSKANLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDHVSLGGSIYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQARRFYNIYRDN DPNADLSFDNFELSLGWSRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVFLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYMYSGSEPCFDPSGDGCNFPQPDPDSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDYYKNSLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPM VFSLAWPIKEYEGDQTEIFSFNIGKTF >Mature_827_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVELSKANLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDHVSLGGSIYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQARRFYNIYRDN DPNADLSFDNFELSLGWSRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVFLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYMYSGSEPCFDPSGDGCNFPQPDPDSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDYYKNSLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPM VFSLAWPIKEYEGDQTEIFSFNIGKTF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=832, Percent_Identity=50.2403846153846, Blast_Score=834, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 92698; Mature: 92698
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVD CCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH QLRIQQAIKSLYASTNFENVSVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLD HHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCC GSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCE EIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY EEEEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDM EEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEECCHHHCCHHHHHHHHCCCCCCCC YNGGDVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECC GNTVTKDEVMRRELRQMEGAWLNSAQVELSKANLNRLGFFETVDTETIQVPGTDDLVDVA CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCEEECCCCCCCEEEE VKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCCEEEECC PYWTKDHVSLGGSIYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT CCCCCHHEECCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC ISEISAYEQARRFYNIYRDNDPNADLSFDNFELSLGWSRSTLNRGTFPTDGSSQRLNGKM HHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE TSPGSDLQYFKTDFDTNFYFPINRSQSFVFLARGRLGYGNGYGQFNDNDQILPFWENYYS CCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCC GGSSSLRGFKSNSVGPRSFYMYSGSEPCFDPSGDGCNFPQPDPDSIQVSSGRSIGGNALA CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDYYKNSLPADEFAKLQDYSDP EEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCH ARLRASWGLSVQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF HHEEEECCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVD CCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH QLRIQQAIKSLYASTNFENVSVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLD HHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCC GSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCCE EIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY EEEEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDM EEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEECCHHHCCHHHHHHHHCCCCCCCC YNGGDVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECC GNTVTKDEVMRRELRQMEGAWLNSAQVELSKANLNRLGFFETVDTETIQVPGTDDLVDVA CCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCEEECCCCCCCEEEE VKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCCEEEECC PYWTKDHVSLGGSIYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT CCCCCHHEECCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC ISEISAYEQARRFYNIYRDNDPNADLSFDNFELSLGWSRSTLNRGTFPTDGSSQRLNGKM HHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCEE TSPGSDLQYFKTDFDTNFYFPINRSQSFVFLARGRLGYGNGYGQFNDNDQILPFWENYYS CCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCC GGSSSLRGFKSNSVGPRSFYMYSGSEPCFDPSGDGCNFPQPDPDSIQVSSGRSIGGNALA CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDYYKNSLPADEFAKLQDYSDP EEEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCH ARLRASWGLSVQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF HHEEEECCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA