| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173542
Identifier: 126173542
GI number: 126173542
Start: 1484836
End: 1485528
Strand: Direct
Name: 126173542
Synonym: Sbal_1304
Alternate gene names: NA
Gene position: 1484836-1485528 (Clockwise)
Preceding gene: 126173541
Following gene: 126173543
Centisome position: 28.96
GC content: 43.58
Gene sequence:
>693_bases ATGGTGGACACTAACGCAAGATTTATCTCTAGAGCCTACATTAATGATAAAAAGGTCGATATGACGGATCATTGGCTCAT GCTGAAAGATAACTCGCCAGGTAATTGTCAGCTAAAGGTTAAATCCGCCCCAAATAAGCTTGATATTGTCGCCGTCGATT TAGGTTGGGGAGAAATGATAGACAGAGTATTTATTGGCTATGTTGAGCGTGTTATGCCAGCTGAAGCGGGGTGGAGTCTT ATTTTTTGCCGTGAAGTGGCCGCATCTTTGGCATTTAACTTAAGCGTGATGTTACGTCACCCAACATTGCGTCAAGTGAT TAGCGAGATAAGCGAGCAAACGGGCCTCGAATTTGTATTACCAGACAAGCCTTATTCAGATACAGCTATCCCTTGTTTTT ACTGCGACAGCTCAGGCTATGCCATGCTCGACAACCTTGGGCGTACTTACAAGGTGCCTGACTTTATCTGGCAACAGCAG GGCAATGGAAAAATCTATTTAGGCAGTTATCAAGATTCATTTTGGCATGATAAGCCAATCATCATTCCTAATAATTTAAT GACTAATCATCAGGCTGGTAAAACAGTTAGCATGCCAGCCGCGCCAATGGTCAGGCCAAATGTAACAGCCAACAATGAGC GCATTAAAAGCGTGGAGTTTAAAGGCACCAACATGACAATAACGTGGGGGTAA
Upstream 100 bases:
>100_bases ATACTGCCGCAGCACAACAAGGTGGCGCGGATGACGGTTTTAAATATGCCAGTTTACAAGAGAACCTTGCCGCAAATTTC GGCAAACTGAGATCGACATA
Downstream 100 bases:
>100_bases TGTGCAAAAGGTCATTGAAAACATTATAAACAGATTATTTCCAGAGCTTACCGCTAAGCTGCACTTACCGCGCTGGGGTA AAGTCGTCGCTTTGCCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MVDTNARFISRAYINDKKVDMTDHWLMLKDNSPGNCQLKVKSAPNKLDIVAVDLGWGEMIDRVFIGYVERVMPAEAGWSL IFCREVAASLAFNLSVMLRHPTLRQVISEISEQTGLEFVLPDKPYSDTAIPCFYCDSSGYAMLDNLGRTYKVPDFIWQQQ GNGKIYLGSYQDSFWHDKPIIIPNNLMTNHQAGKTVSMPAAPMVRPNVTANNERIKSVEFKGTNMTITWG
Sequences:
>Translated_230_residues MVDTNARFISRAYINDKKVDMTDHWLMLKDNSPGNCQLKVKSAPNKLDIVAVDLGWGEMIDRVFIGYVERVMPAEAGWSL IFCREVAASLAFNLSVMLRHPTLRQVISEISEQTGLEFVLPDKPYSDTAIPCFYCDSSGYAMLDNLGRTYKVPDFIWQQQ GNGKIYLGSYQDSFWHDKPIIIPNNLMTNHQAGKTVSMPAAPMVRPNVTANNERIKSVEFKGTNMTITWG >Mature_230_residues MVDTNARFISRAYINDKKVDMTDHWLMLKDNSPGNCQLKVKSAPNKLDIVAVDLGWGEMIDRVFIGYVERVMPAEAGWSL IFCREVAASLAFNLSVMLRHPTLRQVISEISEQTGLEFVLPDKPYSDTAIPCFYCDSSGYAMLDNLGRTYKVPDFIWQQQ GNGKIYLGSYQDSFWHDKPIIIPNNLMTNHQAGKTVSMPAAPMVRPNVTANNERIKSVEFKGTNMTITWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25976; Mature: 25976
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTNARFISRAYINDKKVDMTDHWLMLKDNSPGNCQLKVKSAPNKLDIVAVDLGWGEMI CCCCCHHEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCHHHHH DRVFIGYVERVMPAEAGWSLIFCREVAASLAFNLSVMLRHPTLRQVISEISEQTGLEFVL HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHCCCEEEE PDKPYSDTAIPCFYCDSSGYAMLDNLGRTYKVPDFIWQQQGNGKIYLGSYQDSFWHDKPI CCCCCCCCCEEEEEECCCCCEEHHCCCCEEECCHHHEEECCCCEEEECCCCCCCCCCCCE IIPNNLMTNHQAGKTVSMPAAPMVRPNVTANNERIKSVEFKGTNMTITWG EECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC >Mature Secondary Structure MVDTNARFISRAYINDKKVDMTDHWLMLKDNSPGNCQLKVKSAPNKLDIVAVDLGWGEMI CCCCCHHEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEEECCHHHHH DRVFIGYVERVMPAEAGWSLIFCREVAASLAFNLSVMLRHPTLRQVISEISEQTGLEFVL HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHCCCEEEE PDKPYSDTAIPCFYCDSSGYAMLDNLGRTYKVPDFIWQQQGNGKIYLGSYQDSFWHDKPI CCCCCCCCCEEEEEECCCCCEEHHCCCCEEECCHHHEEECCCCEEEECCCCCCCCCCCCE IIPNNLMTNHQAGKTVSMPAAPMVRPNVTANNERIKSVEFKGTNMTITWG EECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA