| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173540
Identifier: 126173540
GI number: 126173540
Start: 1482032
End: 1484338
Strand: Direct
Name: 126173540
Synonym: Sbal_1302
Alternate gene names: NA
Gene position: 1482032-1484338 (Clockwise)
Preceding gene: 126173539
Following gene: 126173541
Centisome position: 28.9
GC content: 41.31
Gene sequence:
>2307_bases ATGGCACAAGTGATCACATTAGCAGGCGAACGTTTATTTGCACTCAAAGCCCAAAACAACCAGCAGTTAGACATTGATAC CTTTATTTTTGCCTATGTGCCGGGGCAAGACTCCACCGTCGACATTGACCGCAATGAAGGATTACCGCCAATCGGCCAAC GTGTGCACACTCAGATAGTGCAGCAATACGGCATGATTAATGAAAACGCCGTGGTGTATAGCTCAGTACTCGACAGCTTA ACGGGACCATTCCAATTTAACTGGGTTGGACTGTATTCAGCCGTTAACCAAACACTGATCGCCATTCAGCATATTCCTAC TGTGAGCAAGACAGTCACCGAGCCGGGCGCATCGGGTAACATCCTTAACCGCAACTTTGTGATCGAGTACAGTGGCATTG CCGAGTTAACAGGGATTACCGTTGACCCTGAAACATGGCAACTTGATTACACCGCCCGCCTAAATGGCATGGACGAACTT ACCCGCCAACTGGCAGCCGACATGAACGGCAAAGACTGGTTTATTGAAGACGGTTTTAAAGTGGTGCCACGCTCAACACT CAACACCTTTAAAGTGACAGCTGGCGCGGGTTATGTCTCGGGCCTGCGCGTGACATTGGCCGCGGATCATATCCTCACCT TAAGCAGTTACCCGCAGTTTGTTTACGTGGATGCATGGTTTGACGGCACCAGCGAGAGCGTATGGAAAGCCCAAACAGCA TTTACCGTGACCAACACCGAAATGGACGACTATATCGACGTCAATGGCCGCAACCATTATGTGTTTAAACTAGCGCGCAT CACCGCCGCAGATGCAGTGGAAGATTTGCGCAATGTTAATGGTTTAGCTGAAAAAATTAATAAATTAGATGATGATTTTT ATGGGAGTAAATATATCCCTGCAAATGACATCCGAAAATATGGGGCGATTGCAGGGGGGGACCATACTAATGCAATATTA GCATCACTAGAAAATAATGGTTCGGCGACATTAGAGAAAAATACTTTTCCAGTGTCTATATCATTACCTATAGATGTAGC AGAAGACAATATTATTGATTTACAGGGAAACGAATTAATCATTCTTCCTAATTTTGTGAGTAATACCGATAAAACACTTT TTAATCATGTTGGTAATCGTGGGAAAGTGTTGAATGTTAACTGCCAAAATATTGGAGCAGATACAGCTTTAATTGGTTAT ACAAATGCTGATTTCTGCTATGAAAGCGGGTGTAAAACGGGAAGGGGGGCAAAAAATTTAGTAAGATATCAAGGTGTTAC CAATAGAAACTATTCAGAATCTCTTAGTATTTTATCAAGTGCTAAAACTGAGCAAGAAGGAAATTTGCGGAAATACACAA CCCGTGTATCAGCAAGTAACAATTCTTTAACCTTTCACCGTTCAAGGTTTTTTCCTAGTCGTTGTTATATTTCACATATA AAAGTCACTGATATAAATGGTTCGCCAAATTTCTATTTTGACCTAGCTATGCACAAAGGTAACGGGTTTGTATTTCCTTT CATCAGACCAGCAGGGACTTCAAATATTGACCAACCAATGTCAATAGATTGGTTTTATGACTCATTCGACGACCTGTTTT CGTTCGACATTCAAAACTTAAAAGGCACCGCAACTGAGTTTGAGATAGAGATTTTTTATACTGAATCTAAATTCGGACGC GATGATATTGTTTGGGCATATCAATCTATAAATGATTTTAATCGCCCGCATTTCTACGGTGCATCAACAATACTAGAGGC AGTTAGATCACCTGAGTTTCGTAGTCATATTGTCGGAGGTAGTGATATTGATGCAAGAATAGCTAAGACAAACAAATCAT TAGTAAATAATTACCATTTTCCTGAAACGACAATCCCAACGCCTTCAGGAACGCAAGATATTACTGATACATGCGAGCTT AAGTTTTACTTCAATTTTTCAGCAGGAATGGCTCTGTTAAGTGGCGCTACTCACGTTAGATTTCGTGTGTATCAACAAAC TAGAAATATAAAGTGCTCTGTTTTAAATGGGTTTTTATCACAAGTTCCCGATTGGGCAAGCGCCCCGCCACACTTAGCAG CCTCATATCAGCCTGTTATTGAGGTTAATATTTCTGGGGCTTCTAGGGACGCTCCTGTAGAAATTATAATTCCTCTGGAT AAAAAAGCGATGATGAATGCTGTTATAGAAGAGGCTAATCAAGACCTGAAATTTTTCTATTTAACTTTCTACAAAAATGC CGCTGATCATTTGCCTATAGTATGGGGCGATGTGTGGGAATGGGATTGTGAGTTTTTAAGGGTTTAA
Upstream 100 bases:
>100_bases ACACCAGCCTATTGCCAGCAAAACGCTTTATGACGATGGACTGCGACTCTAGCTACCACGTTGCACGCATCAAACAGAAT TAAACAAAGGAACCCATACC
Downstream 100 bases:
>100_bases ATGATGCTTGTATTAAATTCAATAAATATAACTCTTAAATCTTTACGGATCACAGCCAGCCAAGAGCTGGCGACTGAGGA CGCTAGCGGCCAAAGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Fiber Repeat 2-Containing Protein; Phage-Related Tail Fiber Protein; Phage Tail Fiber-Like Protein; Prophage; Tail Fiber; Tail Collar Domain Protein; Phage Tail Fiber Repeat; Tail Fiber Protein H
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MAQVITLAGERLFALKAQNNQQLDIDTFIFAYVPGQDSTVDIDRNEGLPPIGQRVHTQIVQQYGMINENAVVYSSVLDSL TGPFQFNWVGLYSAVNQTLIAIQHIPTVSKTVTEPGASGNILNRNFVIEYSGIAELTGITVDPETWQLDYTARLNGMDEL TRQLAADMNGKDWFIEDGFKVVPRSTLNTFKVTAGAGYVSGLRVTLAADHILTLSSYPQFVYVDAWFDGTSESVWKAQTA FTVTNTEMDDYIDVNGRNHYVFKLARITAADAVEDLRNVNGLAEKINKLDDDFYGSKYIPANDIRKYGAIAGGDHTNAIL ASLENNGSATLEKNTFPVSISLPIDVAEDNIIDLQGNELIILPNFVSNTDKTLFNHVGNRGKVLNVNCQNIGADTALIGY TNADFCYESGCKTGRGAKNLVRYQGVTNRNYSESLSILSSAKTEQEGNLRKYTTRVSASNNSLTFHRSRFFPSRCYISHI KVTDINGSPNFYFDLAMHKGNGFVFPFIRPAGTSNIDQPMSIDWFYDSFDDLFSFDIQNLKGTATEFEIEIFYTESKFGR DDIVWAYQSINDFNRPHFYGASTILEAVRSPEFRSHIVGGSDIDARIAKTNKSLVNNYHFPETTIPTPSGTQDITDTCEL KFYFNFSAGMALLSGATHVRFRVYQQTRNIKCSVLNGFLSQVPDWASAPPHLAASYQPVIEVNISGASRDAPVEIIIPLD KKAMMNAVIEEANQDLKFFYLTFYKNAADHLPIVWGDVWEWDCEFLRV
Sequences:
>Translated_768_residues MAQVITLAGERLFALKAQNNQQLDIDTFIFAYVPGQDSTVDIDRNEGLPPIGQRVHTQIVQQYGMINENAVVYSSVLDSL TGPFQFNWVGLYSAVNQTLIAIQHIPTVSKTVTEPGASGNILNRNFVIEYSGIAELTGITVDPETWQLDYTARLNGMDEL TRQLAADMNGKDWFIEDGFKVVPRSTLNTFKVTAGAGYVSGLRVTLAADHILTLSSYPQFVYVDAWFDGTSESVWKAQTA FTVTNTEMDDYIDVNGRNHYVFKLARITAADAVEDLRNVNGLAEKINKLDDDFYGSKYIPANDIRKYGAIAGGDHTNAIL ASLENNGSATLEKNTFPVSISLPIDVAEDNIIDLQGNELIILPNFVSNTDKTLFNHVGNRGKVLNVNCQNIGADTALIGY TNADFCYESGCKTGRGAKNLVRYQGVTNRNYSESLSILSSAKTEQEGNLRKYTTRVSASNNSLTFHRSRFFPSRCYISHI KVTDINGSPNFYFDLAMHKGNGFVFPFIRPAGTSNIDQPMSIDWFYDSFDDLFSFDIQNLKGTATEFEIEIFYTESKFGR DDIVWAYQSINDFNRPHFYGASTILEAVRSPEFRSHIVGGSDIDARIAKTNKSLVNNYHFPETTIPTPSGTQDITDTCEL KFYFNFSAGMALLSGATHVRFRVYQQTRNIKCSVLNGFLSQVPDWASAPPHLAASYQPVIEVNISGASRDAPVEIIIPLD KKAMMNAVIEEANQDLKFFYLTFYKNAADHLPIVWGDVWEWDCEFLRV >Mature_767_residues AQVITLAGERLFALKAQNNQQLDIDTFIFAYVPGQDSTVDIDRNEGLPPIGQRVHTQIVQQYGMINENAVVYSSVLDSLT GPFQFNWVGLYSAVNQTLIAIQHIPTVSKTVTEPGASGNILNRNFVIEYSGIAELTGITVDPETWQLDYTARLNGMDELT RQLAADMNGKDWFIEDGFKVVPRSTLNTFKVTAGAGYVSGLRVTLAADHILTLSSYPQFVYVDAWFDGTSESVWKAQTAF TVTNTEMDDYIDVNGRNHYVFKLARITAADAVEDLRNVNGLAEKINKLDDDFYGSKYIPANDIRKYGAIAGGDHTNAILA SLENNGSATLEKNTFPVSISLPIDVAEDNIIDLQGNELIILPNFVSNTDKTLFNHVGNRGKVLNVNCQNIGADTALIGYT NADFCYESGCKTGRGAKNLVRYQGVTNRNYSESLSILSSAKTEQEGNLRKYTTRVSASNNSLTFHRSRFFPSRCYISHIK VTDINGSPNFYFDLAMHKGNGFVFPFIRPAGTSNIDQPMSIDWFYDSFDDLFSFDIQNLKGTATEFEIEIFYTESKFGRD DIVWAYQSINDFNRPHFYGASTILEAVRSPEFRSHIVGGSDIDARIAKTNKSLVNNYHFPETTIPTPSGTQDITDTCELK FYFNFSAGMALLSGATHVRFRVYQQTRNIKCSVLNGFLSQVPDWASAPPHLAASYQPVIEVNISGASRDAPVEIIIPLDK KAMMNAVIEEANQDLKFFYLTFYKNAADHLPIVWGDVWEWDCEFLRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85702; Mature: 85571
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVITLAGERLFALKAQNNQQLDIDTFIFAYVPGQDSTVDIDRNEGLPPIGQRVHTQIV CCEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH QQYGMINENAVVYSSVLDSLTGPFQFNWVGLYSAVNQTLIAIQHIPTVSKTVTEPGASGN HHHCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHEEEEECCCCCHHHHCCCCCCCC ILNRNFVIEYSGIAELTGITVDPETWQLDYTARLNGMDELTRQLAADMNGKDWFIEDGFK EECCEEEEEECCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCE VVPRSTLNTFKVTAGAGYVSGLRVTLAADHILTLSSYPQFVYVDAWFDGTSESVWKAQTA EECCCCCCEEEEEECCCCCCCEEEEEEECEEEEECCCCCEEEEEEEECCCCCCCEEEEEE FTVTNTEMDDYIDVNGRNHYVFKLARITAADAVEDLRNVNGLAEKINKLDDDFYGSKYIP EEEECCCCCCEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ANDIRKYGAIAGGDHTNAILASLENNGSATLEKNTFPVSISLPIDVAEDNIIDLQGNELI HHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCEEEEEEEEEEEECCCCEEEECCCEEE ILPNFVSNTDKTLFNHVGNRGKVLNVNCQNIGADTALIGYTNADFCYESGCKTGRGAKNL EECCCCCCCHHHHHHHCCCCCCEEEEEHHCCCCCEEEEEECCCCHHHHCCCCCCCCHHHH VRYQGVTNRNYSESLSILSSAKTEQEGNLRKYTTRVSASNNSLTFHRSRFFPSRCYISHI HEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEEE KVTDINGSPNFYFDLAMHKGNGFVFPFIRPAGTSNIDQPMSIDWFYDSFDDLFSFDIQNL EEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC KGTATEFEIEIFYTESKFGRDDIVWAYQSINDFNRPHFYGASTILEAVRSPEFRSHIVGG CCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCHHHHCCCC SDIDARIAKTNKSLVNNYHFPETTIPTPSGTQDITDTCELKFYFNFSAGMALLSGATHVR CCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCEEE FRVYQQTRNIKCSVLNGFLSQVPDWASAPPHLAASYQPVIEVNISGASRDAPVEIIIPLD EEEEECCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC KKAMMNAVIEEANQDLKFFYLTFYKNAADHLPIVWGDVWEWDCEFLRV HHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCEEEECC >Mature Secondary Structure AQVITLAGERLFALKAQNNQQLDIDTFIFAYVPGQDSTVDIDRNEGLPPIGQRVHTQIV CEEEEECCCEEEEEECCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH QQYGMINENAVVYSSVLDSLTGPFQFNWVGLYSAVNQTLIAIQHIPTVSKTVTEPGASGN HHHCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHEEEEECCCCCHHHHCCCCCCCC ILNRNFVIEYSGIAELTGITVDPETWQLDYTARLNGMDELTRQLAADMNGKDWFIEDGFK EECCEEEEEECCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCE VVPRSTLNTFKVTAGAGYVSGLRVTLAADHILTLSSYPQFVYVDAWFDGTSESVWKAQTA EECCCCCCEEEEEECCCCCCCEEEEEEECEEEEECCCCCEEEEEEEECCCCCCCEEEEEE FTVTNTEMDDYIDVNGRNHYVFKLARITAADAVEDLRNVNGLAEKINKLDDDFYGSKYIP EEEECCCCCCEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ANDIRKYGAIAGGDHTNAILASLENNGSATLEKNTFPVSISLPIDVAEDNIIDLQGNELI HHHHHHHCCCCCCCCCCEEEEEECCCCCEEEECCEEEEEEEEEEEECCCCEEEECCCEEE ILPNFVSNTDKTLFNHVGNRGKVLNVNCQNIGADTALIGYTNADFCYESGCKTGRGAKNL EECCCCCCCHHHHHHHCCCCCCEEEEEHHCCCCCEEEEEECCCCHHHHCCCCCCCCHHHH VRYQGVTNRNYSESLSILSSAKTEQEGNLRKYTTRVSASNNSLTFHRSRFFPSRCYISHI HEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEEEE KVTDINGSPNFYFDLAMHKGNGFVFPFIRPAGTSNIDQPMSIDWFYDSFDDLFSFDIQNL EEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHCC KGTATEFEIEIFYTESKFGRDDIVWAYQSINDFNRPHFYGASTILEAVRSPEFRSHIVGG CCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCHHHHCCCC SDIDARIAKTNKSLVNNYHFPETTIPTPSGTQDITDTCELKFYFNFSAGMALLSGATHVR CCCCCEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCEEE FRVYQQTRNIKCSVLNGFLSQVPDWASAPPHLAASYQPVIEVNISGASRDAPVEIIIPLD EEEEECCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECC KKAMMNAVIEEANQDLKFFYLTFYKNAADHLPIVWGDVWEWDCEFLRV HHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA