| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173539
Identifier: 126173539
GI number: 126173539
Start: 1481382
End: 1482014
Strand: Direct
Name: 126173539
Synonym: Sbal_1301
Alternate gene names: NA
Gene position: 1481382-1482014 (Clockwise)
Preceding gene: 126173538
Following gene: 126173540
Centisome position: 28.89
GC content: 51.66
Gene sequence:
>633_bases ATGAGTATCAACATCGACTGGGCAGTACTCACCAAAATGCCGTACTGGCTGGCACGTCCAGCCAGCGAGTTAGACAAACT GCGTAAAGGCGCTGTGCGTTTTTGGCAGCGCTTTGTCGATATGCTCGCATTCCCCGCTAAGCAGCTCGACCCCATGACAG CAGAGCTTGAATTTGTGCACTTGCTAGCATGGGAGCGGGATATAGAGCAAATCCCCAGTGAAACCGAACTCATGTACCGC ACGCGGGTGAAATACGCCTTGCCGTTCGCCAAGGGCGCGGGCAGCAAAAGCGGCTGGTTAGATATGTTTAAAAAACTCGG CATGACATGGGTGGTCATAGATGAGCGCATCAGCCAAACGGATTGGGACGTGGTGGATCTGCAGTTGCTTGATAGCGACT TTGGCAACCGCCAAAAGCTGATTGACTACATTTGCCGCCAATACGGACGCACTACGCGCCGCTATCAGCTGACCACCATT TCAAAAATGCCGCTGATCGCACCGCTAAAAAGCTTTGATCATCAGCACACAGTTAACACGGCAACAGCTAACACCAGCCT ATTGCCAGCAAAACGCTTTATGACGATGGACTGCGACTCTAGCTACCACGTTGCACGCATCAAACAGAATTAA
Upstream 100 bases:
>100_bases TTGCGGGTATCGAGTCGCTCAACTGGCACCAAATCGATATCACCAGCGCCAACAACGTGCCGCGCTTAAGCACGCTCACC ATCGAAAATGGTAACGAGCT
Downstream 100 bases:
>100_bases ACAAAGGAACCCATACCATGGCACAAGTGATCACATTAGCAGGCGAACGTTTATTTGCACTCAAAGCCCAAAACAACCAG CAGTTAGACATTGATACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSINIDWAVLTKMPYWLARPASELDKLRKGAVRFWQRFVDMLAFPAKQLDPMTAELEFVHLLAWERDIEQIPSETELMYR TRVKYALPFAKGAGSKSGWLDMFKKLGMTWVVIDERISQTDWDVVDLQLLDSDFGNRQKLIDYICRQYGRTTRRYQLTTI SKMPLIAPLKSFDHQHTVNTATANTSLLPAKRFMTMDCDSSYHVARIKQN
Sequences:
>Translated_210_residues MSINIDWAVLTKMPYWLARPASELDKLRKGAVRFWQRFVDMLAFPAKQLDPMTAELEFVHLLAWERDIEQIPSETELMYR TRVKYALPFAKGAGSKSGWLDMFKKLGMTWVVIDERISQTDWDVVDLQLLDSDFGNRQKLIDYICRQYGRTTRRYQLTTI SKMPLIAPLKSFDHQHTVNTATANTSLLPAKRFMTMDCDSSYHVARIKQN >Mature_209_residues SINIDWAVLTKMPYWLARPASELDKLRKGAVRFWQRFVDMLAFPAKQLDPMTAELEFVHLLAWERDIEQIPSETELMYRT RVKYALPFAKGAGSKSGWLDMFKKLGMTWVVIDERISQTDWDVVDLQLLDSDFGNRQKLIDYICRQYGRTTRRYQLTTIS KMPLIAPLKSFDHQHTVNTATANTSLLPAKRFMTMDCDSSYHVARIKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24516; Mature: 24385
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINIDWAVLTKMPYWLARPASELDKLRKGAVRFWQRFVDMLAFPAKQLDPMTAELEFVH CEEECCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHH LLAWERDIEQIPSETELMYRTRVKYALPFAKGAGSKSGWLDMFKKLGMTWVVIDERISQT HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC DWDVVDLQLLDSDFGNRQKLIDYICRQYGRTTRRYQLTTISKMPLIAPLKSFDHQHTVNT CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCC ATANTSLLPAKRFMTMDCDSSYHVARIKQN CCCCCCCCCHHHEEEECCCCCEEEEEEECC >Mature Secondary Structure SINIDWAVLTKMPYWLARPASELDKLRKGAVRFWQRFVDMLAFPAKQLDPMTAELEFVH EEECCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHH LLAWERDIEQIPSETELMYRTRVKYALPFAKGAGSKSGWLDMFKKLGMTWVVIDERISQT HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC DWDVVDLQLLDSDFGNRQKLIDYICRQYGRTTRRYQLTTISKMPLIAPLKSFDHQHTVNT CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCC ATANTSLLPAKRFMTMDCDSSYHVARIKQN CCCCCCCCCHHHEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA