| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173529
Identifier: 126173529
GI number: 126173529
Start: 1475575
End: 1476024
Strand: Direct
Name: 126173529
Synonym: Sbal_1291
Alternate gene names: NA
Gene position: 1475575-1476024 (Clockwise)
Preceding gene: 126173528
Following gene: 126173530
Centisome position: 28.78
GC content: 49.33
Gene sequence:
>450_bases ATGCGTTTATCTGGAATGAATTTTAACGTCACCATGGGCGACACCATGATCCACGTTGACACTTGCACCTTAACCATCAC CGACAACAGCGCGGTCAGCCAAACCAGCGGCGTACCTGACGGATATGTCGACGGCGACGTCGCGGCCAGCGGTGAACTGT CAGTCAATGCCAGCCAATTTGACCTTATCTCAAACGAGGCTAAATCAGCAGGTTCTTGGCGCGGTATGAAAGTGTTCGAC ATGATGTTTTACGGCAAAACCGCCAAGGATGAAGTGAAGGTTGAAGCGTTCGGATGTCGCATCAAGTTAAGCGACTTGCT CGACGTTGACAAAAAAGGCGGCCAAGCCAGTTTGTTCAAAATCCCGTTTGATGTAACGGATCCTGATTTTGTGCATATCA ACGGCGTGCCATACCTGCGCCCAGAAGAAATCGAAAACATTAAGCAGTAA
Upstream 100 bases:
>100_bases AGCGGTGACCATTTACATGATCATCCGTCCGTACAACAGCCCGAAAGAAATCACCGTCAACATTCTGCTTGACCTAAGCA ATCAATAAGGAGTCGCCGCC
Downstream 100 bases:
>100_bases GGCGCAATAACGAATGGATGCAGTGGATTTAGTCACCCGTGAGCAGCTACGCGCAGAGCACCGCTTCGAACAGCAACGCA AAGCACTCGCCGCCAAGCCA
Product: prophage PSPPH06 tail tube protein
Products: NA
Alternate protein names: Phage Protein; Phage Gene; Tail Tube; Tail Tube Protein; Tail Tube Protein Bacteriophage Origin; Phage Tail Tube Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MRLSGMNFNVTMGDTMIHVDTCTLTITDNSAVSQTSGVPDGYVDGDVAASGELSVNASQFDLISNEAKSAGSWRGMKVFD MMFYGKTAKDEVKVEAFGCRIKLSDLLDVDKKGGQASLFKIPFDVTDPDFVHINGVPYLRPEEIENIKQ
Sequences:
>Translated_149_residues MRLSGMNFNVTMGDTMIHVDTCTLTITDNSAVSQTSGVPDGYVDGDVAASGELSVNASQFDLISNEAKSAGSWRGMKVFD MMFYGKTAKDEVKVEAFGCRIKLSDLLDVDKKGGQASLFKIPFDVTDPDFVHINGVPYLRPEEIENIKQ >Mature_149_residues MRLSGMNFNVTMGDTMIHVDTCTLTITDNSAVSQTSGVPDGYVDGDVAASGELSVNASQFDLISNEAKSAGSWRGMKVFD MMFYGKTAKDEVKVEAFGCRIKLSDLLDVDKKGGQASLFKIPFDVTDPDFVHINGVPYLRPEEIENIKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16252; Mature: 16252
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSGMNFNVTMGDTMIHVDTCTLTITDNSAVSQTSGVPDGYVDGDVAASGELSVNASQF CEECCCEEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEECCHHE DLISNEAKSAGSWRGMKVFDMMFYGKTAKDEVKVEAFGCRIKLSDLLDVDKKGGQASLFK EEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEHHHCCCCCCCCCEEEEE IPFDVTDPDFVHINGVPYLRPEEIENIKQ EECCCCCCCEEEECCCCCCCHHHHHHCCC >Mature Secondary Structure MRLSGMNFNVTMGDTMIHVDTCTLTITDNSAVSQTSGVPDGYVDGDVAASGELSVNASQF CEECCCEEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEECCHHE DLISNEAKSAGSWRGMKVFDMMFYGKTAKDEVKVEAFGCRIKLSDLLDVDKKGGQASLFK EEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEHHHCCCCCCCCCEEEEE IPFDVTDPDFVHINGVPYLRPEEIENIKQ EECCCCCCCEEEECCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA