| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173528
Identifier: 126173528
GI number: 126173528
Start: 1474456
End: 1475562
Strand: Direct
Name: 126173528
Synonym: Sbal_1290
Alternate gene names: NA
Gene position: 1474456-1475562 (Clockwise)
Preceding gene: 126173527
Following gene: 126173529
Centisome position: 28.76
GC content: 54.2
Gene sequence:
>1107_bases ATGTCACTAGGTAAAGTACAGGTAAACAATCTCAATCAAGGCCAAGGTGACATTCAAGCCATCGAGCGCCACTTCCTATT TATCGGCCGTGCAGGTCATGTAGATGAAGAAAGCCAGCTATTTAGCATCGGCGCGCAAACCGATATCGAGGCGAACTTTG CTGATAGCGCCTTGCGTAAACAGTTGATCGCCGCCCAGCTTAATGCGGGGCAAGACTGGACCGCCGCCGTGTATCCACTC GCCGCCGATGAAGACTTATTCGACGCCATCACCGCCGCCAACGAAGTGCAGAGTTTTGAAATGGTGGTGTTCTGTGACGT CACAATCAGCGCAGCAAACCTAAGCGCCAAGCATGATTACTTAGCCAGTCTGCAAGCCAGCCACGGCCGCTTTGTATCAG GCCTCGTCGCCGTTGCGGGTATCGATGTTGCCACTCAAACATGGCCGCAGTACGAAACCGCAATGGTGGGACTGCAAGCG GGTATTGCCGCGCACTTAGTCATCCCTGTGCCGCAGCTGCATGGCAATAACGTCGGCGTACTCGCTGGCCGCTTATGCAA TCGTGCCGTCAGCATTGCCGACAGCCCAATGCGCGTCGCCACGGGCTCAGTGATGGGTTTAGGCGTTGCGCCGATTGATA GCGCCGAAAAACCGCTCACGCTCGCCACGCTCGAAACCTTAGCCAATGCGCGCTTTAGCGTGCCGCAGTGGTATCCAGAT TCGCAAGGCATCTACTGGGGCGACGGCACCACGCTCGACGCCGCAGGCGGTGATTATCAATACATTGAGCATTTGCGCCC TGTACACAAAGCCAGCCGCGAAGTGCGTATTTTAGCGATTCGCCGCATTGCCAACCGCGCGCTTAACTCAACGCCTACCA GTATTGAGCAAAACAAAGCCTACTTTATGAAGCCGCTGCGCAATATGAGCAAAAGCACAGTGATTTTGGGTACGCAGTTC CCAGGTGATATTCAGCCGCCACGCGATGGCGACATCACCATTGTGTGGACCAGTAACAAAGCGGTGACCATTTACATGAT CATCCGTCCGTACAACAGCCCGAAAGAAATCACCGTCAACATTCTGCTTGACCTAAGCAATCAATAA
Upstream 100 bases:
>100_bases CCGTCGCCGCGCGGCCGTTCCTTGGCGACAGCGCCGATAACGTCCAGCGTCAGCTAGTCAGCATCATCGAGCAAATTAAT CAGAGACAAAGGGGCTAAAA
Downstream 100 bases:
>100_bases GGAGTCGCCGCCATGCGTTTATCTGGAATGAATTTTAACGTCACCATGGGCGACACCATGATCCACGTTGACACTTGCAC CTTAACCATCACCGACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Sheath Protein; Phage Gene; Phage Protein; Tail Sheath; Tail Sheath Protein Bacteriophage Origin; Biotin Carboxylase; Tail Sheat Protein
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSLGKVQVNNLNQGQGDIQAIERHFLFIGRAGHVDEESQLFSIGAQTDIEANFADSALRKQLIAAQLNAGQDWTAAVYPL AADEDLFDAITAANEVQSFEMVVFCDVTISAANLSAKHDYLASLQASHGRFVSGLVAVAGIDVATQTWPQYETAMVGLQA GIAAHLVIPVPQLHGNNVGVLAGRLCNRAVSIADSPMRVATGSVMGLGVAPIDSAEKPLTLATLETLANARFSVPQWYPD SQGIYWGDGTTLDAAGGDYQYIEHLRPVHKASREVRILAIRRIANRALNSTPTSIEQNKAYFMKPLRNMSKSTVILGTQF PGDIQPPRDGDITIVWTSNKAVTIYMIIRPYNSPKEITVNILLDLSNQ
Sequences:
>Translated_368_residues MSLGKVQVNNLNQGQGDIQAIERHFLFIGRAGHVDEESQLFSIGAQTDIEANFADSALRKQLIAAQLNAGQDWTAAVYPL AADEDLFDAITAANEVQSFEMVVFCDVTISAANLSAKHDYLASLQASHGRFVSGLVAVAGIDVATQTWPQYETAMVGLQA GIAAHLVIPVPQLHGNNVGVLAGRLCNRAVSIADSPMRVATGSVMGLGVAPIDSAEKPLTLATLETLANARFSVPQWYPD SQGIYWGDGTTLDAAGGDYQYIEHLRPVHKASREVRILAIRRIANRALNSTPTSIEQNKAYFMKPLRNMSKSTVILGTQF PGDIQPPRDGDITIVWTSNKAVTIYMIIRPYNSPKEITVNILLDLSNQ >Mature_367_residues SLGKVQVNNLNQGQGDIQAIERHFLFIGRAGHVDEESQLFSIGAQTDIEANFADSALRKQLIAAQLNAGQDWTAAVYPLA ADEDLFDAITAANEVQSFEMVVFCDVTISAANLSAKHDYLASLQASHGRFVSGLVAVAGIDVATQTWPQYETAMVGLQAG IAAHLVIPVPQLHGNNVGVLAGRLCNRAVSIADSPMRVATGSVMGLGVAPIDSAEKPLTLATLETLANARFSVPQWYPDS QGIYWGDGTTLDAAGGDYQYIEHLRPVHKASREVRILAIRRIANRALNSTPTSIEQNKAYFMKPLRNMSKSTVILGTQFP GDIQPPRDGDITIVWTSNKAVTIYMIIRPYNSPKEITVNILLDLSNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39813; Mature: 39681
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGKVQVNNLNQGQGDIQAIERHFLFIGRAGHVDEESQLFSIGAQTDIEANFADSALRK CCCCCEEECCCCCCCHHHHHHHHHEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHH QLIAAQLNAGQDWTAAVYPLAADEDLFDAITAANEVQSFEMVVFCDVTISAANLSAKHDY HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHH LASLQASHGRFVSGLVAVAGIDVATQTWPQYETAMVGLQAGIAAHLVIPVPQLHGNNVGV HHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCEEE LAGRLCNRAVSIADSPMRVATGSVMGLGVAPIDSAEKPLTLATLETLANARFSVPQWYPD HHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCCCCC SQGIYWGDGTTLDAAGGDYQYIEHLRPVHKASREVRILAIRRIANRALNSTPTSIEQNKA CCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHH YFMKPLRNMSKSTVILGTQFPGDIQPPRDGDITIVWTSNKAVTIYMIIRPYNSPKEITVN HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCEEEEE ILLDLSNQ EEEEECCC >Mature Secondary Structure SLGKVQVNNLNQGQGDIQAIERHFLFIGRAGHVDEESQLFSIGAQTDIEANFADSALRK CCCCEEECCCCCCCHHHHHHHHHEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHH QLIAAQLNAGQDWTAAVYPLAADEDLFDAITAANEVQSFEMVVFCDVTISAANLSAKHDY HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHH LASLQASHGRFVSGLVAVAGIDVATQTWPQYETAMVGLQAGIAAHLVIPVPQLHGNNVGV HHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCEEE LAGRLCNRAVSIADSPMRVATGSVMGLGVAPIDSAEKPLTLATLETLANARFSVPQWYPD HHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCCCCCC SQGIYWGDGTTLDAAGGDYQYIEHLRPVHKASREVRILAIRRIANRALNSTPTSIEQNKA CCCEEECCCCEEECCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHH YFMKPLRNMSKSTVILGTQFPGDIQPPRDGDITIVWTSNKAVTIYMIIRPYNSPKEITVN HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCEEEEE ILLDLSNQ EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA