| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173523
Identifier: 126173523
GI number: 126173523
Start: 1471410
End: 1472000
Strand: Direct
Name: 126173523
Synonym: Sbal_1285
Alternate gene names: NA
Gene position: 1471410-1472000 (Clockwise)
Preceding gene: 126173522
Following gene: 126173524
Centisome position: 28.7
GC content: 54.31
Gene sequence:
>591_bases ATGAGTGCCATCGCCGATTTTAAAAAGCGCCTTGAAGCAGCAAAACGCGCCAAAAGCCCAGCAGCTACCGAAACAACAGC CACGCCAGCGCCAGAAAACGAAGCGCTGCACTTACTTGCATATCTACTCGGCTGTGATGTTGATAGTGCCATTGAGCAAG GCCGTAATGCCGCAGAAGAAAAAGCTAAATATTCAATTGGCATTGATCTAGCGAAAGATGCAGACAAAACCGCCATTGCC ACCGTCACCACTGACGAACAAGGCAACATCGCCAGCATCATCGATCACGCTGCAGAACTCGAAGACAGCGCCGCCACTGT GACTGACGCTGCCGAAACCGCATTAGATGCCGCCGATAAAGTCAGCGAATCCGCCGACAAGGTAAGCAGCGCAGCTGGTG ATCTCGAATCCGCCGCCAGCTCAGTCGACGACAGCGCCAGCAATTTAGCCTACACCACCGACGATCTCGGCCAAGTAGCT GCCGAACTGAAAGAAGCGACCGCAGAGCTAAAAAAGCCGTCGGGGGTGCCCGCATCCTCGCATGGCGCGAAAGCCGCAGC GCCCAAAAGCAACTCGAAAAAGTCAGGTTAA
Upstream 100 bases:
>100_bases CCATCGGCGCGCAGCCAGCTTAATCGATAAGTAAGCAAGCCTAGGCACCTAATCAGTGCCTAGCTATCAACTCCACCGAA CACCAAAGCAGGACATTGCC
Downstream 100 bases:
>100_bases CAGGCAACGCAGAGCACGCGCCGAGTCTGCATTTACAGCTAATAGAGCTCGGTGCAGACCTAAAGCGGCTCAAAGCCTTT GAACGACGGGCCGACAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSAIADFKKRLEAAKRAKSPAATETTATPAPENEALHLLAYLLGCDVDSAIEQGRNAAEEKAKYSIGIDLAKDADKTAIA TVTTDEQGNIASIIDHAAELEDSAATVTDAAETALDAADKVSESADKVSSAAGDLESAASSVDDSASNLAYTTDDLGQVA AELKEATAELKKPSGVPASSHGAKAAAPKSNSKKSG
Sequences:
>Translated_196_residues MSAIADFKKRLEAAKRAKSPAATETTATPAPENEALHLLAYLLGCDVDSAIEQGRNAAEEKAKYSIGIDLAKDADKTAIA TVTTDEQGNIASIIDHAAELEDSAATVTDAAETALDAADKVSESADKVSSAAGDLESAASSVDDSASNLAYTTDDLGQVA AELKEATAELKKPSGVPASSHGAKAAAPKSNSKKSG >Mature_195_residues SAIADFKKRLEAAKRAKSPAATETTATPAPENEALHLLAYLLGCDVDSAIEQGRNAAEEKAKYSIGIDLAKDADKTAIAT VTTDEQGNIASIIDHAAELEDSAATVTDAAETALDAADKVSESADKVSSAAGDLESAASSVDDSASNLAYTTDDLGQVAA ELKEATAELKKPSGVPASSHGAKAAAPKSNSKKSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19862; Mature: 19730
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIADFKKRLEAAKRAKSPAATETTATPAPENEALHLLAYLLGCDVDSAIEQGRNAAEE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHH KAKYSIGIDLAKDADKTAIATVTTDEQGNIASIIDHAAELEDSAATVTDAAETALDAADK HHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSESADKVSSAAGDLESAASSVDDSASNLAYTTDDLGQVAAELKEATAELKKPSGVPASS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCC HGAKAAAPKSNSKKSG CCCCCCCCCCCCCCCC >Mature Secondary Structure SAIADFKKRLEAAKRAKSPAATETTATPAPENEALHLLAYLLGCDVDSAIEQGRNAAEE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHH KAKYSIGIDLAKDADKTAIATVTTDEQGNIASIIDHAAELEDSAATVTDAAETALDAADK HHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSESADKVSSAAGDLESAASSVDDSASNLAYTTDDLGQVAAELKEATAELKKPSGVPASS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCC HGAKAAAPKSNSKKSG CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA