| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173522
Identifier: 126173522
GI number: 126173522
Start: 1470289
End: 1471332
Strand: Direct
Name: 126173522
Synonym: Sbal_1284
Alternate gene names: NA
Gene position: 1470289-1471332 (Clockwise)
Preceding gene: 126173521
Following gene: 126173523
Centisome position: 28.68
GC content: 46.65
Gene sequence:
>1044_bases ATGAGCCAAATGCAAATTTTAAACGCCGAAGCGGCAAAGTTACTGCCTCAATACTCGGCTGGTGTGGCAAAAGCCTACGG CGTAACAGACGCTAGTAAGCAGTTCAGCGTTAGCGCGCCGATGGAAACCAAGCTGCGAGCAGCGTTACTAGAGTCTGTCG ATTTCCTCGGCATGATCACCGCATTGCAAGTAGACCAAATGCAAGGTCAAGTCGTTAACGTGGGCGATTACGGTATTGCA ACGGGCCGGAAAGTGAATGGCCGCTTTAATACCGATCAGGGCGTAGGTGGCAACAAATTTGAACTTAAAGAAACAGATTC TTGTGCATCACTAAAATGGAACCTGTTATCAACGTGGGCAAACAGCGGCAATCCAAATGAGTTTTTAAAACTCATGAAAG AAAACGCAACTAAGCGTTTCGCGTTAGACATGATCCGCATCGGCTTTAACGGTAAAACTATCGCAGCTGGTGATACTGAT CCTGTCGCTAACCCGAACGGTGAAGACGTTAACAAAGGTTGGCATCAGTTAGTAAAAGAAAACGCCCCAGACCAAATCAT GGGTGAAGAAATTTACTTCAACCCAGATGCAGACGTAAACGCCTTAAAATCTCACGAATATAAAACGTTAGATGCAATCG TGACCGATTTGCGCCTCACGTTAATTCATCCATCAATGCGTAATGACCCTCGTTTAGTGGTGTTAGTCGGCAGCGACCTA GTTGCCGCAGCACAAATTAAGATGATGAACCTTGCCGATAAGCCATCTGAAAAAGTGGCCGCTCAGCAAATGGATAAATC AATCGGTGGTTTGCGCGCCTACACACCACCGTTCTTCCCTGGTAAACGCATTGTCGTTACGCCGTTATCAAACATGCACC TTTACACCCAGAAAAATACCTCATCACGTAAGTCTGAAAACAGCGAAGACCGCAAGCAGCATGAGGACAAATACTGGCGC AACGAAGGTTATGCGATTGAAGAGTATGAAGCCTATGCCGCAGTCGATGAAGATTTAATGACCATCGGCGCGCAGCCAGC TTAA
Upstream 100 bases:
>100_bases AACCAAGAGCCAAACCCAACAGGTACTGGCGAAAGCATTAGCTTTATCTAACTTGGCGCGAAATTAACGCCTTAACGAAT TTTAGAACGGGAAAAGAACC
Downstream 100 bases:
>100_bases TCGATAAGTAAGCAAGCCTAGGCACCTAATCAGTGCCTAGCTATCAACTCCACCGAACACCAAAGCAGGACATTGCCATG AGTGCCATCGCCGATTTTAA
Product: P2 family phage major capsid protein
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Tail Tube Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSQMQILNAEAAKLLPQYSAGVAKAYGVTDASKQFSVSAPMETKLRAALLESVDFLGMITALQVDQMQGQVVNVGDYGIA TGRKVNGRFNTDQGVGGNKFELKETDSCASLKWNLLSTWANSGNPNEFLKLMKENATKRFALDMIRIGFNGKTIAAGDTD PVANPNGEDVNKGWHQLVKENAPDQIMGEEIYFNPDADVNALKSHEYKTLDAIVTDLRLTLIHPSMRNDPRLVVLVGSDL VAAAQIKMMNLADKPSEKVAAQQMDKSIGGLRAYTPPFFPGKRIVVTPLSNMHLYTQKNTSSRKSENSEDRKQHEDKYWR NEGYAIEEYEAYAAVDEDLMTIGAQPA
Sequences:
>Translated_347_residues MSQMQILNAEAAKLLPQYSAGVAKAYGVTDASKQFSVSAPMETKLRAALLESVDFLGMITALQVDQMQGQVVNVGDYGIA TGRKVNGRFNTDQGVGGNKFELKETDSCASLKWNLLSTWANSGNPNEFLKLMKENATKRFALDMIRIGFNGKTIAAGDTD PVANPNGEDVNKGWHQLVKENAPDQIMGEEIYFNPDADVNALKSHEYKTLDAIVTDLRLTLIHPSMRNDPRLVVLVGSDL VAAAQIKMMNLADKPSEKVAAQQMDKSIGGLRAYTPPFFPGKRIVVTPLSNMHLYTQKNTSSRKSENSEDRKQHEDKYWR NEGYAIEEYEAYAAVDEDLMTIGAQPA >Mature_346_residues SQMQILNAEAAKLLPQYSAGVAKAYGVTDASKQFSVSAPMETKLRAALLESVDFLGMITALQVDQMQGQVVNVGDYGIAT GRKVNGRFNTDQGVGGNKFELKETDSCASLKWNLLSTWANSGNPNEFLKLMKENATKRFALDMIRIGFNGKTIAAGDTDP VANPNGEDVNKGWHQLVKENAPDQIMGEEIYFNPDADVNALKSHEYKTLDAIVTDLRLTLIHPSMRNDPRLVVLVGSDLV AAAQIKMMNLADKPSEKVAAQQMDKSIGGLRAYTPPFFPGKRIVVTPLSNMHLYTQKNTSSRKSENSEDRKQHEDKYWRN EGYAIEEYEAYAAVDEDLMTIGAQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38257; Mature: 38126
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMQILNAEAAKLLPQYSAGVAKAYGVTDASKQFSVSAPMETKLRAALLESVDFLGMIT CCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH ALQVDQMQGQVVNVGDYGIATGRKVNGRFNTDQGVGGNKFELKETDSCASLKWNLLSTWA HHHHHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC NSGNPNEFLKLMKENATKRFALDMIRIGFNGKTIAAGDTDPVANPNGEDVNKGWHQLVKE CCCCHHHHHHHHHHCCHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHC NAPDQIMGEEIYFNPDADVNALKSHEYKTLDAIVTDLRLTLIHPSMRNDPRLVVLVGSDL CCCCHHCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCC VAAAQIKMMNLADKPSEKVAAQQMDKSIGGLRAYTPPFFPGKRIVVTPLSNMHLYTQKNT CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCC SSRKSENSEDRKQHEDKYWRNEGYAIEEYEAYAAVDEDLMTIGAQPA CCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQMQILNAEAAKLLPQYSAGVAKAYGVTDASKQFSVSAPMETKLRAALLESVDFLGMIT CCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH ALQVDQMQGQVVNVGDYGIATGRKVNGRFNTDQGVGGNKFELKETDSCASLKWNLLSTWA HHHHHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHC NSGNPNEFLKLMKENATKRFALDMIRIGFNGKTIAAGDTDPVANPNGEDVNKGWHQLVKE CCCCHHHHHHHHHHCCHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHC NAPDQIMGEEIYFNPDADVNALKSHEYKTLDAIVTDLRLTLIHPSMRNDPRLVVLVGSDL CCCCHHCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCC VAAAQIKMMNLADKPSEKVAAQQMDKSIGGLRAYTPPFFPGKRIVVTPLSNMHLYTQKNT CHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCC SSRKSENSEDRKQHEDKYWRNEGYAIEEYEAYAAVDEDLMTIGAQPA CCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA