Click here to switch to the map view.

The map label for this gene is 126173499

Identifier: 126173499

GI number: 126173499

Start: 1452105

End: 1452545

Strand: Direct

Name: 126173499

Synonym: Sbal_1261

Alternate gene names: NA

Gene position: 1452105-1452545 (Clockwise)

Preceding gene: 126173498

Following gene: 126173504

Centisome position: 28.32

GC content: 41.95

Gene sequence:

>441_bases
ATGTATCACTATACAGAGTGCGGTTTATCAAACGTTTTCTTGAAAAACGGCGTTGTCGTCGAAGAAATCGATGGCGAAGA
ATACACCAGCATAAATGACATGAACGGCTTACATAAAGCAATTGCACAAGCTGTTGTAGATAGCCCGTTCCCACTAAAAA
GCGAAGAGTTTAAGTTTCTTCGTCTTGAAATGAATTTATCGCAAAAAGCATTAGCGGTACGTTTTGGCGTATCAGAGCAA
ACAATCGCGCGTTATGAAAAGGGGCAAACAGAAATCCCGCGCACTACCGATGTTGCTTTACGCACCTTGTACATGGAAAA
AATCGAGCATAACAATCCTGTAAGTTACTTTCTTGAGTTGCTGGCCGATGCCGAAGCAAAAGAGACAAGAGATAAAATCT
TACTCGAAGAAAATCACCAGCACTGGGAAGTCACAGCGTAA

Upstream 100 bases:

>100_bases
TCTGCACTCGTGACAGTTTGGGTTATTTAAGAAAACATCATGCATCACGATACAGCTAAGAAGCTCGCCAATCGGCAGGG
CGAAAGCTAAGGAAAACATC

Downstream 100 bases:

>100_bases
GTGATAGATAATTCCATAAAGGCACCTTAAGGTGCCTTTTTTCTTATAGCAAGAAAACGCTACCATTGAGTCAGCCACGC
GCATATCGAGTTTCCAAGTG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Hypothethical Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MYHYTECGLSNVFLKNGVVVEEIDGEEYTSINDMNGLHKAIAQAVVDSPFPLKSEEFKFLRLEMNLSQKALAVRFGVSEQ
TIARYEKGQTEIPRTTDVALRTLYMEKIEHNNPVSYFLELLADAEAKETRDKILLEENHQHWEVTA

Sequences:

>Translated_146_residues
MYHYTECGLSNVFLKNGVVVEEIDGEEYTSINDMNGLHKAIAQAVVDSPFPLKSEEFKFLRLEMNLSQKALAVRFGVSEQ
TIARYEKGQTEIPRTTDVALRTLYMEKIEHNNPVSYFLELLADAEAKETRDKILLEENHQHWEVTA
>Mature_146_residues
MYHYTECGLSNVFLKNGVVVEEIDGEEYTSINDMNGLHKAIAQAVVDSPFPLKSEEFKFLRLEMNLSQKALAVRFGVSEQ
TIARYEKGQTEIPRTTDVALRTLYMEKIEHNNPVSYFLELLADAEAKETRDKILLEENHQHWEVTA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16780; Mature: 16780

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHYTECGLSNVFLKNGVVVEEIDGEEYTSINDMNGLHKAIAQAVVDSPFPLKSEEFKFL
CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
RLEMNLSQKALAVRFGVSEQTIARYEKGQTEIPRTTDVALRTLYMEKIEHNNPVSYFLEL
EEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LADAEAKETRDKILLEENHQHWEVTA
HHCCCHHHHHHHEEEECCCCEEEECC
>Mature Secondary Structure
MYHYTECGLSNVFLKNGVVVEEIDGEEYTSINDMNGLHKAIAQAVVDSPFPLKSEEFKFL
CCCCCCCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
RLEMNLSQKALAVRFGVSEQTIARYEKGQTEIPRTTDVALRTLYMEKIEHNNPVSYFLEL
EEEECCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LADAEAKETRDKILLEENHQHWEVTA
HHCCCHHHHHHHEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA