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The map label for this gene is ycbZ [H]

Identifier: 126173488

GI number: 126173488

Start: 1436916

End: 1439333

Strand: Reverse

Name: ycbZ [H]

Synonym: Sbal_1250

Alternate gene names: 126173488

Gene position: 1439333-1436916 (Counterclockwise)

Preceding gene: 126173500

Following gene: 126173486

Centisome position: 28.07

GC content: 48.47

Gene sequence:

>2418_bases
ATGCCCACTGACGTCGTATCAAGCCAAGCCACCCTACTCGACAGTAAACAACTGTATCGCATTTGCGAACTCGACCAATT
AAGCACAGATTGCCAGTCTACAGCCGAGCTCACTCCACTTGATGATATTGTCGGCCAAGAACGTGCCCAGCAAGCGGTAG
AGTTTGCGATGGGGATTAAAGAAAAGGGTTATAACATCTACGCCATCGGCCAGAACGGCCTTGGCAAACGCACTATGATG
CTGCGCTATTTAAGCCGTCACGAGCCAAGCGATCATACGCTGTACGACTGGTGTTACGTGGTTAATTTCGATGATACCCG
TTGCCCTAAAGTGCTCAAACTGAGCGCGGGGACTGGGCTTGAATTTAAAAAAGCCGTCGAAAAATTAATGCTAAAACTTG
TCAAAGCTATGCCTTTAGCCTTTGATAATGAAATGTATTATGCCCGCACCGAAAAGCTCAAAAGCCAGCTATCACAGAAA
CAAGAAGTCGCACTCACAGAATTAACCGAAGAAGCAAAACAAAAAGGCATCAGCCTCAGCTTGACTATGCAGGGCGACTA
TCAAATGTTAGCCCTCAATGGTGAGGAGCCCCACGACGAAGCCTCATTCGAAGCCTTGACCGATGCTGAACGCAGCCAAT
TTGAGAGTAATATCAACGGCCTAGAAGTGAAACTGCGCGGTATTATTCGCCAAATCACAGAATGGGAAGAAGAATTTAGC
GACAAGCAGCAAGAGCATGACGAGCAAGTCGCCAAAGAAGTGTTAATCCATTTTATTAAGCCACTTAAAGATAAGTTCAA
GCACCAGCCAGAAACGCGCACTTTCTTAACCGGTATGCAGGCGGATATCTTAGATAATCTGGATATTTTCTTAGAAGAAA
GCGAAGAACAATTGGGCCTAGCCTACGCTTCCCTAGAAAAGAAAATGCCCCGTCGCTACCAAGTTAACGTTTTGGTCGGC
CAAGGCACTCAAAAATTCCCCATAGTCGTCGAAGAAAGCCCGAGTTATCACAGCCTATTTGGCTATGTGGAGAACGCCAC
ATTTAGAGGCACAGTGTTCACCGACTTCTCGCTTATCCGTCCCGGCAGCCTGCACAAGGCGAATGGCGGCGTGTTATTGA
TGGATGCCGTTAAAGTATTAGAGCGCCCTTACGTGTGGGACGGACTAAAGCGCGCCCTGCGTTCACGCAAACTGGATTTA
AGCTCACTCGAACGGGAAGTGTCTCTATCGGGCACGATTTCCTTGGCGCCTGAGCCTATCCCCTTAGATGTGAAAATTAT
TCTTTTTGGCGATCATGAAACCTATCAGCTGTTACAGCACTATGATCCTGATTTTAGTGAGTTATTTCGCGTTACCGCCG
ATTTTGAAGATGTGATGGACAGAACCTCTGCTTCTGAGGCGCACTATGCCCGCTTTATTTCGAGCATAGTCCACGACAAC
AACATGCTGCACTGCGATCGCGCCGCCATTGCGCGCATCATCGAATACAGCTCGCGGGAAGCCGAAGATCAGCAAAAACT
GTCGCTACACTCGGCCAATATTGCCAACCTGCTGCGGGAATCAAACTACTGCGCTAAATCGGCGGCCAGTCAGCAAATTT
TAGTGCCGCACGTTGAGCAAGCACTGCGAAATCAAGAGCAAAGAGTCTCGCGTCTGCACGATAACATAATGCAGAGCTTT
ACCAACGGCACCACCTTGATCAGCACTCAAGGCAAAGTGATGGGACAAATCAATGCCTTATCCGTCATTTCGACCTCAGA
TCATCAGTTTGGTATGCCCAATCGCATCACAGCAACCACAGCCTTTGGTAAGGGTGAAGTGATGGATATCGAACACAGAG
TCAAACTAGGGGGGCGAATTCACTCTAAGGGCGTGTTGATCTTAACCGCTTATTTAGCCTCAGTGTTAGGTAAAACAGCG
CAAATCCCGCTCACCACTTACCTCACCTTCGAGCAATCTTACAGCGGCGTGGACGGCGATAGCGCCTCAATGGCCGAATG
TTGCGCCATTATCTCGGCCATTAGCGAGCAAGCACTAAGGCAAGATATTGCCATCACAGGTTCGATGAACCAGTTTGGTG
AGGCCCAGCCCATTGGCGGCGTGAATGAGAAAATTGAAGGCTTCTTTGATGTCTGCAAAATTAAAGGCCGTACGTCAGAT
CAAGGGGTGATTATTCCTGCTTCGAACATGGCTAACCTTATGCTACGTAAAGACATTGTCGATGCTGTAGCGCAAGGTGA
GTTCCACATTTGGGCCATTACCCATGTGACTCAAGCCATGGAGTTGCTGCTTGGTAAAACCGCAGGCAGTTTGTCGCAAA
CGGCCGCTCCTAGCCAAGGGCAATATTCTCCCGAGAGTATTTTCGGCATCGCCCAGCAAAAGCTCACCGCACTTAGATCC
TTAGTTAAAGCGGATTAA

Upstream 100 bases:

>100_bases
CCCTAAAGGCATAAATCAGCAATAACAGAGTTTTGATTGACAAAAATGCTATCTTATTGTCTACAATGGAAATAATAAGG
CTGAAAAAACAAGGATATTT

Downstream 100 bases:

>100_bases
ATAAAAACGCGAAAAAGACACACAAAAAGGGTTAGCCAATGCTAACCCTTTCTTTATTCAGCTATTAAGTGAAATTACAC
TAAGCTTGCTAGCATTTCGT

Product: peptidase S16, lon domain-containing protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 805; Mature: 804

Protein sequence:

>805_residues
MPTDVVSSQATLLDSKQLYRICELDQLSTDCQSTAELTPLDDIVGQERAQQAVEFAMGIKEKGYNIYAIGQNGLGKRTMM
LRYLSRHEPSDHTLYDWCYVVNFDDTRCPKVLKLSAGTGLEFKKAVEKLMLKLVKAMPLAFDNEMYYARTEKLKSQLSQK
QEVALTELTEEAKQKGISLSLTMQGDYQMLALNGEEPHDEASFEALTDAERSQFESNINGLEVKLRGIIRQITEWEEEFS
DKQQEHDEQVAKEVLIHFIKPLKDKFKHQPETRTFLTGMQADILDNLDIFLEESEEQLGLAYASLEKKMPRRYQVNVLVG
QGTQKFPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIRPGSLHKANGGVLLMDAVKVLERPYVWDGLKRALRSRKLDL
SSLEREVSLSGTISLAPEPIPLDVKIILFGDHETYQLLQHYDPDFSELFRVTADFEDVMDRTSASEAHYARFISSIVHDN
NMLHCDRAAIARIIEYSSREAEDQQKLSLHSANIANLLRESNYCAKSAASQQILVPHVEQALRNQEQRVSRLHDNIMQSF
TNGTTLISTQGKVMGQINALSVISTSDHQFGMPNRITATTAFGKGEVMDIEHRVKLGGRIHSKGVLILTAYLASVLGKTA
QIPLTTYLTFEQSYSGVDGDSASMAECCAIISAISEQALRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRTSD
QGVIIPASNMANLMLRKDIVDAVAQGEFHIWAITHVTQAMELLLGKTAGSLSQTAAPSQGQYSPESIFGIAQQKLTALRS
LVKAD

Sequences:

>Translated_805_residues
MPTDVVSSQATLLDSKQLYRICELDQLSTDCQSTAELTPLDDIVGQERAQQAVEFAMGIKEKGYNIYAIGQNGLGKRTMM
LRYLSRHEPSDHTLYDWCYVVNFDDTRCPKVLKLSAGTGLEFKKAVEKLMLKLVKAMPLAFDNEMYYARTEKLKSQLSQK
QEVALTELTEEAKQKGISLSLTMQGDYQMLALNGEEPHDEASFEALTDAERSQFESNINGLEVKLRGIIRQITEWEEEFS
DKQQEHDEQVAKEVLIHFIKPLKDKFKHQPETRTFLTGMQADILDNLDIFLEESEEQLGLAYASLEKKMPRRYQVNVLVG
QGTQKFPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIRPGSLHKANGGVLLMDAVKVLERPYVWDGLKRALRSRKLDL
SSLEREVSLSGTISLAPEPIPLDVKIILFGDHETYQLLQHYDPDFSELFRVTADFEDVMDRTSASEAHYARFISSIVHDN
NMLHCDRAAIARIIEYSSREAEDQQKLSLHSANIANLLRESNYCAKSAASQQILVPHVEQALRNQEQRVSRLHDNIMQSF
TNGTTLISTQGKVMGQINALSVISTSDHQFGMPNRITATTAFGKGEVMDIEHRVKLGGRIHSKGVLILTAYLASVLGKTA
QIPLTTYLTFEQSYSGVDGDSASMAECCAIISAISEQALRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRTSD
QGVIIPASNMANLMLRKDIVDAVAQGEFHIWAITHVTQAMELLLGKTAGSLSQTAAPSQGQYSPESIFGIAQQKLTALRS
LVKAD
>Mature_804_residues
PTDVVSSQATLLDSKQLYRICELDQLSTDCQSTAELTPLDDIVGQERAQQAVEFAMGIKEKGYNIYAIGQNGLGKRTMML
RYLSRHEPSDHTLYDWCYVVNFDDTRCPKVLKLSAGTGLEFKKAVEKLMLKLVKAMPLAFDNEMYYARTEKLKSQLSQKQ
EVALTELTEEAKQKGISLSLTMQGDYQMLALNGEEPHDEASFEALTDAERSQFESNINGLEVKLRGIIRQITEWEEEFSD
KQQEHDEQVAKEVLIHFIKPLKDKFKHQPETRTFLTGMQADILDNLDIFLEESEEQLGLAYASLEKKMPRRYQVNVLVGQ
GTQKFPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIRPGSLHKANGGVLLMDAVKVLERPYVWDGLKRALRSRKLDLS
SLEREVSLSGTISLAPEPIPLDVKIILFGDHETYQLLQHYDPDFSELFRVTADFEDVMDRTSASEAHYARFISSIVHDNN
MLHCDRAAIARIIEYSSREAEDQQKLSLHSANIANLLRESNYCAKSAASQQILVPHVEQALRNQEQRVSRLHDNIMQSFT
NGTTLISTQGKVMGQINALSVISTSDHQFGMPNRITATTAFGKGEVMDIEHRVKLGGRIHSKGVLILTAYLASVLGKTAQ
IPLTTYLTFEQSYSGVDGDSASMAECCAIISAISEQALRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRTSDQ
GVIIPASNMANLMLRKDIVDAVAQGEFHIWAITHVTQAMELLLGKTAGSLSQTAAPSQGQYSPESIFGIAQQKLTALRSL
VKAD

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=440, Percent_Identity=37.9545454545455, Blast_Score=284, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89811; Mature: 89680

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDVVSSQATLLDSKQLYRICELDQLSTDCQSTAELTPLDDIVGQERAQQAVEFAMGIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
EKGYNIYAIGQNGLGKRTMMLRYLSRHEPSDHTLYDWCYVVNFDDTRCPKVLKLSAGTGL
HCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCC
EFKKAVEKLMLKLVKAMPLAFDNEMYYARTEKLKSQLSQKQEVALTELTEEAKQKGISLS
HHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LTMQGDYQMLALNGEEPHDEASFEALTDAERSQFESNINGLEVKLRGIIRQITEWEEEFS
EEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DKQQEHDEQVAKEVLIHFIKPLKDKFKHQPETRTFLTGMQADILDNLDIFLEESEEQLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCHHEEECCHHHHHH
AYASLEKKMPRRYQVNVLVGQGTQKFPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIR
HHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCEEEEEEEECCEEEC
PGSLHKANGGVLLMDAVKVLERPYVWDGLKRALRSRKLDLSSLEREVSLSGTISLAPEPI
CCCCEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCC
PLDVKIILFGDHETYQLLQHYDPDFSELFRVTADFEDVMDRTSASEAHYARFISSIVHDN
CCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCC
NMLHCDRAAIARIIEYSSREAEDQQKLSLHSANIANLLRESNYCAKSAASQQILVPHVEQ
CCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHH
ALRNQEQRVSRLHDNIMQSFTNGTTLISTQGKVMGQINALSVISTSDHQFGMPNRITATT
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCEEEEEEEECCCCCCCCCCCEEEEE
AFGKGEVMDIEHRVKLGGRIHSKGVLILTAYLASVLGKTAQIPLTTYLTFEQSYSGVDGD
ECCCCCEEEHHHHHHHCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC
SASMAECCAIISAISEQALRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRTSD
CHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QGVIIPASNMANLMLRKDIVDAVAQGEFHIWAITHVTQAMELLLGKTAGSLSQTAAPSQG
CCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCHHCCCCCCC
QYSPESIFGIAQQKLTALRSLVKAD
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTDVVSSQATLLDSKQLYRICELDQLSTDCQSTAELTPLDDIVGQERAQQAVEFAMGIK
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
EKGYNIYAIGQNGLGKRTMMLRYLSRHEPSDHTLYDWCYVVNFDDTRCPKVLKLSAGTGL
HCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCC
EFKKAVEKLMLKLVKAMPLAFDNEMYYARTEKLKSQLSQKQEVALTELTEEAKQKGISLS
HHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LTMQGDYQMLALNGEEPHDEASFEALTDAERSQFESNINGLEVKLRGIIRQITEWEEEFS
EEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DKQQEHDEQVAKEVLIHFIKPLKDKFKHQPETRTFLTGMQADILDNLDIFLEESEEQLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCHHEEECCHHHHHH
AYASLEKKMPRRYQVNVLVGQGTQKFPIVVEESPSYHSLFGYVENATFRGTVFTDFSLIR
HHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCEEEEEEEECCEEEC
PGSLHKANGGVLLMDAVKVLERPYVWDGLKRALRSRKLDLSSLEREVSLSGTISLAPEPI
CCCCEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCC
PLDVKIILFGDHETYQLLQHYDPDFSELFRVTADFEDVMDRTSASEAHYARFISSIVHDN
CCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCC
NMLHCDRAAIARIIEYSSREAEDQQKLSLHSANIANLLRESNYCAKSAASQQILVPHVEQ
CCEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEHHHHHH
ALRNQEQRVSRLHDNIMQSFTNGTTLISTQGKVMGQINALSVISTSDHQFGMPNRITATT
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCEEEEEEEECCCCCCCCCCCEEEEE
AFGKGEVMDIEHRVKLGGRIHSKGVLILTAYLASVLGKTAQIPLTTYLTFEQSYSGVDGD
ECCCCCEEEHHHHHHHCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC
SASMAECCAIISAISEQALRQDIAITGSMNQFGEAQPIGGVNEKIEGFFDVCKIKGRTSD
CHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QGVIIPASNMANLMLRKDIVDAVAQGEFHIWAITHVTQAMELLLGKTAGSLSQTAAPSQG
CCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCHHCCCCCCC
QYSPESIFGIAQQKLTALRSLVKAD
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]