| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173401
Identifier: 126173401
GI number: 126173401
Start: 1342318
End: 1343121
Strand: Direct
Name: 126173401
Synonym: Sbal_1162
Alternate gene names: NA
Gene position: 1342318-1343121 (Clockwise)
Preceding gene: 126173396
Following gene: 126173402
Centisome position: 26.18
GC content: 44.78
Gene sequence:
>804_bases ATGCCAAATTATCATCGTTGGCTAGATCGGCTGCAAGTGATGGATCTCAAGTATCGTCCATCTTCAGTGTATTTATCGCT TTTAGTGTTAGTTTCTATTCTTTTTGGGGCTTGGATAAGTTTTCTGCTACTAAGCAGTGATGAGCCCGTGGTTAAACACA TCAGCAGCAAAGCCCAACGCTTGAGTGCTGAATTAGAAACACAGACCCAATTACTAGCGACCCGAAATCTAGAGCTGTCC GTCGAGCGTGAGGCTAACGCCCAAATGCAAGATATGTTTGGCCAGCAGATGAAAAAGCAAAAAGAATTGGAACATGAGCT GGCGTTTTACCGTAGCATTATGACACCGGATGATAATGCCGAAGGTGTCGCCATCCACGGACTTGAAATGACGCCGGGCG TTTTAGCCGATGAGTACAATCTCAAACTGGTATTAACTCAGCTGCAAAAGCGCAAGCAGGCGATTCAAGGTCGAGTCGAA TTGACATTAATTGGCGTGCAGGAGGGCAAATCCGTTAGCTTGAGTGTGAACAAACTCACGGGCTCTAAGTTGGAATTTGA TTTTCGCTATTTTCAGGTCATAGATACCAAGGTCACTGTTCCTGCTGGCTTTAGTTTACAGCAAGTGAAAGTAAAAGTGC TGGTGCCTTCGAGCCGCTGGACCAAGAATTCGCAGACAGAACATGTCTATAGTGCCCCTGAGTTATTACAGGGTGAAAAA GAACCACGGGTAATACTTGAACAAAACAGTCAGGTAAAGGATAATTTGCCCCAGAAAACTGATGTAAGAGGTAGTAATGA CTGA
Upstream 100 bases:
>100_bases GCGACTTTATTTATCGTTAATTGCACTGCATTGGCCTGAGTTGTATTGTATCGAACTCGTTCTTGAGTTGATTGTATTTT ATATAAGGGGCTGTTACCTA
Downstream 100 bases:
>100_bases TCAAGCTGATACAGCAATGCCAATCCAATTTACCGATGCGGCAGCCGCTAAGGTGAAAGGTTTGCTGGAAGAAGAGCAAA ATCCTGCACTTAAGCTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPNYHRWLDRLQVMDLKYRPSSVYLSLLVLVSILFGAWISFLLLSSDEPVVKHISSKAQRLSAELETQTQLLATRNLELS VEREANAQMQDMFGQQMKKQKELEHELAFYRSIMTPDDNAEGVAIHGLEMTPGVLADEYNLKLVLTQLQKRKQAIQGRVE LTLIGVQEGKSVSLSVNKLTGSKLEFDFRYFQVIDTKVTVPAGFSLQQVKVKVLVPSSRWTKNSQTEHVYSAPELLQGEK EPRVILEQNSQVKDNLPQKTDVRGSND
Sequences:
>Translated_267_residues MPNYHRWLDRLQVMDLKYRPSSVYLSLLVLVSILFGAWISFLLLSSDEPVVKHISSKAQRLSAELETQTQLLATRNLELS VEREANAQMQDMFGQQMKKQKELEHELAFYRSIMTPDDNAEGVAIHGLEMTPGVLADEYNLKLVLTQLQKRKQAIQGRVE LTLIGVQEGKSVSLSVNKLTGSKLEFDFRYFQVIDTKVTVPAGFSLQQVKVKVLVPSSRWTKNSQTEHVYSAPELLQGEK EPRVILEQNSQVKDNLPQKTDVRGSND >Mature_266_residues PNYHRWLDRLQVMDLKYRPSSVYLSLLVLVSILFGAWISFLLLSSDEPVVKHISSKAQRLSAELETQTQLLATRNLELSV EREANAQMQDMFGQQMKKQKELEHELAFYRSIMTPDDNAEGVAIHGLEMTPGVLADEYNLKLVLTQLQKRKQAIQGRVEL TLIGVQEGKSVSLSVNKLTGSKLEFDFRYFQVIDTKVTVPAGFSLQQVKVKVLVPSSRWTKNSQTEHVYSAPELLQGEKE PRVILEQNSQVKDNLPQKTDVRGSND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30357; Mature: 30226
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYHRWLDRLQVMDLKYRPSSVYLSLLVLVSILFGAWISFLLLSSDEPVVKHISSKAQR CCCHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LSAELETQTQLLATRNLELSVEREANAQMQDMFGQQMKKQKELEHELAFYRSIMTPDDNA HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EGVAIHGLEMTPGVLADEYNLKLVLTQLQKRKQAIQGRVELTLIGVQEGKSVSLSVNKLT CEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEECC GSKLEFDFRYFQVIDTKVTVPAGFSLQQVKVKVLVPSSRWTKNSQTEHVYSAPELLQGEK CCEEEEEEEEEEEEECEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHCCCHHHHCCCC EPRVILEQNSQVKDNLPQKTDVRGSND CCCEEEECCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure PNYHRWLDRLQVMDLKYRPSSVYLSLLVLVSILFGAWISFLLLSSDEPVVKHISSKAQR CCHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LSAELETQTQLLATRNLELSVEREANAQMQDMFGQQMKKQKELEHELAFYRSIMTPDDNA HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EGVAIHGLEMTPGVLADEYNLKLVLTQLQKRKQAIQGRVELTLIGVQEGKSVSLSVNKLT CEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEECC GSKLEFDFRYFQVIDTKVTVPAGFSLQQVKVKVLVPSSRWTKNSQTEHVYSAPELLQGEK CCEEEEEEEEEEEEECEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHCCCHHHHCCCC EPRVILEQNSQVKDNLPQKTDVRGSND CCCEEEECCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA