| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is gluP [H]
Identifier: 126173372
GI number: 126173372
Start: 1304221
End: 1305516
Strand: Direct
Name: gluP [H]
Synonym: Sbal_1132
Alternate gene names: 126173372
Gene position: 1304221-1305516 (Clockwise)
Preceding gene: 126173368
Following gene: 126173373
Centisome position: 25.44
GC content: 46.45
Gene sequence:
>1296_bases ATGGCTATTGCAAATGAAACTGAGGCGAGTTCGGTGAGTGAGGCAGCAACGAGTGTGCACCAGAGTGGCAACTTTAGGTT CGCTTTAGTGGCATTAACATCGTTGTTTTTCATGTGGGGATTCATTACTTGTCTTAACGATATCTTAATACCTTATTTAA AAAACATGTTTGAGCTGAATTACGCCCAAGCCATGTTGGTGCAGTTTTGTTTTTTTGGGGCTTACTTTATTGTCTCAATC CCAGCGGGTGCACTTGTGGGTAAGATTGGTTATCAAAAAGGCATAGTCACTGGGCTTGGTATTGCGTGTTTAGGCTGCTT ATTATTTTATCCTTCAGCGAGTTTCGCTTCGTATTGGATGTTCCTAGGCGCTTTTTTTGTTTTAGCCTCTGGCATTACCA TTCTGCAAGTGGCGGCTAATCCCTACGTCAGCGTGCTGGGACCTGCAAAAACCGCGTCATCAAGACTCACTCTGACCCAA GCGTTTAATTCCTTTGGCACCACTGTTGCCCCGTTTTTTGGTAGTTGGTTGATTTTATCGACTTCACATCAAATGACGGG AGAGGCTGCTCCTGACCTTGTGGTCAGCGCTGCGGCTCAAGTGAGCACAGTACAAGTTCCCTATTTGATTTTAGCGGGCA GTTTATTTGTACTGGCGGTGATTTTTATACTGTTAAAGCTGCCTTTTTTAGGTCAAAAACTGCCGGCGAGCAGTGCTAAA GTGCTGGGCAGTGCATGGCAATTTCCGCATCTTGTTCTCGGTAGCGTGGGGATTTTTGTGTATGTGGGGGCCGAAGTCGC CATTGGCAGTTTTTTGATTAGCTTTTTAGTTCAGCCCGATATTGGCGGTTACACTCACGCCGAAGCCGCACATTACATTG CCTACTATTTCGGCGGCGCTATGGTTGGGCGTTTTATTGGCGCGGCCGTGATGCAAAAAATCAAGGCCGGCAAAGTGTTA GCCTTTAATGCGATTTGTGCTTGCTTGCTGGTGGCCTTAGCCATGCTTAGTACAGGGGCGATGGCGATGTGGGCCTTACT GTTAGTCGGGTTATGTAACTCTATTATGTTCCCGACGATTTTTAGCTTGGCATTACAAGATCTTGAACAACACACCAGCC AAGGTTCTGGCATTTTATGTTTGGCGATAGTGGGCGGCGCGATTGTGCCCTTATTCCAAGGTATGTTAGCCGATCATTTT GGTATCCAATTGGCCTTTATCTTACCGCTGCTTTGTTATGGTTTTATCGCCTATTACGGCGCCAAGGGCTGTGATGCCCC AAGACCAAGATTTTAA
Upstream 100 bases:
>100_bases AAAAGGTCAATATGTGATTTGGATAAATTAATCACGCCATTTTGACTAAGAAGATTAAACGTTTTTATCTAGATAATCGG TTGGGGAGAATAGGGCAAAC
Downstream 100 bases:
>100_bases ATTAATTAAAACACGACGATTAAACACATGGATGCGCACACGGCGTGTGTATTAAGACATTTTATTTTTGAGGGCGAGAA TTATGAGCGTTATCGCATTG
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAIANETEASSVSEAATSVHQSGNFRFALVALTSLFFMWGFITCLNDILIPYLKNMFELNYAQAMLVQFCFFGAYFIVSI PAGALVGKIGYQKGIVTGLGIACLGCLLFYPSASFASYWMFLGAFFVLASGITILQVAANPYVSVLGPAKTASSRLTLTQ AFNSFGTTVAPFFGSWLILSTSHQMTGEAAPDLVVSAAAQVSTVQVPYLILAGSLFVLAVIFILLKLPFLGQKLPASSAK VLGSAWQFPHLVLGSVGIFVYVGAEVAIGSFLISFLVQPDIGGYTHAEAAHYIAYYFGGAMVGRFIGAAVMQKIKAGKVL AFNAICACLLVALAMLSTGAMAMWALLLVGLCNSIMFPTIFSLALQDLEQHTSQGSGILCLAIVGGAIVPLFQGMLADHF GIQLAFILPLLCYGFIAYYGAKGCDAPRPRF
Sequences:
>Translated_431_residues MAIANETEASSVSEAATSVHQSGNFRFALVALTSLFFMWGFITCLNDILIPYLKNMFELNYAQAMLVQFCFFGAYFIVSI PAGALVGKIGYQKGIVTGLGIACLGCLLFYPSASFASYWMFLGAFFVLASGITILQVAANPYVSVLGPAKTASSRLTLTQ AFNSFGTTVAPFFGSWLILSTSHQMTGEAAPDLVVSAAAQVSTVQVPYLILAGSLFVLAVIFILLKLPFLGQKLPASSAK VLGSAWQFPHLVLGSVGIFVYVGAEVAIGSFLISFLVQPDIGGYTHAEAAHYIAYYFGGAMVGRFIGAAVMQKIKAGKVL AFNAICACLLVALAMLSTGAMAMWALLLVGLCNSIMFPTIFSLALQDLEQHTSQGSGILCLAIVGGAIVPLFQGMLADHF GIQLAFILPLLCYGFIAYYGAKGCDAPRPRF >Mature_430_residues AIANETEASSVSEAATSVHQSGNFRFALVALTSLFFMWGFITCLNDILIPYLKNMFELNYAQAMLVQFCFFGAYFIVSIP AGALVGKIGYQKGIVTGLGIACLGCLLFYPSASFASYWMFLGAFFVLASGITILQVAANPYVSVLGPAKTASSRLTLTQA FNSFGTTVAPFFGSWLILSTSHQMTGEAAPDLVVSAAAQVSTVQVPYLILAGSLFVLAVIFILLKLPFLGQKLPASSAKV LGSAWQFPHLVLGSVGIFVYVGAEVAIGSFLISFLVQPDIGGYTHAEAAHYIAYYFGGAMVGRFIGAAVMQKIKAGKVLA FNAICACLLVALAMLSTGAMAMWALLLVGLCNSIMFPTIFSLALQDLEQHTSQGSGILCLAIVGGAIVPLFQGMLADHFG IQLAFILPLLCYGFIAYYGAKGCDAPRPRF
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=421, Percent_Identity=36.3420427553444, Blast_Score=227, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45710; Mature: 45578
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIANETEASSVSEAATSVHQSGNFRFALVALTSLFFMWGFITCLNDILIPYLKNMFELN CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAQAMLVQFCFFGAYFIVSIPAGALVGKIGYQKGIVTGLGIACLGCLLFYPSASFASYWM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FLGAFFVLASGITILQVAANPYVSVLGPAKTASSRLTLTQAFNSFGTTVAPFFGSWLILS HHHHHHHHHCCCCEEEECCCCCEEECCCCHHCCCHHHHHHHHHHHCCCHHHHHCCCEEEE TSHQMTGEAAPDLVVSAAAQVSTVQVPYLILAGSLFVLAVIFILLKLPFLGQKLPASSAK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VLGSAWQFPHLVLGSVGIFVYVGAEVAIGSFLISFLVQPDIGGYTHAEAAHYIAYYFGGA HHHHHHCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH MVGRFIGAAVMQKIKAGKVLAFNAICACLLVALAMLSTGAMAMWALLLVGLCNSIMFPTI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FSLALQDLEQHTSQGSGILCLAIVGGAIVPLFQGMLADHFGIQLAFILPLLCYGFIAYYG HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKGCDAPRPRF CCCCCCCCCCC >Mature Secondary Structure AIANETEASSVSEAATSVHQSGNFRFALVALTSLFFMWGFITCLNDILIPYLKNMFELN CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAQAMLVQFCFFGAYFIVSIPAGALVGKIGYQKGIVTGLGIACLGCLLFYPSASFASYWM HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FLGAFFVLASGITILQVAANPYVSVLGPAKTASSRLTLTQAFNSFGTTVAPFFGSWLILS HHHHHHHHHCCCCEEEECCCCCEEECCCCHHCCCHHHHHHHHHHHCCCHHHHHCCCEEEE TSHQMTGEAAPDLVVSAAAQVSTVQVPYLILAGSLFVLAVIFILLKLPFLGQKLPASSAK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VLGSAWQFPHLVLGSVGIFVYVGAEVAIGSFLISFLVQPDIGGYTHAEAAHYIAYYFGGA HHHHHHCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH MVGRFIGAAVMQKIKAGKVLAFNAICACLLVALAMLSTGAMAMWALLLVGLCNSIMFPTI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FSLALQDLEQHTSQGSGILCLAIVGGAIVPLFQGMLADHFGIQLAFILPLLCYGFIAYYG HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AKGCDAPRPRF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]