| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173320
Identifier: 126173320
GI number: 126173320
Start: 1238090
End: 1238794
Strand: Direct
Name: 126173320
Synonym: Sbal_1077
Alternate gene names: NA
Gene position: 1238090-1238794 (Clockwise)
Preceding gene: 126173319
Following gene: 126173321
Centisome position: 24.15
GC content: 37.45
Gene sequence:
>705_bases ATGACTAATTCTATCACCCCGCTTGACTCAGCAAAACATGCGCACCTTAAAGTGACTCCTACCACTTATGAGCATGTAGC TGAGCAACATTTACTACCCATTTCAATTTATGAGTTTGCTTATGCAGCTGTAGATTCACCTGTTGTTTTTGTTAAGAATA GTGAAACAGGAGAATATCAGTCCGTAATTATGCTTGGATTAAAACCTGGACAGAATTTGAAGCAAAAAGATGGCAAATGG TTAGGGCTGTATATTCCAAATGTACTTAAAAACTATCCGTTTGGGTTAATACTGAGTGCTGAACAACAGGATAAAGTATG GGTTGGGATACGTGAAGAAAGCGCTCATGTGACTACTGACGAGGGAAATGCATTATTTGAAGGAGGAGAGGAAACGGCGT TTTTAAGATTGCGTAAAGAAAGTATTATAAAAAACTTTGAACAAGAACAAATGAGTAAGGCAATTATTGCATTTTTTGCT CAAAAAGAATTATTTTCTCCCCAAAGTCTTACCGTTGACATCAAAGGCGAAAAACGCGGCATTAATGGTATCTATTTCAT CGATGAAGCTAAGTTAAATCAACTCAGCTCAGATGAGTTCTTAGATATCAAGCAACGAGGCCTTTTAGCTCCAATTTACA GCCATTTGAACTCATTGTATCAAATTAATCGCCTAGCGAAAGAAGAAATCGAGTTGAGCGCTTAA
Upstream 100 bases:
>100_bases CTAATCTTGGTTTAACTCATGTATAAATGAAAAAGGGAGCTTGCTCCCTTTTTTTATATCTCAATAATATTCAATCAGAA GAAGCCCTCAAGGAGCTCAT
Downstream 100 bases:
>100_bases GTAATCAGCAGGCATAGGTCATGACTTCAAGAAAAGATATAAAGAGTGTCGTCATTGTGGGTGGCGGAACTGCAGGTTGG ATTTCTGCCTGTCATTTAGC
Product: SapC family protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Protein; SapC-Like Protein; SapC Related Protein; SapC Superfamily; Sapc Family Protein
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTNSITPLDSAKHAHLKVTPTTYEHVAEQHLLPISIYEFAYAAVDSPVVFVKNSETGEYQSVIMLGLKPGQNLKQKDGKW LGLYIPNVLKNYPFGLILSAEQQDKVWVGIREESAHVTTDEGNALFEGGEETAFLRLRKESIIKNFEQEQMSKAIIAFFA QKELFSPQSLTVDIKGEKRGINGIYFIDEAKLNQLSSDEFLDIKQRGLLAPIYSHLNSLYQINRLAKEEIELSA
Sequences:
>Translated_234_residues MTNSITPLDSAKHAHLKVTPTTYEHVAEQHLLPISIYEFAYAAVDSPVVFVKNSETGEYQSVIMLGLKPGQNLKQKDGKW LGLYIPNVLKNYPFGLILSAEQQDKVWVGIREESAHVTTDEGNALFEGGEETAFLRLRKESIIKNFEQEQMSKAIIAFFA QKELFSPQSLTVDIKGEKRGINGIYFIDEAKLNQLSSDEFLDIKQRGLLAPIYSHLNSLYQINRLAKEEIELSA >Mature_233_residues TNSITPLDSAKHAHLKVTPTTYEHVAEQHLLPISIYEFAYAAVDSPVVFVKNSETGEYQSVIMLGLKPGQNLKQKDGKWL GLYIPNVLKNYPFGLILSAEQQDKVWVGIREESAHVTTDEGNALFEGGEETAFLRLRKESIIKNFEQEQMSKAIIAFFAQ KELFSPQSLTVDIKGEKRGINGIYFIDEAKLNQLSSDEFLDIKQRGLLAPIYSHLNSLYQINRLAKEEIELSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26390; Mature: 26259
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSITPLDSAKHAHLKVTPTTYEHVAEQHLLPISIYEFAYAAVDSPVVFVKNSETGEYQ CCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEECCCCCCEE SVIMLGLKPGQNLKQKDGKWLGLYIPNVLKNYPFGLILSAEQQDKVWVGIREESAHVTTD EEEEEECCCCCCCHHCCCCEEEEECCHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEC EGNALFEGGEETAFLRLRKESIIKNFEQEQMSKAIIAFFAQKELFSPQSLTVDIKGEKRG CCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC INGIYFIDEAKLNQLSSDEFLDIKQRGLLAPIYSHLNSLYQINRLAKEEIELSA CCEEEEEECHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TNSITPLDSAKHAHLKVTPTTYEHVAEQHLLPISIYEFAYAAVDSPVVFVKNSETGEYQ CCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEECCCCCCEE SVIMLGLKPGQNLKQKDGKWLGLYIPNVLKNYPFGLILSAEQQDKVWVGIREESAHVTTD EEEEEECCCCCCCHHCCCCEEEEECCHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEC EGNALFEGGEETAFLRLRKESIIKNFEQEQMSKAIIAFFAQKELFSPQSLTVDIKGEKRG CCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC INGIYFIDEAKLNQLSSDEFLDIKQRGLLAPIYSHLNSLYQINRLAKEEIELSA CCEEEEEECHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA