| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173318
Identifier: 126173318
GI number: 126173318
Start: 1234996
End: 1236801
Strand: Direct
Name: 126173318
Synonym: Sbal_1075
Alternate gene names: NA
Gene position: 1234996-1236801 (Clockwise)
Preceding gene: 126173315
Following gene: 126173319
Centisome position: 24.09
GC content: 41.69
Gene sequence:
>1806_bases ATGGGATTAGACCAGAACACTGTTGCATTTGAACAAGAGCGTGAGCGTTCCGCTATTGCTGCAACATTCCAGTATGCGCC ATCTGATTCATTAAACTTTGTGTTTAACGCGATGGACATGCAAATGGCCGCGGACAACACCAACTACGCATTATGGTTTA CGCAAGCTGACACCTCATGGTCAGGAGCTCCAGGTTCTGGTGCTTGGGATAACACGGAATGGTTAGGTGGCTGCGGTTTA TGTGGTGGTGATAAGCCAGATGCATCACAGTCAGGTTCTCAAGTTGCAGGCCCTGTTAACTTAGCATATTGGCAAGCTCG CCCTCGTGAAGCGACAATGAAGTCTCAAGTTTTCGACCTGAAGATGGAATATAGCGGCGATGGATACCAGTTTACGACTC AAATCGGTGATACAAGCTCTACTGGTGGTACCGATTTTGAAATGGTTGTTGAAGATGGTCTGGGTGGCACAGCATTAAAT GGTGCGACTTACGACTTTACCAATGGTCATCAAACTTGGGATTTGAATGGTTTTGATACAGCTACTTATGATCCTGGTTC ACTTGTAATGGGTACTGGCAGTAACTTTAATAAAACACCCAAAACGGATGATGAAACTTATATTCAAGCCGATATTAAGT TTGATGTAGATCTAGGTGTGGTTAATGCCATTAAAACGGGTCTGAAATATGCGAAGCATAATACAACGAGTCGCCGTTTT GACTTTGTACAAGCCGATGACTTTAATCCCGTCATATCAACAGCAGGCTTAAATACTGGTACTTTTGCTGTAGGAACAAG TGAATACGATATTATTCGTTTTGATCCAGATGCACTAAAAGATTGGGCCAAATCGAGCATCATAGGTGAGACAGAAGATT TTGGTTCATACCGTGAAATTGACGAAGATAACTATGCTGCTTATGTGATGGCTAACTTTGCATCAGAAGGTGTACGAGGT AACTTTGGCGTGCGTTATGCGGGTACTGAAGCAACTTCAACTTACTATGTTGATGGCAAGAAAACCGATTCTTCGGCTAA TTATGGGGAATGGTTACCAAGCTTGAACGTTGCATTCGACTTAGCACCAGATCTCATATTGCGCGCATCTGCAGCTCGAG TTATGGCTCGTCCACAGTATGATGACATGTATGTTAACCCTAACGTTTTAGGTGCGAATGATGATGTGCCTAATAACCAA AAATGGGTTGTTGGCAATATCGGGTTAAAACCATTTATTGCTAATCAAATAGACTTAGGTATTGAATGGTATTTCAATGA AGAGTCATTACTTTCTGCGGCTTTGTTTATGAAGGATGTTAAAAACTTCGTAACCTTTAGCGAGTATCATGCAGATAGCG CCGATATCCCATTTACTGGCACGTTAAAGCCTGATGAAGTTGCTGGTGGTTGGACTGTGCAAGAGAAAGCCAATGGCGAG TCTGCGACAATCCAAGGTCTAGAACTGCAATATCAACAAGACTTTGGTAACGGCTTCGGCTCAATTGTTAACTACACTTA TACTGATAGTGAAACGAGTGAAAATACATATACAGATCGCAACCCGTTCTTAAGCGATAGTTCAAAGCATTCATATAACT TAACTGGTTATTTTGAAAACGATTTGTTCCAAGTTCGTTTAGCATATAACTGGCGTAGTGAGTATATGATCCGTGAAACT GGTTCATACGGTAATCGTTTACACGATGCATTTGGTAGCTTGGACTTGAGCGCAATTTGGCATGTTACTGATTATATGGA TATAAAGCTTGATGGTAATAACCTGTTAGAACCAGAATTCAGATAA
Upstream 100 bases:
>100_bases CTTCATCTTTAAATGCCTGCGGATAACTCTTATGTGATTTCTTCAGACTCATATAGACCTCTTAATTTATTGACCATACT GTCTCAAAATTAAGTGTCCG
Downstream 100 bases:
>100_bases TAACTGCGACACTCTAATCGAGGTGTAGAAGAAGCCAACTGCTGAAAAGTGGTACGCTTTATCTCGCCAAAGTAAAAGAG TATCACCATGAATTATCAAC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor-Like Protein; NB Dependent Receptor-Related Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; NB-Dependent Receptor Protein; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Subfamily Protein; 3-Dehydroquinate Synthase; DEAD/DEAH Box Helicase-Like; Nucleoside Diphosphate Kinase; NB Dependent Receptor Protein; Rhodanese-Like Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MGLDQNTVAFEQERERSAIAATFQYAPSDSLNFVFNAMDMQMAADNTNYALWFTQADTSWSGAPGSGAWDNTEWLGGCGL CGGDKPDASQSGSQVAGPVNLAYWQARPREATMKSQVFDLKMEYSGDGYQFTTQIGDTSSTGGTDFEMVVEDGLGGTALN GATYDFTNGHQTWDLNGFDTATYDPGSLVMGTGSNFNKTPKTDDETYIQADIKFDVDLGVVNAIKTGLKYAKHNTTSRRF DFVQADDFNPVISTAGLNTGTFAVGTSEYDIIRFDPDALKDWAKSSIIGETEDFGSYREIDEDNYAAYVMANFASEGVRG NFGVRYAGTEATSTYYVDGKKTDSSANYGEWLPSLNVAFDLAPDLILRASAARVMARPQYDDMYVNPNVLGANDDVPNNQ KWVVGNIGLKPFIANQIDLGIEWYFNEESLLSAALFMKDVKNFVTFSEYHADSADIPFTGTLKPDEVAGGWTVQEKANGE SATIQGLELQYQQDFGNGFGSIVNYTYTDSETSENTYTDRNPFLSDSSKHSYNLTGYFENDLFQVRLAYNWRSEYMIRET GSYGNRLHDAFGSLDLSAIWHVTDYMDIKLDGNNLLEPEFR
Sequences:
>Translated_601_residues MGLDQNTVAFEQERERSAIAATFQYAPSDSLNFVFNAMDMQMAADNTNYALWFTQADTSWSGAPGSGAWDNTEWLGGCGL CGGDKPDASQSGSQVAGPVNLAYWQARPREATMKSQVFDLKMEYSGDGYQFTTQIGDTSSTGGTDFEMVVEDGLGGTALN GATYDFTNGHQTWDLNGFDTATYDPGSLVMGTGSNFNKTPKTDDETYIQADIKFDVDLGVVNAIKTGLKYAKHNTTSRRF DFVQADDFNPVISTAGLNTGTFAVGTSEYDIIRFDPDALKDWAKSSIIGETEDFGSYREIDEDNYAAYVMANFASEGVRG NFGVRYAGTEATSTYYVDGKKTDSSANYGEWLPSLNVAFDLAPDLILRASAARVMARPQYDDMYVNPNVLGANDDVPNNQ KWVVGNIGLKPFIANQIDLGIEWYFNEESLLSAALFMKDVKNFVTFSEYHADSADIPFTGTLKPDEVAGGWTVQEKANGE SATIQGLELQYQQDFGNGFGSIVNYTYTDSETSENTYTDRNPFLSDSSKHSYNLTGYFENDLFQVRLAYNWRSEYMIRET GSYGNRLHDAFGSLDLSAIWHVTDYMDIKLDGNNLLEPEFR >Mature_600_residues GLDQNTVAFEQERERSAIAATFQYAPSDSLNFVFNAMDMQMAADNTNYALWFTQADTSWSGAPGSGAWDNTEWLGGCGLC GGDKPDASQSGSQVAGPVNLAYWQARPREATMKSQVFDLKMEYSGDGYQFTTQIGDTSSTGGTDFEMVVEDGLGGTALNG ATYDFTNGHQTWDLNGFDTATYDPGSLVMGTGSNFNKTPKTDDETYIQADIKFDVDLGVVNAIKTGLKYAKHNTTSRRFD FVQADDFNPVISTAGLNTGTFAVGTSEYDIIRFDPDALKDWAKSSIIGETEDFGSYREIDEDNYAAYVMANFASEGVRGN FGVRYAGTEATSTYYVDGKKTDSSANYGEWLPSLNVAFDLAPDLILRASAARVMARPQYDDMYVNPNVLGANDDVPNNQK WVVGNIGLKPFIANQIDLGIEWYFNEESLLSAALFMKDVKNFVTFSEYHADSADIPFTGTLKPDEVAGGWTVQEKANGES ATIQGLELQYQQDFGNGFGSIVNYTYTDSETSENTYTDRNPFLSDSSKHSYNLTGYFENDLFQVRLAYNWRSEYMIRETG SYGNRLHDAFGSLDLSAIWHVTDYMDIKLDGNNLLEPEFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66435; Mature: 66304
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLDQNTVAFEQERERSAIAATFQYAPSDSLNFVFNAMDMQMAADNTNYALWFTQADTSW CCCCCCCEEHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCC SGAPGSGAWDNTEWLGGCGLCGGDKPDASQSGSQVAGPVNLAYWQARPREATMKSQVFDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCEEEEE KMEYSGDGYQFTTQIGDTSSTGGTDFEMVVEDGLGGTALNGATYDFTNGHQTWDLNGFDT EEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCEEEECCCCCEEEECCCCCC ATYDPGSLVMGTGSNFNKTPKTDDETYIQADIKFDVDLGVVNAIKTGLKYAKHNTTSRRF CEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEE DFVQADDFNPVISTAGLNTGTFAVGTSEYDIIRFDPDALKDWAKSSIIGETEDFGSYREI EEEECCCCCCEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCC DEDNYAAYVMANFASEGVRGNFGVRYAGTEATSTYYVDGKKTDSSANYGEWLPSLNVAFD CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEE LAPDLILRASAARVMARPQYDDMYVNPNVLGANDDVPNNQKWVVGNIGLKPFIANQIDLG CCCHHHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCEEEEECCCCCCEECCEEEEE IEWYFNEESLLSAALFMKDVKNFVTFSEYHADSADIPFTGTLKPDEVAGGWTVQEKANGE EEEEECHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCC SATIQGLELQYQQDFGNGFGSIVNYTYTDSETSENTYTDRNPFLSDSSKHSYNLTGYFEN CEEEEEEEEEEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DLFQVRLAYNWRSEYMIRETGSYGNRLHDAFGSLDLSAIWHVTDYMDIKLDGNNLLEPEF CEEEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCCC R C >Mature Secondary Structure GLDQNTVAFEQERERSAIAATFQYAPSDSLNFVFNAMDMQMAADNTNYALWFTQADTSW CCCCCCEEHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCC SGAPGSGAWDNTEWLGGCGLCGGDKPDASQSGSQVAGPVNLAYWQARPREATMKSQVFDL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCEEEEE KMEYSGDGYQFTTQIGDTSSTGGTDFEMVVEDGLGGTALNGATYDFTNGHQTWDLNGFDT EEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEECCEEEECCCCCEEEECCCCCC ATYDPGSLVMGTGSNFNKTPKTDDETYIQADIKFDVDLGVVNAIKTGLKYAKHNTTSRRF CEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEE DFVQADDFNPVISTAGLNTGTFAVGTSEYDIIRFDPDALKDWAKSSIIGETEDFGSYREI EEEECCCCCCEEEECCCCCCEEEECCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCC DEDNYAAYVMANFASEGVRGNFGVRYAGTEATSTYYVDGKKTDSSANYGEWLPSLNVAFD CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEE LAPDLILRASAARVMARPQYDDMYVNPNVLGANDDVPNNQKWVVGNIGLKPFIANQIDLG CCCHHHHHHHHHHHHCCCCCCCEEECCCEECCCCCCCCCCEEEEECCCCCCEECCEEEEE IEWYFNEESLLSAALFMKDVKNFVTFSEYHADSADIPFTGTLKPDEVAGGWTVQEKANGE EEEEECHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCC SATIQGLELQYQQDFGNGFGSIVNYTYTDSETSENTYTDRNPFLSDSSKHSYNLTGYFEN CEEEEEEEEEEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC DLFQVRLAYNWRSEYMIRETGSYGNRLHDAFGSLDLSAIWHVTDYMDIKLDGNNLLEPEF CEEEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA