Click here to switch to the map view.

The map label for this gene is yaaJ [H]

Identifier: 126173291

GI number: 126173291

Start: 1207151

End: 1208593

Strand: Direct

Name: yaaJ [H]

Synonym: Sbal_1047

Alternate gene names: 126173291

Gene position: 1207151-1208593 (Clockwise)

Preceding gene: 126173285

Following gene: 126173292

Centisome position: 23.54

GC content: 46.57

Gene sequence:

>1443_bases
ATGTTAGAAACCATAGTTAATTTTTTGAATGCGCTACTTTGGGGTAAGTTGTTAGTATATGGACTGGTAGGAGCTGGTCT
TTATTTCACCATAAGACTTGCCTTTATCCAGTTAACCTACTTTAAACATTCCATCAAAGTCATGACCATGAGTCGCCAAG
GTTGCGATAGCGGTCTTTCATCATTTCAAGTCTTTTGTACCAGTATGGCGGCCCGTGTCGGTGCCGGTAATATGGCCGGT
GTTGCAGTCGCTATTGGTGCTGCAGGTCCTGGTGCGGTATTTTGGATGTGGCTTATCGCTATCTTAGGTATGGCTACCGC
TATGGTTGAATCAACCTTAGCGCAGGTTTACAAAGTGCGAGATCATAACGGTCAGTTCCGTGGCGGTCCTTCCTATTATA
TGGAAAAAGGCTTAGGTCAGCGCTGGATGGGCATTTTGTTTGCCGTCTTTCTGATCATTGCCTTTGGTCTGGTATTCAAC
GCGGTACAAGCGAATACCATTACCGGAGCGATGGAGCGAGTATTTGGGTTTAATCCTACTTATGTCGGGATTGGACTGGT
GATTGCCAGTGGGTTTGTGATTGTCGGTGGTCTGCGTAAAGTCGCACGAGTCTCTGAGTTTATTGTCCCTATCATGGCAT
TAGCCTACATTATCGTTGCCTTCATTATCGTTATTTTCAACCTGGATCAATTGCCTGCGATTATTAGCTTAATTGTGAAG
AGTGCTTTTGGTTGGCAAGAGGCGGCTGCTGGCGGCGTGGCTTATACCGTCGCGCAGGCTATGCAAGCGGGTATTGCACG
CGGACTTTTCTCAAATGAAGCGGGTATGGGCAGCGCGGCGAATGTCGCGGCTAGTGCATCGCCTAATCCGAACCATCCGG
CATCCCAAGGTTTTGTCCAGATGATGGGGGTATTTGCGGATACTATCGTTATCTGTACTGCAACGGCTGCAATTATCCTG
CTATCAGGGGATGTGGGTTCGAGTGACGATGGCATTCGTTTAACCATCAATGCCATGTCATCCCATGTTGGTGACTGGGG
TGGTGCATTTATTGCGGTGGCGATTTTCTTATTCTGCTTTACATCCATCATAGCCAATTACTCTTACGCTGAAACAAACG
TAATGTTTTTAATGGGTAACAGTACCAAATTACTTCCTTTGTTCCGTTTGTGTGTATTGGGCATGGTAATGTTTGGTGCC
GTGGCGAAGATAAGTCTAGTGTGGAACTTAGCCGACGTTTCTATGGGATTGATGGCGACAGTGAACATTATTGCGCTCTT
ACTGTTGTCAGGTTTGGCCATTCGCGTCATCAATGATTATCGCGAGCAGGTTAAAGCGGGTAAGACGCCAGAGTTTGACC
GCAGTAAGTTTCCTGAATTGTTGGATCAACTCGATGATGACATTTGGCAAGATGCCAGTCTCAAGCCGATTAAAAAGCCT
TAG

Upstream 100 bases:

>100_bases
TTCTTACCTTTAACTTGGAAGGATTCATTCACCACAGATGTTGTACCTCTAATTGCCATTCAATTAGAGGAGCATTTGCT
ACGGGAAGAAGTAAAATAAT

Downstream 100 bases:

>100_bases
TTAACCCAAATTATCGACGACAGGTATAACTGATTGTCGTAATCGAAAAGACCACGCCGTTAAAGCGTGGTTTTTTTATG
TTCGTTCAGTATCATAGACA

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MLETIVNFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTYFKHSIKVMTMSRQGCDSGLSSFQVFCTSMAARVGAGNMAG
VAVAIGAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDHNGQFRGGPSYYMEKGLGQRWMGILFAVFLIIAFGLVFN
AVQANTITGAMERVFGFNPTYVGIGLVIASGFVIVGGLRKVARVSEFIVPIMALAYIIVAFIIVIFNLDQLPAIISLIVK
SAFGWQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFADTIVICTATAAIIL
LSGDVGSSDDGIRLTINAMSSHVGDWGGAFIAVAIFLFCFTSIIANYSYAETNVMFLMGNSTKLLPLFRLCVLGMVMFGA
VAKISLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYREQVKAGKTPEFDRSKFPELLDQLDDDIWQDASLKPIKKP

Sequences:

>Translated_480_residues
MLETIVNFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTYFKHSIKVMTMSRQGCDSGLSSFQVFCTSMAARVGAGNMAG
VAVAIGAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDHNGQFRGGPSYYMEKGLGQRWMGILFAVFLIIAFGLVFN
AVQANTITGAMERVFGFNPTYVGIGLVIASGFVIVGGLRKVARVSEFIVPIMALAYIIVAFIIVIFNLDQLPAIISLIVK
SAFGWQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFADTIVICTATAAIIL
LSGDVGSSDDGIRLTINAMSSHVGDWGGAFIAVAIFLFCFTSIIANYSYAETNVMFLMGNSTKLLPLFRLCVLGMVMFGA
VAKISLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYREQVKAGKTPEFDRSKFPELLDQLDDDIWQDASLKPIKKP
>Mature_480_residues
MLETIVNFLNALLWGKLLVYGLVGAGLYFTIRLAFIQLTYFKHSIKVMTMSRQGCDSGLSSFQVFCTSMAARVGAGNMAG
VAVAIGAAGPGAVFWMWLIAILGMATAMVESTLAQVYKVRDHNGQFRGGPSYYMEKGLGQRWMGILFAVFLIIAFGLVFN
AVQANTITGAMERVFGFNPTYVGIGLVIASGFVIVGGLRKVARVSEFIVPIMALAYIIVAFIIVIFNLDQLPAIISLIVK
SAFGWQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGVFADTIVICTATAAIIL
LSGDVGSSDDGIRLTINAMSSHVGDWGGAFIAVAIFLFCFTSIIANYSYAETNVMFLMGNSTKLLPLFRLCVLGMVMFGA
VAKISLVWNLADVSMGLMATVNIIALLLLSGLAIRVINDYREQVKAGKTPEFDRSKFPELLDQLDDDIWQDASLKPIKKP

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=470, Percent_Identity=48.5106382978723, Blast_Score=437, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 51260; Mature: 51260

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]