Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

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The map label for this gene is bfr [H]

Identifier: 126173178

GI number: 126173178

Start: 1070619

End: 1071086

Strand: Direct

Name: bfr [H]

Synonym: Sbal_0933

Alternate gene names: 126173178

Gene position: 1070619-1071086 (Clockwise)

Preceding gene: 126173177

Following gene: 126173179

Centisome position: 20.88

GC content: 47.44

Gene sequence:

>468_bases
ATGAAAGGCGATAAAGACGTCATCGATGCGTTAAATCGACTCCTAACGGGAGAACTCTCGGCAATGGATCAATATTTTGT
CCATGCCCATATGTACGAAGATTGGGGCTTGAATGAACTCTATGAGCGCATCGCCCATGAATCCGATGATGAAAAAGCCC
ATGCGGCCAAATTAGTACAGCGTATTTTATTCCTCGAAGGAACGCCTAATGTTGCCGCCCGTGAGGCGTTGAACATAGGT
AAAGATGTGGAAGAGATGCTGCGTAATGATCTCGCCTACGAGTACAAGGTCGCGGACGATTTGCGCCAAGTGATTGCCCT
GTGTGAGCAGAAGCAAGATTACCAAACCCGCGAAATCCTCGAAGTGTTACTCGACGATACTGAGTCGGACCACATGTATT
GGCTCGAAAAACAACTCGGACTTATCGACCGTGTCGGGCTGCAAAACTACATGCAAACTAAGATGTAA

Upstream 100 bases:

>100_bases
AGAGCATTTAGATTGGCTCGAGTCGCAGCAAGAGCTCATTACGCTAACCGGTATTCAAAATTATCTACAATCGCAAATTA
GCGACCAATAGGAGCGGGAT

Downstream 100 bases:

>100_bases
TCGCTAAATCGAGATCAGCGAGGCTAACTCGCTGATCTTATTTCTACCGCTTCCTATTTTTCGAATCCCTATATAGTCTA
TCTGACTGTAAAACTTTGCC

Product: bacterioferritin

Products: NA

Alternate protein names: BFR [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKGDKDVIDALNRLLTGELSAMDQYFVHAHMYEDWGLNELYERIAHESDDEKAHAAKLVQRILFLEGTPNVAAREALNIG
KDVEEMLRNDLAYEYKVADDLRQVIALCEQKQDYQTREILEVLLDDTESDHMYWLEKQLGLIDRVGLQNYMQTKM

Sequences:

>Translated_155_residues
MKGDKDVIDALNRLLTGELSAMDQYFVHAHMYEDWGLNELYERIAHESDDEKAHAAKLVQRILFLEGTPNVAAREALNIG
KDVEEMLRNDLAYEYKVADDLRQVIALCEQKQDYQTREILEVLLDDTESDHMYWLEKQLGLIDRVGLQNYMQTKM
>Mature_155_residues
MKGDKDVIDALNRLLTGELSAMDQYFVHAHMYEDWGLNELYERIAHESDDEKAHAAKLVQRILFLEGTPNVAAREALNIG
KDVEEMLRNDLAYEYKVADDLRQVIALCEQKQDYQTREILEVLLDDTESDHMYWLEKQLGLIDRVGLQNYMQTKM

Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=49.6774193548387, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002024
- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18094; Mature: 18094

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGDKDVIDALNRLLTGELSAMDQYFVHAHMYEDWGLNELYERIAHESDDEKAHAAKLVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH
RILFLEGTPNVAAREALNIGKDVEEMLRNDLAYEYKVADDLRQVIALCEQKQDYQTREIL
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVLLDDTESDHMYWLEKQLGLIDRVGLQNYMQTKM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGDKDVIDALNRLLTGELSAMDQYFVHAHMYEDWGLNELYERIAHESDDEKAHAAKLVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH
RILFLEGTPNVAAREALNIGKDVEEMLRNDLAYEYKVADDLRQVIALCEQKQDYQTREIL
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVLLDDTESDHMYWLEKQLGLIDRVGLQNYMQTKM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 1536655 [H]