Click here to switch to the map view.

The map label for this gene is mdoD [H]

Identifier: 126173122

GI number: 126173122

Start: 997203

End: 998891

Strand: Direct

Name: mdoD [H]

Synonym: Sbal_0877

Alternate gene names: 126173122

Gene position: 997203-998891 (Clockwise)

Preceding gene: 126173121

Following gene: 126173123

Centisome position: 19.45

GC content: 49.5

Gene sequence:

>1689_bases
ATGCAACCCAATTTATTTCCCGAACAAAGAAACGTTTACCAACAATCGATGGTGACAGTACCTTCGATTGAAGCCCAATC
CTCCTCTCGTCGCGGCCGTTTGCAGCGCATGGTTGGCAGCGTATTGTTAACCTGTAGCGTATTGCTGAGTCTTTCGGCGT
GTGCGGCGGGTAAGCAGGCGTCACCACAAGAAGGTGAAGAGTTCAGTTACGCTTGGCTTAAGGGCTACGCCCGTACTATG
GCTGCACAACCCTATGAAAGCCATAAAGGCGAATTGCCTAAAAGCCTTCAGGGCATGAGCTGGGATGATTACCAACAATT
CCACTTCAAGAAGAAAGCCGCACTGTGGCGCGATCAGGACTCGGAATTTCGTGCCGAGCTGTTCCACCTAGGGCTGTATT
TCGACACGCCAATTCACATCTATGAATTGAATGAAGGTAAGGCTAAGTTAATCGACTATTCGCCTTCTATGTTCGATTAC
GGCAAGTCAAAGGTGAAAGGCAGTCAGTTGCCTAAGGATCTTGGCTTTGCGGGTTTCCGTATGCAGTTCAATACCGATTG
GGAACGCGACGTTGTCGCTTTCCTTGGCGCCAGCTATTTCCGCGCTGTGGGTCATGAGATGCAATACGGCCTGTCGGCTC
GTGGTTTAGCGGTGGATACTGCGCTGCCAAAACCTGAAGAGTTTCCAATGTTCACCGACTTCTGGTTAGAAAAACCTAAA
CCAGGATCGAATATCACGACTGTGTATGCCTTGTTAGACTCTCCGAGTGTGACAGGTGCTTACCGTTTCGATATCGAGCC
GGGTGAGCGTTTAAAAATGAAGGTGGATGTGGCTGTTTATCCACGTAAAGCGATTGAACGTTTAGGCGTAGCGCCATTGA
CCAGTATGTTTATGGTGGGGGAGAACGATCGCCGCACCGGTTACGACTGGCGTCCAGAAATCCATGATACCGATGGCTTA
GCCATGCACACGGGTAATGGTGAATGGATTTGGCGTCCACTAGGTAACCCAGAAAACCTACGATTCAACGCCTATAGCGA
TGAAAATCCAAAAGGTTTTGGCTTACTGCAACGTGACCGTAACTTCGATCACTATCAGGATGACGGCGTGTTTTATGATA
AACGCCCAAGCCTGTGGATTGAACCAACCAGCAGTTGGGGCAAAGGTTCGGTGCAGTTAGTTGAAATCCCAACACTGGAT
GAAACCTTCGATAACATAGTCGCATTTTGGAATCCTGCTGAGCCGATTGTTCCGGGTCAAGAGCTGCTGTACAGCTACAA
CATGTATTGGGGCGGCATTCCACCGGTTCAATCACCCCGTGCTCGCGTTGTTGATACCTTCACCGGGATTGGCGGCGTAG
TTGGCCAGAAACGCAAATACTACAGTAAGCGTTTTGTGGTGGATTTCGCGGGCGGCACTTTGCCTATGATAGGCAAAGAC
ACCCAAGTAAAAGCCGTGATCACTGCATCTGAAGGCAAAGTCGAAATTGAATCTGCCCGTCCTCTAGCGTCCATTAATGG
TTACCGCGCTATGTTTGACGTAGTGCCACCCGGAGACGGTACTGAGCCGATTAACCTGAGAGTCTATTTAGAAGTTGATG
GCCAGCCATTGTCTGAAACTTGGATGTATCAGTGGAATCCGCCCGCTAAGGATGATCGTGAATTGCACAATGCGGGTCAT
CTGCAATAA

Upstream 100 bases:

>100_bases
TGTTACCTCTGTCATCAACAGTTCTCCACAGGGCCATCACTGCAATTTGGTTAGATTTGCAGGGAAGTGTCAGGAAGTTA
CACCAATTCAGAGTCTGCTT

Downstream 100 bases:

>100_bases
ACGATTAGTGAGTTATTAATCTAAAACGCCAGCTAACTTAGCTGGCGTTTTTTGTTTTGGCGATGAACAAGATGCGGTGA
ATGCCGCTATTTGCCTCTAA

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MQPNLFPEQRNVYQQSMVTVPSIEAQSSSRRGRLQRMVGSVLLTCSVLLSLSACAAGKQASPQEGEEFSYAWLKGYARTM
AAQPYESHKGELPKSLQGMSWDDYQQFHFKKKAALWRDQDSEFRAELFHLGLYFDTPIHIYELNEGKAKLIDYSPSMFDY
GKSKVKGSQLPKDLGFAGFRMQFNTDWERDVVAFLGASYFRAVGHEMQYGLSARGLAVDTALPKPEEFPMFTDFWLEKPK
PGSNITTVYALLDSPSVTGAYRFDIEPGERLKMKVDVAVYPRKAIERLGVAPLTSMFMVGENDRRTGYDWRPEIHDTDGL
AMHTGNGEWIWRPLGNPENLRFNAYSDENPKGFGLLQRDRNFDHYQDDGVFYDKRPSLWIEPTSSWGKGSVQLVEIPTLD
ETFDNIVAFWNPAEPIVPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVVDFAGGTLPMIGKD
TQVKAVITASEGKVEIESARPLASINGYRAMFDVVPPGDGTEPINLRVYLEVDGQPLSETWMYQWNPPAKDDRELHNAGH
LQ

Sequences:

>Translated_562_residues
MQPNLFPEQRNVYQQSMVTVPSIEAQSSSRRGRLQRMVGSVLLTCSVLLSLSACAAGKQASPQEGEEFSYAWLKGYARTM
AAQPYESHKGELPKSLQGMSWDDYQQFHFKKKAALWRDQDSEFRAELFHLGLYFDTPIHIYELNEGKAKLIDYSPSMFDY
GKSKVKGSQLPKDLGFAGFRMQFNTDWERDVVAFLGASYFRAVGHEMQYGLSARGLAVDTALPKPEEFPMFTDFWLEKPK
PGSNITTVYALLDSPSVTGAYRFDIEPGERLKMKVDVAVYPRKAIERLGVAPLTSMFMVGENDRRTGYDWRPEIHDTDGL
AMHTGNGEWIWRPLGNPENLRFNAYSDENPKGFGLLQRDRNFDHYQDDGVFYDKRPSLWIEPTSSWGKGSVQLVEIPTLD
ETFDNIVAFWNPAEPIVPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVVDFAGGTLPMIGKD
TQVKAVITASEGKVEIESARPLASINGYRAMFDVVPPGDGTEPINLRVYLEVDGQPLSETWMYQWNPPAKDDRELHNAGH
LQ
>Mature_562_residues
MQPNLFPEQRNVYQQSMVTVPSIEAQSSSRRGRLQRMVGSVLLTCSVLLSLSACAAGKQASPQEGEEFSYAWLKGYARTM
AAQPYESHKGELPKSLQGMSWDDYQQFHFKKKAALWRDQDSEFRAELFHLGLYFDTPIHIYELNEGKAKLIDYSPSMFDY
GKSKVKGSQLPKDLGFAGFRMQFNTDWERDVVAFLGASYFRAVGHEMQYGLSARGLAVDTALPKPEEFPMFTDFWLEKPK
PGSNITTVYALLDSPSVTGAYRFDIEPGERLKMKVDVAVYPRKAIERLGVAPLTSMFMVGENDRRTGYDWRPEIHDTDGL
AMHTGNGEWIWRPLGNPENLRFNAYSDENPKGFGLLQRDRNFDHYQDDGVFYDKRPSLWIEPTSSWGKGSVQLVEIPTLD
ETFDNIVAFWNPAEPIVPGQELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVVDFAGGTLPMIGKD
TQVKAVITASEGKVEIESARPLASINGYRAMFDVVPPGDGTEPINLRVYLEVDGQPLSETWMYQWNPPAKDDRELHNAGH
LQ

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=520, Percent_Identity=44.2307692307692, Blast_Score=435, Evalue=1e-123,
Organism=Escherichia coli, GI1787286, Length=511, Percent_Identity=41.2915851272016, Blast_Score=382, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 63586; Mature: 63586

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPNLFPEQRNVYQQSMVTVPSIEAQSSSRRGRLQRMVGSVLLTCSVLLSLSACAAGKQA
CCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SPQEGEEFSYAWLKGYARTMAAQPYESHKGELPKSLQGMSWDDYQQFHFKKKAALWRDQD
CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC
SEFRAELFHLGLYFDTPIHIYELNEGKAKLIDYSPSMFDYGKSKVKGSQLPKDLGFAGFR
HHHHHHHEEEEEEECCCEEEEEECCCCEEEEECCCCHHHCCHHHCCCCCCCHHHCCCEEE
MQFNTDWERDVVAFLGASYFRAVGHEMQYGLSARGLAVDTALPKPEEFPMFTDFWLEKPK
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCC
PGSNITTVYALLDSPSVTGAYRFDIEPGERLKMKVDVAVYPRKAIERLGVAPLTSMFMVG
CCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCHHHEEEEC
ENDRRTGYDWRPEIHDTDGLAMHTGNGEWIWRPLGNPENLRFNAYSDENPKGFGLLQRDR
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEECCC
NFDHYQDDGVFYDKRPSLWIEPTSSWGKGSVQLVEIPTLDETFDNIVAFWNPAEPIVPGQ
CCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCH
ELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVVDFAGGTLPMIGKD
HHHEEECCEECCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHCCEEEEEECCCEECCCCCC
TQVKAVITASEGKVEIESARPLASINGYRAMFDVVPPGDGTEPINLRVYLEVDGQPLSET
CEEEEEEEECCCEEEEECCCCCHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCC
WMYQWNPPAKDDRELHNAGHLQ
EEEEECCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MQPNLFPEQRNVYQQSMVTVPSIEAQSSSRRGRLQRMVGSVLLTCSVLLSLSACAAGKQA
CCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SPQEGEEFSYAWLKGYARTMAAQPYESHKGELPKSLQGMSWDDYQQFHFKKKAALWRDQD
CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCC
SEFRAELFHLGLYFDTPIHIYELNEGKAKLIDYSPSMFDYGKSKVKGSQLPKDLGFAGFR
HHHHHHHEEEEEEECCCEEEEEECCCCEEEEECCCCHHHCCHHHCCCCCCCHHHCCCEEE
MQFNTDWERDVVAFLGASYFRAVGHEMQYGLSARGLAVDTALPKPEEFPMFTDFWLEKPK
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHCCCCC
PGSNITTVYALLDSPSVTGAYRFDIEPGERLKMKVDVAVYPRKAIERLGVAPLTSMFMVG
CCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCHHHEEEEC
ENDRRTGYDWRPEIHDTDGLAMHTGNGEWIWRPLGNPENLRFNAYSDENPKGFGLLQRDR
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCEEEECCC
NFDHYQDDGVFYDKRPSLWIEPTSSWGKGSVQLVEIPTLDETFDNIVAFWNPAEPIVPGQ
CCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEEEECCCHHHHHCEEEEECCCCCCCCCH
ELLYSYNMYWGGIPPVQSPRARVVDTFTGIGGVVGQKRKYYSKRFVVDFAGGTLPMIGKD
HHHEEECCEECCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHCCEEEEEECCCEECCCCCC
TQVKAVITASEGKVEIESARPLASINGYRAMFDVVPPGDGTEPINLRVYLEVDGQPLSET
CEEEEEEEECCCEEEEECCCCCHHCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCC
WMYQWNPPAKDDRELHNAGHLQ
EEEEECCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]