| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126173080
Identifier: 126173080
GI number: 126173080
Start: 939281
End: 940684
Strand: Direct
Name: 126173080
Synonym: Sbal_0835
Alternate gene names: NA
Gene position: 939281-940684 (Clockwise)
Preceding gene: 126173079
Following gene: 126173087
Centisome position: 18.32
GC content: 46.79
Gene sequence:
>1404_bases GTGTCTAAGATACGTGTAAAGCAAGAAGAATCCCTGTCGATTAAGTTCAGCCATCAGATGGAAAAGGGCGATAATCGTCA GCTCGATCTCTATTTCTTTTTACCAAAGGAAATGGGCATAGGCTCGCACACGCTCAATGAAGAAGAGTACTACTACAGCG CGATTGTCGGCCGTCGTTCTTACTATTCAGAAGGCTTGCACTTACCTTTGGTACAGGGCCGCTTTGCCAGTTTAAATCGC CGCACCGTTGAAGAATTCAGATTGTACTTGAATCTGTTCGCCTATCAGTTTGCCGTTGCAGTCGAAAACGATGTTAAAGA ACTCAATCAAATCACAGATGTAACCCATTTCTATTTTGCCCTCGACGAATTACGCGAACAAGTTGGCCTGTTGCTGAAAA AGTTTCGTCGTAACGAACCGGGCGATCCTAAATGGAAATCCTACTTCGAAAATGCCGACAACTACCTGTCTTGGTTCTGC GAGCAGCAGTTACTAAAAGTGCTCGCCCATGCCACAAGAACCAGTGATTTCAACGATATCCAAGAACGGGTGCTAACACT GTGTCGCAATGAGTGTGCCTATCGGGATGAGCATAACTACAACTCGGCGCAAACTAAGCAAGATCCTAACCGCATCTCAA ACAAGATGTTGTTGTTACGACGTTTAATCCAACAAGGTGTGGTACTCAAAGAAGAGTTAAAGCCCTTAGGGATTGGCCTT AAAAAGTTCACGACGGGACTGGCAACGGCGTTAGTGATGTTGGTGGTGTCGGCGTTGATAATTCAAGCGCAGGGCGCCTT CAGCGGCTTTACCATTGCCTTAGTGCTGACCTTGGCGGTGATTTACGGTTTCAGGGAAATCTTTAAGGATGACGTGCGTA ATGCCATGTGGCGTTTTATTCAGCGGGGCAGGCCACGCTGGAGCCGGATTTTGCGTGATACCACTAGTCAGGCGGTGATT GCTAAGCAGTTAGTATGGCTTGAGTTTATGCGCCAGCAAGATCTGCCCGATAAAGTCAGCGAAATTCTAAAGCACAGGCA TAGCCAAAATAAGGTCGATGCGGAAATCCTGCACTATAAAATTGCCACTAAGGTCAATCAGAGTGAGTTCCAAGCGGGAT ACTCCACCATTCAAGAGCAAGTTAACTTTAGTTTAGTGCCCTTTGCCCGCTACTTAGAGCGGGGTAAGGCGAAGATTTAT AAGGAAGTTGAAGGCAAAATCAGCCATGAATCGGTTGAGCGGCGTTATCAAGTCAACTTGATTTTAGTGCTACGCGATGG CCGCGAAGCCCCGCAGTATATTCGCTACAAAATCACCATGAACCGCTCGACGATTATTGAGATTACCCAGAGCCAATTGC CCGATTCGGTCAACATGCCCGAATCTACGATTGATGACGAGTAA
Upstream 100 bases:
>100_bases AATTTAATCAGTGAATTTGAGTTTATTTCAGTTAAGATTAGTGCTCATTGATTTATGTCTACTGCGATGAGTCTCTGTGA GGGCTCATGAAAAGGGTGTT
Downstream 100 bases:
>100_bases AGGCCTGACCGATATTTTGATCGTTATTCTGTTTCGCCCGTTTTAGGGCGACTTCGGCATTATTTAGATACTGCTCAAGT GTTTGGCCTTCTTGATAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSAIVGRRSYYSEGLHLPLVQGRFASLNR RTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGLLLKKFRRNEPGDPKWKSYFENADNYLSWFC EQQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVI AKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIY KEVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE
Sequences:
>Translated_467_residues MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSAIVGRRSYYSEGLHLPLVQGRFASLNR RTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGLLLKKFRRNEPGDPKWKSYFENADNYLSWFC EQQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVI AKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIY KEVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE >Mature_466_residues SKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSAIVGRRSYYSEGLHLPLVQGRFASLNRR TVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGLLLKKFRRNEPGDPKWKSYFENADNYLSWFCE QQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGLK KFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVIA KQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYK EVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54624; Mature: 54493
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSAIVGRRS CCCCCCCCCCCCEEEEEHHHCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHH YYSEGLHLPLVQGRFASLNRRTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELREQVGLLLKKFRRNEPGDPKWKSYFENADNYLSWFCEQQLLKVLAHATRTSDFNDI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGRPRWSRILRDTTSQAVIAKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH IATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYKEVEGKISHESVERRYQVNL HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEE ILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE EEEEECCCCCCCEEEEEEEECCCHHEEEHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSAIVGRRS CCCCCCCCCCCEEEEEHHHCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHH YYSEGLHLPLVQGRFASLNRRTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELREQVGLLLKKFRRNEPGDPKWKSYFENADNYLSWFCEQQLLKVLAHATRTSDFNDI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGRPRWSRILRDTTSQAVIAKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH IATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYKEVEGKISHESVERRYQVNL HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEE ILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE EEEEECCCCCCCEEEEEEEECCCHHEEEHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA