| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is rstB [H]
Identifier: 126172996
GI number: 126172996
Start: 845036
End: 846328
Strand: Direct
Name: rstB [H]
Synonym: Sbal_0750
Alternate gene names: 126172996
Gene position: 845036-846328 (Clockwise)
Preceding gene: 126172995
Following gene: 126173000
Centisome position: 16.48
GC content: 48.18
Gene sequence:
>1293_bases ATGAAGAAGTTGATGACTTCACTGGTGCTGGTGGTGCTGGTGGCCATTGCGAGCCTAGGCTGGTCGATAAGCGAGTTTGC CAGTCTGCTAGATCATGATAATGACACGCAAACCCCAGCCACTCACCTCGCCGCATTAAAACTACTGGGCGGCACACTGG CGCAAACGCTCGATAACGATAGCGTTAACAATCAAAGTATTATCGCAAACTGGAACCAGCTAAATTCAGAGCAATTGTCT TTAGCGAGTGAAGCCGATTTCGTCTTACCCTCAGCCCTAAAAACCGCGTTTTATGCCGGGGAATCACTCCTGTTGGAGTC CGATGACGGCATCTCCTTGCATTATTTACTGCCAAAAACGGGGCAGGTTTTAAACATCAATACCGATATTGTCACGCCCA CCGATGTCAGCTTTGACTTGAATAAGCTGTATACCATGCTTTTTTATGGCGGCGTGGTGCTGATTTTGTTGGTGTGGGTG TCACCCTTGATCCGTCAACTGGTTAATCTCAGTAAGGCGACCCAAGCGTTTGGTATGGGGGAGTTGCAGCAGAGAATTCC TGTTAGAAAAACGTCGTACATAGGTACTATTGAAAGCGAATTCAACCGCATGGCGGATCGTATTCAGCAATTGATCGATG ACAATAAACTGCTCAGTCGAGCAGTTTCTCACGATTTAAAAACCCCGATTGCACGGCTAAGATTTGGCATTGAGGCGCTG GAAGAAACCCAAAGCGAACAGCTCAGAGTGAAGTATTTCCAGCGCTTGAACCGCGATCTAGACACTATGGAAGACTTGGT GATGACGCTGCTGAGTTATGCCCGCCTCGATGAAGCGAATATCCAGCCCGATTGGCAGTCGATTGAGCTCAATGCTTGGC TACTCGAAAAGTATCAAGGCCAAGTGTACCCCGATTTTTCAGTTGAACTGGTTTCCTATCCCACAGCACTCAAGATCAAG ACAGATCCCAAGTACTTATCAATGCAGGTGAATAATTTGCTCAATAATGCGCTGCGTTTTGGTAAGGCAAAGATTCGGCT GACGTTGGCAGTCGAGGAGGGCGCGACCTGGTTACACGTTGACGATGACGGTCCAGGCATAGATGAACTGGAGTCTATGC AGGTGATTAAGCCTTTTGTGCGTGGTCAGCACAGTCGTGGAAATTCCGGTCATGGCATGGGATTGGCGATTGTCGACAGA ATCGGTTATTGGATGAATGCCCCATTACGTATTGGACGTGCTCCTGAGCTCGGTGGCGCTCGCATGTCACTAAAATTCAA GGCTGAAATTTAA
Upstream 100 bases:
>100_bases TACGCAAGAAATTGCAGGAAGCGTTAAGCCAGCCCTATAAAGTGAAAACCATCCGTGGCAAGGGATACCTTTTTTGCCGT GACGAGGGTGAGCAAGCTTT
Downstream 100 bases:
>100_bases CGCTGAAGTTTCGGACTGGAGATTTAGACCGGAATTTAAGGCTGAATTTTAAAGCGGAGTTTAAGGCAAGAGTTTAAGAC TGGATTTTAACGCTGCATAA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDHDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNQSIIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDVSFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKTSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESMQVIKPFVRGQHSRGNSGHGMGLAIVDR IGYWMNAPLRIGRAPELGGARMSLKFKAEI
Sequences:
>Translated_430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDHDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNQSIIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDVSFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKTSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESMQVIKPFVRGQHSRGNSGHGMGLAIVDR IGYWMNAPLRIGRAPELGGARMSLKFKAEI >Mature_430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDHDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNQSIIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDVSFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKTSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESMQVIKPFVRGQHSRGNSGHGMGLAIVDR IGYWMNAPLRIGRAPELGGARMSLKFKAEI
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=276, Percent_Identity=34.7826086956522, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1789808, Length=255, Percent_Identity=31.7647058823529, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790346, Length=211, Percent_Identity=27.0142180094787, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790551, Length=284, Percent_Identity=26.7605633802817, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1788393, Length=275, Percent_Identity=22.9090909090909, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1790861, Length=215, Percent_Identity=26.5116279069767, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=108, Percent_Identity=35.1851851851852, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788279, Length=277, Percent_Identity=24.9097472924188, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1788549, Length=233, Percent_Identity=24.0343347639485, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48035; Mature: 48035
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMTSLVLVVLVAIASLGWSISEFASLLDHDNDTQTPATHLAALKLLGGTLAQTLDND CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SVNNQSIIANWNQLNSEQLSLASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKT CCCCCEEEECHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC GQVLNINTDIVTPTDVSFDLNKLYTMLFYGGVVLILLVWVSPLIRQLVNLSKATQAFGMG CCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELQQRIPVRKTSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL HHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCC QVYPDFSVELVSYPTALKIKTDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHV CCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEE DDDGPGIDELESMQVIKPFVRGQHSRGNSGHGMGLAIVDRIGYWMNAPLRIGRAPELGGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCC RMSLKFKAEI EEEEEEEECC >Mature Secondary Structure MKKLMTSLVLVVLVAIASLGWSISEFASLLDHDNDTQTPATHLAALKLLGGTLAQTLDND CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SVNNQSIIANWNQLNSEQLSLASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKT CCCCCEEEECHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC GQVLNINTDIVTPTDVSFDLNKLYTMLFYGGVVLILLVWVSPLIRQLVNLSKATQAFGMG CCEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELQQRIPVRKTSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL HHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCC QVYPDFSVELVSYPTALKIKTDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHV CCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEE DDDGPGIDELESMQVIKPFVRGQHSRGNSGHGMGLAIVDRIGYWMNAPLRIGRAPELGGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCC RMSLKFKAEI EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]