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The map label for this gene is ydcP [H]

Identifier: 126172981

GI number: 126172981

Start: 826640

End: 828556

Strand: Direct

Name: ydcP [H]

Synonym: Sbal_0734

Alternate gene names: 126172981

Gene position: 826640-828556 (Clockwise)

Preceding gene: 126172977

Following gene: 126172982

Centisome position: 16.12

GC content: 48.72

Gene sequence:

>1917_bases
ATGAGCCTGCCAGAGATATACACTCCCGAGAATCTTTCTCACGTCCATAACCGCCTTGAGTTATTGGCGCCTGCAAAAAA
TGCTGACTACGGTATCGAAGCCATACGCCATGGTGCCGATGCGGTATACATAGGGGGGCCTGCATTCGGTGCGCGGGCAA
CGGCAGGTAACAGTGTTGAAGATATCGCGCGACTCTGTACTTATGCTCATCAATATCATGCTCAGGTATTCGTCGCCCTC
AATACCATTTTGATGGATAACGAACTGGCCGACGCCGAAAAACTCATTTGGCAATTGTACGAAGCCGGTGCCGATGCGCT
GATTGTGCAGGACATGGGCGTATTGCAGCTCAATTTGCCGCCGATTGCCCTGCATGCCAGTACCCAAATGGATAACCGCA
GCCCAGAAAAAGTGGCGTTCTTAGAGCAAGTTGGTTTTTCTCAGGTGGTGCTCGCCCGCGAATTAGGCTTGAGCCAAATC
CGTGATGTGGCCGCGCATACTAATATGCAGCTCGAATTCTTTATCCACGGTGCTCTGTGTGTGGCTTACAGTGGTTTGTG
TAACTTGAGTCATTCCTTTAGTAACCGCAGTGCTAACCGCGGCGAATGCTCGCAAATGTGCCGTCTGCCGGGCAATCTTA
AAACCCGTCAAGGCGACGTGTTAGCGCAGAATGAACATTTATTGTCTTTAAAAGACAATAACCAAACCGAAAACCTTGAA
GCGCTCATCGATGCGGGCATTCGCTCGTTTAAGATTGAAGGTCGCTTAAAAGATTTAAGTTACGTTAAAAACGTCACCGC
GCATTATCGCCAAAAGCTGGATGCGATTATGGCACGTCGCCCTGAGTTTAAGGCTTCGTCCCACGGCCGCTGTGAACATT
CCTTTATCCCAGATCCTGAAAAGACCTTTAATCGTGGCAGCACAGATTACTTTGTTAACGAACGTAGCCAAGGCATTAAA
GATTTCCGCTCGCCAAAATACATAGGCGAAGAAGTCGGTAAAGTGGTCAGCATAGGCAAAGACTTTATCCAAGTGAGCTC
AACCCATGAGTTTAATAACGGCGATGGCTTAGCGTTCTTCCCTGCGAATTTTGCCATGGCAAAACAATCAGATGACAAAC
TGCAAGGTCTGCGGGTTAACCGCGCCGAAGGCTTAAAACTGCATATATTGCAGGTGCCAAAGGATTTAAAAGTCGGCATG
ACCTTATACCGTAACCATAACCAAGCCTTCGAAGCCCTGTTATCGAAAGAATCTTCTAAGCGGATTATCGGCGTCGATTT
ACGTTTGAGCGACACTCAAGACGGACTGGCGCTGACCTTGACCGATATCTATGGCCTAAGCGCCACAGTCAATTTAGTGG
TCGAGAAGACACCCGCGACAGATGTCGACAAGGCCTTACAAAATACCCGCACTCAGCTGGGTAAACTAGGTAGTACCGAT
TTTGTTGCCCGCAGTATCAGTATCGATACGGCGCAAGCCTGGTTCTTGCCTGCGTCTGTGCTCAATGGTCTGCGCCGTGA
TGGCGTTGCCGCCTTAGAGGCTGCCCGTGTACAAGGTTATGTGCGTCCACTGCCGTGGAAACATAATCAAGATGCAGTGT
ATCCCGTTAAGCATTTGAGTTACTTAGGTAACGTAGCCAACGAAAAGGCCAAGGATTTTTATCAACGTCACGGCGTGATT
GAGATCCAAGATACCTATGAGAAAAACGGCGTCACCGAAGACGTGCCATTGATGATCACTAAGCATTGTCTGCGGTTTAA
CTTCAATCTGTGTCCGAAGGAAGTACCAGGCATCAAGGCCGATCCTATGGTGCTTGAAATCGGTAACGATGTGCTCAAGT
TGGTATTCGACTGTCCTAAATGCGAAATGATGGTGGTCGGTGAAAACCGTCAAGTGCGAGGCCAGAAACACCTTTAA

Upstream 100 bases:

>100_bases
GTAAAGCGCATTAGTTGATGATTTGCTGATAGAGCTGGATTTGAGTTCTTGCTATAATTACGCTCTTTTTTGTTAACGAC
CCTGTTGAGCCTTTTAAGCC

Downstream 100 bases:

>100_bases
CACTTGTCATTAGGAGCATTGCCCAGTGCAATGCTCCTAACACCCATTTAGCTAACATCCGCGCCTACCTATCATTGATG
TTGTTCTCACCATAGCTACT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MSLPEIYTPENLSHVHNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTYAHQYHAQVFVAL
NTILMDNELADAEKLIWQLYEAGADALIVQDMGVLQLNLPPIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQI
RDVAAHTNMQLEFFIHGALCVAYSGLCNLSHSFSNRSANRGECSQMCRLPGNLKTRQGDVLAQNEHLLSLKDNNQTENLE
ALIDAGIRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFKASSHGRCEHSFIPDPEKTFNRGSTDYFVNERSQGIK
DFRSPKYIGEEVGKVVSIGKDFIQVSSTHEFNNGDGLAFFPANFAMAKQSDDKLQGLRVNRAEGLKLHILQVPKDLKVGM
TLYRNHNQAFEALLSKESSKRIIGVDLRLSDTQDGLALTLTDIYGLSATVNLVVEKTPATDVDKALQNTRTQLGKLGSTD
FVARSISIDTAQAWFLPASVLNGLRRDGVAALEAARVQGYVRPLPWKHNQDAVYPVKHLSYLGNVANEKAKDFYQRHGVI
EIQDTYEKNGVTEDVPLMITKHCLRFNFNLCPKEVPGIKADPMVLEIGNDVLKLVFDCPKCEMMVVGENRQVRGQKHL

Sequences:

>Translated_638_residues
MSLPEIYTPENLSHVHNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTYAHQYHAQVFVAL
NTILMDNELADAEKLIWQLYEAGADALIVQDMGVLQLNLPPIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQI
RDVAAHTNMQLEFFIHGALCVAYSGLCNLSHSFSNRSANRGECSQMCRLPGNLKTRQGDVLAQNEHLLSLKDNNQTENLE
ALIDAGIRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFKASSHGRCEHSFIPDPEKTFNRGSTDYFVNERSQGIK
DFRSPKYIGEEVGKVVSIGKDFIQVSSTHEFNNGDGLAFFPANFAMAKQSDDKLQGLRVNRAEGLKLHILQVPKDLKVGM
TLYRNHNQAFEALLSKESSKRIIGVDLRLSDTQDGLALTLTDIYGLSATVNLVVEKTPATDVDKALQNTRTQLGKLGSTD
FVARSISIDTAQAWFLPASVLNGLRRDGVAALEAARVQGYVRPLPWKHNQDAVYPVKHLSYLGNVANEKAKDFYQRHGVI
EIQDTYEKNGVTEDVPLMITKHCLRFNFNLCPKEVPGIKADPMVLEIGNDVLKLVFDCPKCEMMVVGENRQVRGQKHL
>Mature_637_residues
SLPEIYTPENLSHVHNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCTYAHQYHAQVFVALN
TILMDNELADAEKLIWQLYEAGADALIVQDMGVLQLNLPPIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQIR
DVAAHTNMQLEFFIHGALCVAYSGLCNLSHSFSNRSANRGECSQMCRLPGNLKTRQGDVLAQNEHLLSLKDNNQTENLEA
LIDAGIRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFKASSHGRCEHSFIPDPEKTFNRGSTDYFVNERSQGIKD
FRSPKYIGEEVGKVVSIGKDFIQVSSTHEFNNGDGLAFFPANFAMAKQSDDKLQGLRVNRAEGLKLHILQVPKDLKVGMT
LYRNHNQAFEALLSKESSKRIIGVDLRLSDTQDGLALTLTDIYGLSATVNLVVEKTPATDVDKALQNTRTQLGKLGSTDF
VARSISIDTAQAWFLPASVLNGLRRDGVAALEAARVQGYVRPLPWKHNQDAVYPVKHLSYLGNVANEKAKDFYQRHGVIE
IQDTYEKNGVTEDVPLMITKHCLRFNFNLCPKEVPGIKADPMVLEIGNDVLKLVFDCPKCEMMVVGENRQVRGQKHL

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=632, Percent_Identity=51.4240506329114, Blast_Score=606, Evalue=1e-174,
Organism=Escherichia coli, GI1788397, Length=451, Percent_Identity=26.3858093126386, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1789548, Length=293, Percent_Identity=31.0580204778157, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020988
- InterPro:   IPR001539 [H]

Pfam domain/function: PF12392 DUF3656; PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 70882; Mature: 70750

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPEIYTPENLSHVHNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVE
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCHH
DIARLCTYAHQYHAQVFVALNTILMDNELADAEKLIWQLYEAGADALIVQDMGVLQLNLP
HHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCC
PIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQIRDVAAHTNMQLEFFIHGALC
CEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEEHHHHH
VAYSGLCNLSHSFSNRSANRGECSQMCRLPGNLKTRQGDVLAQNEHLLSLKDNNQTENLE
HHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCHHHH
ALIDAGIRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFKASSHGRCEHSFIPDPE
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KTFNRGSTDYFVNERSQGIKDFRSPKYIGEEVGKVVSIGKDFIQVSSTHEFNNGDGLAFF
HHHCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEECCCCCCCCCCEEEEE
PANFAMAKQSDDKLQGLRVNRAEGLKLHILQVPKDLKVGMTLYRNHNQAFEALLSKESSK
CCCCEECCCCCCHHCCEEEECCCCCEEEEEECCCCHHHCHHHHHCCHHHHHHHHCCCCCC
RIIGVDLRLSDTQDGLALTLTDIYGLSATVNLVVEKTPATDVDKALQNTRTQLGKLGSTD
CEEEEEEEECCCCCCEEEEEEHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH
FVARSISIDTAQAWFLPASVLNGLRRDGVAALEAARVQGYVRPLPWKHNQDAVYPVKHLS
HHEEEEECCCHHHHEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YLGNVANEKAKDFYQRHGVIEIQDTYEKNGVTEDVPLMITKHCLRFNFNLCPKEVPGIKA
HHHHHHHHHHHHHHHHCCEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
DPMVLEIGNDVLKLVFDCPKCEMMVVGENRQVRGQKHL
CCEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SLPEIYTPENLSHVHNRLELLAPAKNADYGIEAIRHGADAVYIGGPAFGARATAGNSVE
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCHH
DIARLCTYAHQYHAQVFVALNTILMDNELADAEKLIWQLYEAGADALIVQDMGVLQLNLP
HHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCC
PIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQIRDVAAHTNMQLEFFIHGALC
CEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHCCCEEEEEEHHHHH
VAYSGLCNLSHSFSNRSANRGECSQMCRLPGNLKTRQGDVLAQNEHLLSLKDNNQTENLE
HHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCHHHH
ALIDAGIRSFKIEGRLKDLSYVKNVTAHYRQKLDAIMARRPEFKASSHGRCEHSFIPDPE
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
KTFNRGSTDYFVNERSQGIKDFRSPKYIGEEVGKVVSIGKDFIQVSSTHEFNNGDGLAFF
HHHCCCCCCEEECCHHHHHHHHCCCHHHHHHHHHHHHHCHHHHEECCCCCCCCCCEEEEE
PANFAMAKQSDDKLQGLRVNRAEGLKLHILQVPKDLKVGMTLYRNHNQAFEALLSKESSK
CCCCEECCCCCCHHCCEEEECCCCCEEEEEECCCCHHHCHHHHHCCHHHHHHHHCCCCCC
RIIGVDLRLSDTQDGLALTLTDIYGLSATVNLVVEKTPATDVDKALQNTRTQLGKLGSTD
CEEEEEEEECCCCCCEEEEEEHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCH
FVARSISIDTAQAWFLPASVLNGLRRDGVAALEAARVQGYVRPLPWKHNQDAVYPVKHLS
HHEEEEECCCHHHHEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YLGNVANEKAKDFYQRHGVIEIQDTYEKNGVTEDVPLMITKHCLRFNFNLCPKEVPGIKA
HHHHHHHHHHHHHHHHCCEEEEECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
DPMVLEIGNDVLKLVFDCPKCEMMVVGENRQVRGQKHL
CCEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]