| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126172952
Identifier: 126172952
GI number: 126172952
Start: 798122
End: 798994
Strand: Direct
Name: 126172952
Synonym: Sbal_0704
Alternate gene names: NA
Gene position: 798122-798994 (Clockwise)
Preceding gene: 126172951
Following gene: 126172953
Centisome position: 15.57
GC content: 47.31
Gene sequence:
>873_bases ATGTGGATCTTATTAACTTTGCTGGCGGCATTTATGCAGGCTTGGCGTAATGCGTTTCAAAGCCAGCTGAGTAAAGAGGT GAGTGTTGCGGGCGTGACCTTAGCGCGTTTTATTTGGGCTGGGCCCATTGCCGCCGTGTATCTGGTAGGTTTATATCTTT GGCAGGATGTCGGAGTCCCCGATTTTAGCGGGCGTTTCATCGGTTTTATCTTAGGTGCATCGGCGATGCAAATCCTCGCG ACGGGCTTGATGGTGAAACTGTTTAAGCAACAGAATTTTGCCATCGGGGCAGGGCTGGCTAAGAGTGAAGCTGTGGTTGC GGCGATATTAGGCACAGTGTTTTTTGGCACTCATTTATCACCATTAGGTTGGTCGGGTGTATTGCTGGGCGGTGTGGCGA TTTTTTTGATGAGTGCCAAGCAAGGTCTTCGAAGTCTATCGCTCAATACGGTATTGATTGGTTTAGCCTGTGGTACTTCG TTTGCGCTGACATCGCTTTGGGTGCGAGAGGCGAGTTTATGTTTGAATATCGGCTTCCCCCATAGCGCCGCTTGGGTGCT GTTATTCGTGATTAGTCTACAGACCTTAGTGTTAGTCAGTTATCTGTTACTTAAGGATAAATCCACACTGGCCGCGTTAT GGCAGCGACCTAAGCTTACCTTACTCACTAGTACCGCCAGTTGTTTAGGTTCTATCGGCTGGTTTAGTGCTATGTCGCTG CAGGCTGTGCCTTATGTAAAAACCTTAGGTCAAGTTGAAGTCTTCTTTATGATCCTGATTGCCACCTTTTGGTTGAAGGA AAAAGTGAAGATAAAAGATATGCTTGGATTAGTGCTTATTGCTATGGCCGCCATTTTGGTGATGTGGGAATAG
Upstream 100 bases:
>100_bases TTGCCATAACCCCATGGATATCTGAAACATTAATGTTTTATGATGAGGTTTGCCTAACTCTCGTCTTTATTGCCGACCTA ATTCTTTACGGAATACCTTC
Downstream 100 bases:
>100_bases ATTAAAACTCATTGATGTCATACTGGTTTTTTATACTAGAATAAAACTCTATTTAGCCAGTTTATATCAAGCTGATATGA ACTGAGATACAAACATATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MWILLTLLAAFMQAWRNAFQSQLSKEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGVPDFSGRFIGFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLMSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWQRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAMAAILVMWE
Sequences:
>Translated_290_residues MWILLTLLAAFMQAWRNAFQSQLSKEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGVPDFSGRFIGFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLMSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWQRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAMAAILVMWE >Mature_290_residues MWILLTLLAAFMQAWRNAFQSQLSKEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGVPDFSGRFIGFILGASAMQILA TGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLSPLGWSGVLLGGVAIFLMSAKQGLRSLSLNTVLIGLACGTS FALTSLWVREASLCLNIGFPHSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWQRPKLTLLTSTASCLGSIGWFSAMSL QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAMAAILVMWE
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31370; Mature: 31370
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWILLTLLAAFMQAWRNAFQSQLSKEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGVP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFSGRFIGFILGASAMQILATGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCCC PLGWSGVLLGGVAIFLMSAKQGLRSLSLNTVLIGLACGTSFALTSLWVREASLCLNIGFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCC HSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWQRPKLTLLTSTASCLGSIGWFSAMSL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAMAAILVMWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWILLTLLAAFMQAWRNAFQSQLSKEVSVAGVTLARFIWAGPIAAVYLVGLYLWQDVGVP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DFSGRFIGFILGASAMQILATGLMVKLFKQQNFAIGAGLAKSEAVVAAILGTVFFGTHLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCCC PLGWSGVLLGGVAIFLMSAKQGLRSLSLNTVLIGLACGTSFALTSLWVREASLCLNIGFP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCC HSAAWVLLFVISLQTLVLVSYLLLKDKSTLAALWQRPKLTLLTSTASCLGSIGWFSAMSL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH QAVPYVKTLGQVEVFFMILIATFWLKEKVKIKDMLGLVLIAMAAILVMWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA