| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is metE [H]
Identifier: 126172916
GI number: 126172916
Start: 757883
End: 760153
Strand: Direct
Name: metE [H]
Synonym: Sbal_0667
Alternate gene names: 126172916
Gene position: 757883-760153 (Clockwise)
Preceding gene: 126172913
Following gene: 126172917
Centisome position: 14.78
GC content: 49.41
Gene sequence:
>2271_bases ATGCAATTAAATAGTCTTGGGTTTCCCCGCATCGGGCGTCGTCGTGAATTGAAATTTGCCTTAGAAAAATACTGGCGTGG TGAGATCACTCAAGCTGAACTGCGTGAAGTGGCGAGCGAACTGCGCCGTACCCATTGGCAGTGGCAAACCGCAGCGGGCA TCGAGCAAGTGCCCGTGGGGGATTTTGCCTTTTACGATCAAGTATTAACCTTGAGTGCGACCTTAAATGCCATCCCTGAT CGCCACCGCGGCGAAGGCGCTATCGATCTCGATACTCTATTCCGTGTTGCCCGCGGCAGAGCGCCAACGGGCCAAGATGC GCCAGCTTCTGAAATGACCAAGTATTTCAATACTAACTATCACTATCTGGTGCCAGAGCTGACGCAAAACCAAGATTTTT CGATTGCTTACGAGCAGTTTTTTGATGAAGTCAGCGAAGCGCAAGCGCTAGGCTATAAAGCCAAACCTGTTCTACTCGGC CCAGTCAGTTACTTGCACCTTGCTAAAACTGTGGGTCAAGAGTTCGATAAGTTAAGTTTATTACCTAATTTATTAACTGC TTATGCTGACATTTTGGCCCGTTTCGCCGCCCAAGGTGTGGAATGGGTACAGTTAGATGAGCCTGTGTTGGCATTAGAGT TAGACACGCATTGGCAAGCGGCGATGACTAAGACTTATCAAGCATTAAGCACTGCTAACGTTAAGGTTCTCTTAGCGAGT TATTATGGCGGTATTGCGCATCATCAAGCCTTCGTATCTGCCTTGCCTGTTGCTGGTTTGCACTTAGATTTAGTTACTGC GCCAGAACAACTGGCTGTGTTTGCGGATGCCCTTGGTCAAGATCAAATTCTGTCGGCGGGTGTGGTTAATGGTCGTAACG TGTGGGCGGCGGATATCGATTTGATTGCCGAGCGTATTGGCGCTGTGGCGGGTGATTTAGGCGATCGTTTGTGGATTGGC ACATCATGTTCATTACTGCATAGCCCAGTCGATTTAGATGTTGAAGTCAAACTATTACCTGTACTGCGTAAGCAGTTGGC CTTTGCTAAGCAAAAACTGTTGGAATTGAGCAAGGTTCGCCAATTATTGTTGGCGCCTAGCTCGGATGAAGCACAGAAAA TCAGTGCTTTTTGTATCGCTCGTCGCCAAGCAAAAGCGCAGGCTGCAGACAAGCAAGTAGTTGATCGCGTTTCGGCATTA ACCGCTGCAGATTATGAGCGGGCAAATGATTTCAGTGTGCGCCAAAGTGTGCAGCAGCGAAAATACCAATTACCTCTGTT GCCAACCACGACCATAGGTTCGTTCCCACAAACACCGGCAATTCGTGGACTACGCAGCCGCTGGCGCAAGGGTGAGCTTA ACGATGCGCAATATACAGAGCAGTTACAGCAAGTGACCCGCGATACTATCGATCGCCAATTAAAGCTGGGTATCGATGTG CTTGTGCACGGTGAAGCCGAACGTAACGACATGGTGGAGTACTTTGGCAAGCAGTTAGCTGGTGTTGGTTTTAGTAAAAA TGGCTGGGTGCAAAGCTATGGCTCACGCTGTGTTAAGCCCCCCTTGATTTACGGTGATGTGAGTCGTCCAAAAGCCATGA CAGTCGAGTGGGCAAAGTTTGCCCAGAGTCTCACCGACAAGCCCGTAAAAGGCATGTTGACGGGGCCAGTGACGATTTTG CACTGGTCATTCGCCCGTGAAGATATCAGCCGCGATGCGATTGCGACACAACTGGCGCTGGCTATCCGTGATGAAGTGGT CGATTTACAAAATGTGGGGATTGGCATTATTCAAATTGATGAGCCCGCCTTCCGTGAAGGTCTGCCATTGAAGCAAAGTG AGTGGCAAACCTATTTAGATTGGGCGGTGAATGCCTTTAAACTCAGCGCTGCTGGCGTGACTGATGAGACTCAAATCCAC ACTCACATGTGTTACAGCGAGTTTAACGACACGATTGGCGCGATTGCTGCCATGGATGCCGATGTGATCACAATCGAGAC TTCGCGTTCACGGATGGAGTTACTCAATGCCTTTGAAGATTTTGAATATCCAAATGAAATCGGCCCCGGTGTATATGACA TTCATTCACCAAACACCCCAAGTGTGGAGGCCATGGTGCACTTAATCGAGAAAGCCGCGCAGAAAGTACCCGTGCGTCAA CTGTGGGTCAACCCAGATTGTGGCCTAAAAACCCGTACTTGGGATGAAGTCGAACCTGCATTGAAAAACATGGTCGATGC TACCCGCGAACTGCGTCGCCGCCTTGGCTAA
Upstream 100 bases:
>100_bases GTTATTTATCAAGGCGGAAATGCTGAAAAGTGCCAAGAGAAAACAATCTGGTGGGTGCAAGTGCCGAATTTGGCTTATCT CAAATAAAGGAAGATAGGGT
Downstream 100 bases:
>100_bases TTGCATTCGGCTAAGCTGACCTCATTGAAAGCGGGTACACTAGGTCTCCGCTTTTTTGTAATGATTTGATGATATAAAAT TAGCTTAAACATGTTACTTA
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MQLNSLGFPRIGRRRELKFALEKYWRGEITQAELREVASELRRTHWQWQTAAGIEQVPVGDFAFYDQVLTLSATLNAIPD RHRGEGAIDLDTLFRVARGRAPTGQDAPASEMTKYFNTNYHYLVPELTQNQDFSIAYEQFFDEVSEAQALGYKAKPVLLG PVSYLHLAKTVGQEFDKLSLLPNLLTAYADILARFAAQGVEWVQLDEPVLALELDTHWQAAMTKTYQALSTANVKVLLAS YYGGIAHHQAFVSALPVAGLHLDLVTAPEQLAVFADALGQDQILSAGVVNGRNVWAADIDLIAERIGAVAGDLGDRLWIG TSCSLLHSPVDLDVEVKLLPVLRKQLAFAKQKLLELSKVRQLLLAPSSDEAQKISAFCIARRQAKAQAADKQVVDRVSAL TAADYERANDFSVRQSVQQRKYQLPLLPTTTIGSFPQTPAIRGLRSRWRKGELNDAQYTEQLQQVTRDTIDRQLKLGIDV LVHGEAERNDMVEYFGKQLAGVGFSKNGWVQSYGSRCVKPPLIYGDVSRPKAMTVEWAKFAQSLTDKPVKGMLTGPVTIL HWSFAREDISRDAIATQLALAIRDEVVDLQNVGIGIIQIDEPAFREGLPLKQSEWQTYLDWAVNAFKLSAAGVTDETQIH THMCYSEFNDTIGAIAAMDADVITIETSRSRMELLNAFEDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQ LWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRLG
Sequences:
>Translated_756_residues MQLNSLGFPRIGRRRELKFALEKYWRGEITQAELREVASELRRTHWQWQTAAGIEQVPVGDFAFYDQVLTLSATLNAIPD RHRGEGAIDLDTLFRVARGRAPTGQDAPASEMTKYFNTNYHYLVPELTQNQDFSIAYEQFFDEVSEAQALGYKAKPVLLG PVSYLHLAKTVGQEFDKLSLLPNLLTAYADILARFAAQGVEWVQLDEPVLALELDTHWQAAMTKTYQALSTANVKVLLAS YYGGIAHHQAFVSALPVAGLHLDLVTAPEQLAVFADALGQDQILSAGVVNGRNVWAADIDLIAERIGAVAGDLGDRLWIG TSCSLLHSPVDLDVEVKLLPVLRKQLAFAKQKLLELSKVRQLLLAPSSDEAQKISAFCIARRQAKAQAADKQVVDRVSAL TAADYERANDFSVRQSVQQRKYQLPLLPTTTIGSFPQTPAIRGLRSRWRKGELNDAQYTEQLQQVTRDTIDRQLKLGIDV LVHGEAERNDMVEYFGKQLAGVGFSKNGWVQSYGSRCVKPPLIYGDVSRPKAMTVEWAKFAQSLTDKPVKGMLTGPVTIL HWSFAREDISRDAIATQLALAIRDEVVDLQNVGIGIIQIDEPAFREGLPLKQSEWQTYLDWAVNAFKLSAAGVTDETQIH THMCYSEFNDTIGAIAAMDADVITIETSRSRMELLNAFEDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQ LWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRLG >Mature_756_residues MQLNSLGFPRIGRRRELKFALEKYWRGEITQAELREVASELRRTHWQWQTAAGIEQVPVGDFAFYDQVLTLSATLNAIPD RHRGEGAIDLDTLFRVARGRAPTGQDAPASEMTKYFNTNYHYLVPELTQNQDFSIAYEQFFDEVSEAQALGYKAKPVLLG PVSYLHLAKTVGQEFDKLSLLPNLLTAYADILARFAAQGVEWVQLDEPVLALELDTHWQAAMTKTYQALSTANVKVLLAS YYGGIAHHQAFVSALPVAGLHLDLVTAPEQLAVFADALGQDQILSAGVVNGRNVWAADIDLIAERIGAVAGDLGDRLWIG TSCSLLHSPVDLDVEVKLLPVLRKQLAFAKQKLLELSKVRQLLLAPSSDEAQKISAFCIARRQAKAQAADKQVVDRVSAL TAADYERANDFSVRQSVQQRKYQLPLLPTTTIGSFPQTPAIRGLRSRWRKGELNDAQYTEQLQQVTRDTIDRQLKLGIDV LVHGEAERNDMVEYFGKQLAGVGFSKNGWVQSYGSRCVKPPLIYGDVSRPKAMTVEWAKFAQSLTDKPVKGMLTGPVTIL HWSFAREDISRDAIATQLALAIRDEVVDLQNVGIGIIQIDEPAFREGLPLKQSEWQTYLDWAVNAFKLSAAGVTDETQIH THMCYSEFNDTIGAIAAMDADVITIETSRSRMELLNAFEDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQ LWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRLG
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=752, Percent_Identity=56.5159574468085, Blast_Score=863, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=762, Percent_Identity=44.6194225721785, Blast_Score=637, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 84296; Mature: 84296
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLNSLGFPRIGRRRELKFALEKYWRGEITQAELREVASELRRTHWQWQTAAGIEQVPVG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC DFAFYDQVLTLSATLNAIPDRHRGEGAIDLDTLFRVARGRAPTGQDAPASEMTKYFNTNY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC HYLVPELTQNQDFSIAYEQFFDEVSEAQALGYKAKPVLLGPVSYLHLAKTVGQEFDKLSL EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH LPNLLTAYADILARFAAQGVEWVQLDEPVLALELDTHWQAAMTKTYQALSTANVKVLLAS HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCHHEEHHH YYGGIAHHQAFVSALPVAGLHLDLVTAPEQLAVFADALGQDQILSAGVVNGRNVWAADID HHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHH LIAERIGAVAGDLGDRLWIGTSCSLLHSPVDLDVEVKLLPVLRKQLAFAKQKLLELSKVR HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH QLLLAPSSDEAQKISAFCIARRQAKAQAADKQVVDRVSALTAADYERANDFSVRQSVQQR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KYQLPLLPTTTIGSFPQTPAIRGLRSRWRKGELNDAQYTEQLQQVTRDTIDRQLKLGIDV HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE LVHGEAERNDMVEYFGKQLAGVGFSKNGWVQSYGSRCVKPPLIYGDVSRPKAMTVEWAKF EEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCHHHHHHHH AQSLTDKPVKGMLTGPVTILHWSFAREDISRDAIATQLALAIRDEVVDLQNVGIGIIQID HHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC EPAFREGLPLKQSEWQTYLDWAVNAFKLSAAGVTDETQIHTHMCYSEFNDTIGAIAAMDA CHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DVITIETSRSRMELLNAFEDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQ CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHH LWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRLG EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLNSLGFPRIGRRRELKFALEKYWRGEITQAELREVASELRRTHWQWQTAAGIEQVPVG CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC DFAFYDQVLTLSATLNAIPDRHRGEGAIDLDTLFRVARGRAPTGQDAPASEMTKYFNTNY HHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC HYLVPELTQNQDFSIAYEQFFDEVSEAQALGYKAKPVLLGPVSYLHLAKTVGQEFDKLSL EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH LPNLLTAYADILARFAAQGVEWVQLDEPVLALELDTHWQAAMTKTYQALSTANVKVLLAS HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCHHEEHHH YYGGIAHHQAFVSALPVAGLHLDLVTAPEQLAVFADALGQDQILSAGVVNGRNVWAADID HHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHH LIAERIGAVAGDLGDRLWIGTSCSLLHSPVDLDVEVKLLPVLRKQLAFAKQKLLELSKVR HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH QLLLAPSSDEAQKISAFCIARRQAKAQAADKQVVDRVSALTAADYERANDFSVRQSVQQR HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KYQLPLLPTTTIGSFPQTPAIRGLRSRWRKGELNDAQYTEQLQQVTRDTIDRQLKLGIDV HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEE LVHGEAERNDMVEYFGKQLAGVGFSKNGWVQSYGSRCVKPPLIYGDVSRPKAMTVEWAKF EEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCCHHHHHHHH AQSLTDKPVKGMLTGPVTILHWSFAREDISRDAIATQLALAIRDEVVDLQNVGIGIIQID HHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC EPAFREGLPLKQSEWQTYLDWAVNAFKLSAAGVTDETQIHTHMCYSEFNDTIGAIAAMDA CHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC DVITIETSRSRMELLNAFEDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQ CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHH LWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRLG EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]