| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is mutL
Identifier: 126172805
GI number: 126172805
Start: 628920
End: 630836
Strand: Direct
Name: mutL
Synonym: Sbal_0556
Alternate gene names: 126172805
Gene position: 628920-630836 (Clockwise)
Preceding gene: 126172804
Following gene: 126172806
Centisome position: 12.27
GC content: 48.2
Gene sequence:
>1917_bases ATGATGGGCATTCAGATCCTGCCACCGCAATTAGCCAACCAAATTGCGGCGGGGGAAGTGGTTGAGAGACCCGCTTCCGT AGTCAAAGAATTGGTCGAGAATAGTCTCGACGCAGGAGCGAGCCGAGTCGATATTGAAATCGACAAAGGCGGTAGCAAGC TGATTAAAATTCGCGATAACGGATCTGGTATACCCAAAGATGAACTCGCGCTGGCCTTATCGCGCCATGCGACCTCAAAG TTACACACCTTAGACGATCTCGAAGCGATCCTCAGTTTTGGTTTTCGCGGTGAAGCGTTAGCGAGTATCAGCTCAGTCTC ACGCTTAACCTTAACCTCGCGCACTGCTGATCAAACCGAAGCATGGCAAGCCCATGCTGAAGGTGCCGACATGGCGGTTA AAGTCATGCCCGCCGCGCATCCTGTTGGTTCTACGATTGAAGTGGTGGATTTATTCTTCAATACGCCAGCTCGCAGACGC TTTTTAAAGAGCGATAAAACCGAATTTACCCATATCGATGAATGGTTAAAGCGCATTGCATTAGTGCGCGGTGATATCCA TTTCACACTGACCCATAACGGCAAGATGGTACGCAATTATCGTCCCGCCATGAATGAAGCCCAGTATTTACAACGTTTGA CCCAAGTGTGTGGCCGTCCATTTGCCGAGCAAGCGCTTAAGATTGAATGCCAGCATGATGATTTACGCCTAAGTGGCTAT TTGCAGTCACCTTGGTCACCCGTTATCAGCGATACCCATTACTTTTATGTCAACGGACGCCTTATCCGTGACCGCTTAGT CAATCACGCGGTGCGCCAAGCTTTTGCCCAAAAAGCGGAACTGGAGCAACCCGGCTATGTGTTGATGTTGGATATCGATC CCCATCAAGTGGATGTTAACGTGCATCCCGCTAAGCATGAGGTGCGATTCCATCAGAGTCGCTATGTGCATGATTATATT CTGCAAGCATTGCAATCGGCGCTGGAAGAAGCAGGGGAACTCAACTTCGTTCACTCAAGCTCTTTGGATGAAGTTGAAGA TGTGTTTGTGGATGCCCCGACAAGCGCCACTGAAATCTCAGCCCCTTTTGTACTTGGTGCTGATTCAGCTCAAGTTAATG TGCCAGCTGATACACTTGAGTCTGCTCAACCGTTAGTTGCCTCTGCCGTTCAAGTAAAATCTGCCGGCGCAGGACGAGAA GGCACCAGTTTTGGCACTCAAACGAATGCCTTTGGCAGCATGGCCACGCCAAGGGACAATAGTCGCGGCAGTTATTCTGC TGGTGAATCTCGGCAACGAACTGAATTACCGTCAAAAGCGGCAATTGCAAGTTATGGTGCTTTATTGCAAACACCTTCTT ACAGTGTAAAAGATCAAGATTATCAGCCATCTTTACCTATGCCTGCTATTTTAGATGGCCAATATTGGGTAATGGCGACG GCGGATAAACTGAGTCTATTGCCAATAAAATCAGTAGCATTGGCGACGCGCTGCCAAGAGATTGAGGCTAAGCTAGCGAC CGGATTAATTGGGCAGCCTTTATTGATGCCAGTGTCTGTCGCGGCCGATGCAGATTGGCAGGCTGTGCTCGATGAACATG ACACGCTGATCCGCCAGTTAGGTTTAGAACTAACAATTCGTTACCAGCAGTTGATTATTAAAAAAGTGCCCCCATATATC AGAGAGAGCCAGTTAGCAAAAGTGATCCCTGAGTGGTTACAATCGCTGCGTTTTGAAACACCTGCGCCAAGCGCATTGGC ATTTTGGTTGGCAAAACACAGTTTAACGGGATTCGTTTCGGCACCAGAAATCTGGGCAGCATTTTCGCAGTTAGCTGAAG AGAAAAAACAGCTTATTGCCAACAAAGCAATATTACTACCTTGGCAATCGTGGCTAGAAGAGCAAGCAAGTGAATAA
Upstream 100 bases:
>100_bases CGTGTGCATATGTCTAGCATCAAACAAGCGAATGGGATGAAGTCCGATGTAGTGCAGTTAGGGCAAACATTAGTCATACC CCAGAGTTAAATAGGAAAGC
Downstream 100 bases:
>100_bases AGAATTACAGCCTAAAGTGATATTTTTGATGGGGCCAACGGCCTCAGGCAAAACTGCTTTAGCATTAGAATTGGCCGAAA AGCATAACTGTGAAATCATT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GTSFGTQTNAFGSMATPRDNSRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE
Sequences:
>Translated_638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GTSFGTQTNAFGSMATPRDNSRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE >Mature_638_residues MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNGSGIPKDELALALSRHATSK LHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEAWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRR FLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGY LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYI LQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEISAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGRE GTSFGTQTNAFGSMATPRDNSRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELTIRYQQLIIKKVPPYI RESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVSAPEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=328, Percent_Identity=35.0609756097561, Blast_Score=210, Evalue=4e-54, Organism=Homo sapiens, GI4505911, Length=325, Percent_Identity=27.3846153846154, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI189458898, Length=317, Percent_Identity=27.7602523659306, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI189458896, Length=317, Percent_Identity=27.1293375394322, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI4505913, Length=340, Percent_Identity=26.7647058823529, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI310128478, Length=340, Percent_Identity=26.7647058823529, Blast_Score=126, Evalue=8e-29, Organism=Homo sapiens, GI263191589, Length=234, Percent_Identity=30.3418803418803, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI91992160, Length=264, Percent_Identity=26.5151515151515, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI91992162, Length=264, Percent_Identity=26.5151515151515, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI310128480, Length=302, Percent_Identity=23.841059602649, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790612, Length=613, Percent_Identity=47.1451876019576, Blast_Score=491, Evalue=1e-140, Organism=Caenorhabditis elegans, GI71991825, Length=322, Percent_Identity=34.7826086956522, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17562796, Length=434, Percent_Identity=24.1935483870968, Blast_Score=123, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=341, Percent_Identity=35.4838709677419, Blast_Score=187, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6324247, Length=350, Percent_Identity=27.1428571428571, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6325093, Length=357, Percent_Identity=26.3305322128852, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323063, Length=361, Percent_Identity=25.4847645429363, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI17136968, Length=337, Percent_Identity=32.6409495548961, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17136970, Length=362, Percent_Identity=25.6906077348066, Blast_Score=112, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_SHEB5 (A3D022)
Other databases:
- EMBL: CP000563 - RefSeq: YP_001048954.1 - ProteinModelPortal: A3D022 - STRING: A3D022 - GeneID: 4844944 - GenomeReviews: CP000563_GR - KEGG: sbl:Sbal_0556 - NMPDR: fig|325240.3.peg.3195 - eggNOG: COG0323 - HOGENOM: HBG520262 - OMA: FTHIDEW - PhylomeDB: A3D022 - ProtClustDB: PRK00095 - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 70305; Mature: 70305
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDN CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECC GSGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCHHH AWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIA HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH LVRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGY HHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHEEEEECCCCEEEEEE LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVN ECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEIS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCC APFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGTSFGTQTNAFGSMATPRDN CCEEEECCCCEEECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQL CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHC GLELTIRYQQLIIKKVPPYIRESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVS CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE CHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCC >Mature Secondary Structure MMGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDN CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECC GSGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCHHH AWQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIA HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH LVRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGY HHCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHEEEEECCCCEEEEEE LQSPWSPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQKAELEQPGYVLMLDIDPHQVDVN ECCCCCCCCCCCEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE VHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEIS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCC APFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGTSFGTQTNAFGSMATPRDN CCEEEECCCCEEECCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMAT CCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEE ADKLSLLPIKSVALATRCQEIEAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQL CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHC GLELTIRYQQLIIKKVPPYIRESQLAKVIPEWLQSLRFETPAPSALAFWLAKHSLTGFVS CCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC APEIWAAFSQLAEEKKQLIANKAILLPWQSWLEEQASE CHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA