Click here to switch to the map view.

The map label for this gene is yjeF [H]

Identifier: 126172802

GI number: 126172802

Start: 625434

End: 626918

Strand: Direct

Name: yjeF [H]

Synonym: Sbal_0553

Alternate gene names: 126172802

Gene position: 625434-626918 (Clockwise)

Preceding gene: 126172801

Following gene: 126172803

Centisome position: 12.2

GC content: 51.58

Gene sequence:

>1485_bases
ATGGCACAAGATCTATCGCAATTCCCCAAGGCCTTATTTACCCAAGCACAAGTTCGCCAAGCTGAACTGAGTGCTGTGTC
ACAGGGAGCCTCTAGCCTCTATGAATTGGTCGAGCGTGCTGGCGCGGCGGCTTTTGAATGTTTAACAAAACATAACCCTA
ATGCCTCTTCTGTGTTTTTCCTCGCTGGCAGCGGTAACAATGGTGCCGATGCCTTAGTGTGCGCCCGTCTAGCCCGTGCA
AGTGGTATGGCCGTTTCAGTGATGATGACGTCAGTGGCAGGCACGCCTGAGTGTCAGCAAGCATTGGCCCATTATCTTAA
AGACGGCGGAGAGTTACTGCCGAAAGCCGTTGCGCCTATTCTTGCGGCCAAGATCATCGTCGATGGTTTACTCGGCACAG
GTGTGCGAGATGCTGTGCGCGACGATATGGCTGAGTATATTTGCGCCATCAATGACAATGCAGCTTGGGTATTGAGCCTT
GATTTACCGTCTGGAGTGATTGCCGATACCGGCGCTGTGGCGGGTGTTGCTGTGATGGCGGATGTCACCTTGTGTTTTGG
TGGCTGGAAGCAAGGTTTGTTAACGGGTAAGGCGCGGCATTACAGCGGCGAACTTGAATTTGCCGCTTTAGGATTAACAC
CTTTCTTCGCTGAAGCGAGTGCACAAAGAGTCGGAAAAGAGACGCTTAAGGATTATTTTGCCGCCAGAGCGCGCGATAGC
CATAAAGGGCAGTCAGGTAAGGCCACTGTTATCGGCGGTGATATGGGCATGGCTGGCGCCGTGCGACTGGCAAGTGAGGC
ATGTTTGCGTGCCGGTGCAGGATTAGTCACAGTGATCAGTCGACCTGATCATCAATTGACGGTGAATGTCTCTCGTCCGG
AATTGATGTTCTGGGGTTGTGACTTAGTCGATATGGAAGTGTATCTGCGCCTTGGTTGGGCGCAGGTTATCGTACTTGGC
CCTGGTTTAGGTAAGCATGACTGGGGCTATAACTTGTTTAAAGCCGTGGGCTTAAGTGATAAACCCTGTGTTTTGGATGC
CGATGCCTTAAATCTATTGAGCAATGAACCGCGCCGGCAAACCAATTGGGTGCTAACACCGCATCCGGGTGAGGCTGCGC
GTTTACTCGGCTGCTCTGTGGCAGAAATTGAACAGGATAGGTTTGCGGCTGTACGGGCTATACAGCAAAAGTACGGCGGT
GTTGTGTTGCTAAAAGGCGCGGGAACGGTCATTTTTGATGGCAAACAAATGATTGTTGCACCTGTCGGTAATCCTGGGCT
TGCCAGTGGTGGGTGTGGCGATGTGTTATCTGGTATTATAGGCGCGCTCATGGCTCAAGGAATGGATAACATGCAGGCGA
CTGTGCTGGGTGTTGTTGTACATGGTTGCGCCGCCGATCTTGCGGCAATACAGGGAGAACGTGGCATGTTAGCGAGCGAT
TTAATGCCTTTTATTCGCCAATTAGTGAATAGTGATTTACTCTAG

Upstream 100 bases:

>100_bases
TTGGCTGATTTTATTATCGGCCTTGCTCAATGCTGCCAAGACTCCTATGGTGAGGTAACTCATTGTGGAATGAAGTCGTT
GGCGTCTAAGGAGATCCTTC

Downstream 100 bases:

>100_bases
GCGGTATGTGAGACTCAAGCGGAGCTGGACTTTGTTCTGTGCCCTGTGCCTTTTTAGGGTTGAGTCGCTTCTCCATTAAT
AACAGCAGTGATATAAGCGG

Product: carbohydrate kinase, YjeF related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MAQDLSQFPKALFTQAQVRQAELSAVSQGASSLYELVERAGAAAFECLTKHNPNASSVFFLAGSGNNGADALVCARLARA
SGMAVSVMMTSVAGTPECQQALAHYLKDGGELLPKAVAPILAAKIIVDGLLGTGVRDAVRDDMAEYICAINDNAAWVLSL
DLPSGVIADTGAVAGVAVMADVTLCFGGWKQGLLTGKARHYSGELEFAALGLTPFFAEASAQRVGKETLKDYFAARARDS
HKGQSGKATVIGGDMGMAGAVRLASEACLRAGAGLVTVISRPDHQLTVNVSRPELMFWGCDLVDMEVYLRLGWAQVIVLG
PGLGKHDWGYNLFKAVGLSDKPCVLDADALNLLSNEPRRQTNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRAIQQKYGG
VVLLKGAGTVIFDGKQMIVAPVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVLGVVVHGCAADLAAIQGERGMLASD
LMPFIRQLVNSDLL

Sequences:

>Translated_494_residues
MAQDLSQFPKALFTQAQVRQAELSAVSQGASSLYELVERAGAAAFECLTKHNPNASSVFFLAGSGNNGADALVCARLARA
SGMAVSVMMTSVAGTPECQQALAHYLKDGGELLPKAVAPILAAKIIVDGLLGTGVRDAVRDDMAEYICAINDNAAWVLSL
DLPSGVIADTGAVAGVAVMADVTLCFGGWKQGLLTGKARHYSGELEFAALGLTPFFAEASAQRVGKETLKDYFAARARDS
HKGQSGKATVIGGDMGMAGAVRLASEACLRAGAGLVTVISRPDHQLTVNVSRPELMFWGCDLVDMEVYLRLGWAQVIVLG
PGLGKHDWGYNLFKAVGLSDKPCVLDADALNLLSNEPRRQTNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRAIQQKYGG
VVLLKGAGTVIFDGKQMIVAPVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVLGVVVHGCAADLAAIQGERGMLASD
LMPFIRQLVNSDLL
>Mature_493_residues
AQDLSQFPKALFTQAQVRQAELSAVSQGASSLYELVERAGAAAFECLTKHNPNASSVFFLAGSGNNGADALVCARLARAS
GMAVSVMMTSVAGTPECQQALAHYLKDGGELLPKAVAPILAAKIIVDGLLGTGVRDAVRDDMAEYICAINDNAAWVLSLD
LPSGVIADTGAVAGVAVMADVTLCFGGWKQGLLTGKARHYSGELEFAALGLTPFFAEASAQRVGKETLKDYFAARARDSH
KGQSGKATVIGGDMGMAGAVRLASEACLRAGAGLVTVISRPDHQLTVNVSRPELMFWGCDLVDMEVYLRLGWAQVIVLGP
GLGKHDWGYNLFKAVGLSDKPCVLDADALNLLSNEPRRQTNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRAIQQKYGGV
VLLKGAGTVIFDGKQMIVAPVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVLGVVVHGCAADLAAIQGERGMLASDL
MPFIRQLVNSDLL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=233, Percent_Identity=28.3261802575107, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1790609, Length=500, Percent_Identity=44.4, Blast_Score=378, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17554656, Length=228, Percent_Identity=29.3859649122807, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51555; Mature: 51424

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDLSQFPKALFTQAQVRQAELSAVSQGASSLYELVERAGAAAFECLTKHNPNASSVFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEE
LAGSGNNGADALVCARLARASGMAVSVMMTSVAGTPECQQALAHYLKDGGELLPKAVAPI
EEECCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LAAKIIVDGLLGTGVRDAVRDDMAEYICAINDNAAWVLSLDLPSGVIADTGAVAGVAVMA
HHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCEECCCHHHHHHHHH
DVTLCFGGWKQGLLTGKARHYSGELEFAALGLTPFFAEASAQRVGKETLKDYFAARARDS
HHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
HKGQSGKATVIGGDMGMAGAVRLASEACLRAGAGLVTVISRPDHQLTVNVSRPELMFWGC
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEECC
DLVDMEVYLRLGWAQVIVLGPGLGKHDWGYNLFKAVGLSDKPCVLDADALNLLSNEPRRQ
CEEHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEECHHHHHHHCCCCCCC
TNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRAIQQKYGGVVLLKGAGTVIFDGKQMIVA
CCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEEEE
PVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVLGVVVHGCAADLAAIQGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LMPFIRQLVNSDLL
HHHHHHHHHCCCCC
>Mature Secondary Structure 
AQDLSQFPKALFTQAQVRQAELSAVSQGASSLYELVERAGAAAFECLTKHNPNASSVFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEE
LAGSGNNGADALVCARLARASGMAVSVMMTSVAGTPECQQALAHYLKDGGELLPKAVAPI
EEECCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
LAAKIIVDGLLGTGVRDAVRDDMAEYICAINDNAAWVLSLDLPSGVIADTGAVAGVAVMA
HHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCEECCCHHHHHHHHH
DVTLCFGGWKQGLLTGKARHYSGELEFAALGLTPFFAEASAQRVGKETLKDYFAARARDS
HHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
HKGQSGKATVIGGDMGMAGAVRLASEACLRAGAGLVTVISRPDHQLTVNVSRPELMFWGC
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEEECC
DLVDMEVYLRLGWAQVIVLGPGLGKHDWGYNLFKAVGLSDKPCVLDADALNLLSNEPRRQ
CEEHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEECHHHHHHHCCCCCCC
TNWVLTPHPGEAARLLGCSVAEIEQDRFAAVRAIQQKYGGVVLLKGAGTVIFDGKQMIVA
CCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCEEEEE
PVGNPGLASGGCGDVLSGIIGALMAQGMDNMQATVLGVVVHGCAADLAAIQGERGMLASD
ECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LMPFIRQLVNSDLL
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]