Definition Staphylothermus marinus F1 chromosome, complete genome.
Accession NC_009033
Length 1,570,485

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 126466276

GI number:

Start: 1346546

End: 1347808

Strand: Direct

Name: Not Available

Synonym: Smar_1386

Alternate gene names: NA

Gene position: NA

Preceding gene: 126466275

Following gene: 126466277

Centisome position: NA

GC content: NA

Gene sequence:

>1263_bases
ATGAGGACCACATATTTTATAAGAGTACTTATGTGGAAAGAACTCACAGACCTAATTAGGGATAGGAAAACATTGTTTAC
AAGCATACTTCTACCATTAATAATGCTTCCCCTAATCGGATTACTAGGCGTAGCACTAGTTACACAACAACCAGTTCTAA
TAGCAATAATTGATCTTGATAATTCGAGTTATCATAATGACTACTTAAATATAACATATAATTCATCATGGGTCGTCTCT
AATCTAACCAATGTCTTATCTCGTTATGGATACAACTATACTATTTCCAGTAATGAAAGCATAGTTAAGAATCCAAAAAT
AGACTTAGCAGTTGTTATACCGGAGGGTTTCGCTAAAAACTCCACATTACTAAATACTACTGCTAGAATAATTATTTATA
GGAAAGCAGGTGTTCAAGCAGCTGAGAGAGCTGAAGCAACTGTTAATGGTGTCATATATTATTTATCCATAAGGTTATCT
GATGAAAAGATCAATTCATTGTCTAGAATACTAAATATTACAATTGTACCACAAGCTCTTAGAAACCCTATACAAACCAG
GACTGAAGTTGTCACAATAACCGGTGTTCCAGCACAACCAGGATTCGAATTAAAAGCTACCTTTGCAAGAATACTTGTTT
TAGCCCTTAGCTTCGTGGTGACTCCAGCTGCATCATACGTTATAGATGGTATAGTTGGTGAGAGGGAGAGAAAAACCATG
GAACTACTTATATCGAGCCCTGCCCCCCTTAATTCAATTATTTATTCTAAAATGATTGCTGCTACAATTCTTGGGTTAAT
AACGGCTGTTGCTGATGCTTTGGGATTAGTAGCTTATATGTTCTTATTGAGTATTGCTTCAGGAGTTGGTCTTGGCTTAA
TAGTTGATCCTATGCTTTTACTAATACATTCCATAACGGCTTTCTTCACAATATTAGCAACTATAACTATAGCATTACCC
TTCATTACTAGAACCAAGGGTATACGGAGTGCATCAAATATTGCTGGAATAGTGACAACTATTGGGATAGTATTCTTCTT
TACAGGCTTCTTCGTAGACTATATAAGGCTTCCTTCAGAGATACTTTATCCATTATATATAGTTCCATATGTTCATAGCA
TACTAGTTATACAATCATATATGCTCGGATATGTTTTGAGATCAATTATTCATATAAGTGTATTAGCAATTGTTAGCATA
GGATTACTAGTATTAGCTACAAAAACGATCAATACAGAAAAACTATTAATCGCTCAGTCCTAG

Upstream 100 bases:

>100_bases
GCAAAATATTTGTTGAAGGAACACCGAAGGAGATAAAAGATCTATATGGTGCTGATAACTTAGAAGAAGCATTCGTAAAA
GCAGTAGAGGAAACCAGGAA

Downstream 100 bases:

>100_bases
GATAAATAAGAAGATGATGAGCCCAGGCGAAGCAGAGCTTTTGAGGCTATGACGTATTCAGCCTTAACTGATCATACCTA
CACATAAGAATAAATTGATC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>420_residues
MRTTYFIRVLMWKELTDLIRDRKTLFTSILLPLIMLPLIGLLGVALVTQQPVLIAIIDLDNSSYHNDYLNITYNSSWVVS
NLTNVLSRYGYNYTISSNESIVKNPKIDLAVVIPEGFAKNSTLLNTTARIIIYRKAGVQAAERAEATVNGVIYYLSIRLS
DEKINSLSRILNITIVPQALRNPIQTRTEVVTITGVPAQPGFELKATFARILVLALSFVVTPAASYVIDGIVGERERKTM
ELLISSPAPLNSIIYSKMIAATILGLITAVADALGLVAYMFLLSIASGVGLGLIVDPMLLLIHSITAFFTILATITIALP
FITRTKGIRSASNIAGIVTTIGIVFFFTGFFVDYIRLPSEILYPLYIVPYVHSILVIQSYMLGYVLRSIIHISVLAIVSI
GLLVLATKTINTEKLLIAQS

Sequences:
NA

Specific function: NA

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA