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The map label for this gene is 125625295

Identifier: 125625295

GI number: 125625295

Start: 2497182

End: 2497655

Strand: Reverse

Name: 125625295

Synonym: llmg_2542

Alternate gene names: NA

Gene position: 2497655-2497182 (Counterclockwise)

Preceding gene: 125625298

Following gene: 125625293

Centisome position: 98.74

GC content: 33.97

Gene sequence:

>474_bases
ATGTTGTGTTTAGAGAAATATACAATCAATGAATTGCCATTGACAGAAGTTTGCAAAAAAGCCGGGGTGAGTCGGATGAC
TTTCTATCGGCACTTCAAAAATAAGGAAGAAGTCGTGTTAGAGTATTTTGAGCTAATCTATGATAAATTTCTTAAAGGAC
TTTTGGAGCTAGAAAGTATTAACTCACTTATTTTAAGTGAGAAGTTGGTGGGACTATTTGTTGAGCAAGAAGAAGAAATA
GAAAAAGCTGTCAAGGGGAATTATTATTCGCTGATTTTTCAGGTATTTGCTCAAAAGATGACTATTTTTTATAATGAAAC
AACGACTTGGGCTGATTATCTAGGGACAAAGCAAAAATTTTGGAACGATTTTATGGCTGCTGGTTTATTTTATGTTTTAG
GAAATTGGGTGAAAAATGGCTGTCAAGACTCTTATGATGAAGTGGTGAAGATGGTTGTAGAATTCCATGAATAA

Upstream 100 bases:

>100_bases
GACGATTTGTCTTTAAAAGTGACAACAAAATGAAAGTGTAACAGAAATGAAGCGAAAAGAGCAATATCAAGATTTTCATG
ACTTTATTATTGAAGGAACG

Downstream 100 bases:

>100_bases
GTGAACAGATAAAAAGGCTCAAGTTATTTTGAGCCTTTCTTTTAGCCAATAAATTTTTTCCCTTGTTTATTAAGAATCAC
TTTCGTAATTTCAATGACAA

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLCLEKYTINELPLTEVCKKAGVSRMTFYRHFKNKEEVVLEYFELIYDKFLKGLLELESINSLILSEKLVGLFVEQEEEI
EKAVKGNYYSLIFQVFAQKMTIFYNETTTWADYLGTKQKFWNDFMAAGLFYVLGNWVKNGCQDSYDEVVKMVVEFHE

Sequences:

>Translated_157_residues
MLCLEKYTINELPLTEVCKKAGVSRMTFYRHFKNKEEVVLEYFELIYDKFLKGLLELESINSLILSEKLVGLFVEQEEEI
EKAVKGNYYSLIFQVFAQKMTIFYNETTTWADYLGTKQKFWNDFMAAGLFYVLGNWVKNGCQDSYDEVVKMVVEFHE
>Mature_157_residues
MLCLEKYTINELPLTEVCKKAGVSRMTFYRHFKNKEEVVLEYFELIYDKFLKGLLELESINSLILSEKLVGLFVEQEEEI
EKAVKGNYYSLIFQVFAQKMTIFYNETTTWADYLGTKQKFWNDFMAAGLFYVLGNWVKNGCQDSYDEVVKMVVEFHE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18560; Mature: 18560

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCLEKYTINELPLTEVCKKAGVSRMTFYRHFKNKEEVVLEYFELIYDKFLKGLLELESI
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLILSEKLVGLFVEQEEEIEKAVKGNYYSLIFQVFAQKMTIFYNETTTWADYLGTKQKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
WNDFMAAGLFYVLGNWVKNGCQDSYDEVVKMVVEFHE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLCLEKYTINELPLTEVCKKAGVSRMTFYRHFKNKEEVVLEYFELIYDKFLKGLLELESI
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLILSEKLVGLFVEQEEEIEKAVKGNYYSLIFQVFAQKMTIFYNETTTWADYLGTKQKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
WNDFMAAGLFYVLGNWVKNGCQDSYDEVVKMVVEFHE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA