| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is usp45
Identifier: 125625261
GI number: 125625261
Start: 2462440
End: 2463825
Strand: Reverse
Name: usp45
Synonym: llmg_2507
Alternate gene names: 125625261
Gene position: 2463825-2462440 (Counterclockwise)
Preceding gene: 125625262
Following gene: 125625260
Centisome position: 97.4
GC content: 39.54
Gene sequence:
>1386_bases ATGAAAAAAAAGATTATCTCAGCTATTTTAATGTCTACAGTGATACTTTCTGCTGCAGCCCCGTTGTCAGGTGTTTACGC TGACACAAACTCAGATATTGCTAAACAAGATGCGACAATTTCAAGCGCGCAATCTGCTAAAGCACAAGCACAAGCACAAG TTGATAGCTTGCAATCAAAAGTTGACAGCTTACAACAAAAGCAAACAAGTACTAAAGCACAAATCGCTAAAATCGAAAGC GAAGCTAAAGCACTTAATGCTCAAATTGCTACTTTGAACGAAAGTATCAAAGAACGTACAAAGACATTGGAAGCTCAAGC ACGTAGTGCTCAAGTTAACAGCTCAGCAACAAATTATATGGATGCTGTTGTTAATTCAAAATCTTTGACAGATGTTATTC AAAAAGTAACAGCTATTGCTACTGTTTCTAGTGCCAACAAACAAATGTTGGAACAACAAGAAAAAGAGCAAAAAGAGCTT AGCCAAAAGTCAGAAACTGTTAAAAAGAACTACAACCAGTTCGTTTCTCTTTCACAAAGTTTGGATTCTCAAGCTCAAGA ATTGACTTCACAACAAGCTGAACTCAAAGTTGCGACTTTGAACTATCAAGCAACAATTGCAACTGCGCAAGATAAAAAAC AAGCTTTATTAGATGAAAAAGCAGCTGCAGAAAAAGCAGCTCAAGAAGCAGCTAAAAAACAAGCGGCTTATGAAGCTCAA CAAAAAGAAGCAGCACAAGCACAAGCAGCTTCAACAGCAGCAACTGCTAAAGCTGTAGAAGCAGCAACTTCATCAGCTTC TGCTTCATCTAGTCAAGCTCCACAAGTAAGTACAAGCACTGATAATACAACATCAAATGCTAGTGCCTCAAACAGTTCTA ATAGTTCATCAAACTCAAGTTCAAGTTCTAGCAGTTCATCAAGCTCAAGCTCAAGCTCAAGTAATTCTAATGCTGGTGGG AATACAAATTCAGGCACTAGTACTGGAAATACTGGAGGAACAACTACTGGTGGTAGCGGTATAAATAGTTCACCAATTGG AAATCCTTATGCTGGTGGTGGATGTACTGACTATGTATGGCAATACTTTGCTGCACAAGGAATTTATATCAGAAATATCA TGCCTGGTAATGGTGGACAATGGGCTTCTAATGGACCTGCCCAAGGCGTGCTCCATGTTGTAGGAGCTGCTCCTGGTGTT ATCGCATCAAGCTTCTCAGCTGATTTTGTTGGATATGCAAACTCACCTTACGGTCACGTAGCTATTGTAAAATCAGTTAA TTCAGATGGTACAATTACTATCAAAGAAGGCGGATATGGTACAACTTGGTGGGGACATGAACGTACTGTAAGTGCGTCTG GTGTTACTTTCTTGATGCCAAACTAG
Upstream 100 bases:
>100_bases GTGTTTTGTAATCATAAAGAAATATTAAGGTGGGGTAGGAATAGTATAATATGTTTATTCAACCGAACTTAATGGGAGGA AAAATTAAAAAAGAACAGTT
Downstream 100 bases:
>100_bases AAAAAAGTCTTAATAAATAAAAAATAGTGGTTTGATAGTGGGGAATAATTTTCCTTCTGTCAAATCATTTTTTATTATTG TGGTATAATAATAAGGAAAA
Product: secreted 45 kDa protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSKVDSLQQKQTSTKAQIAKIES EAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYMDAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKEL SQKSETVKKNYNQFVSLSQSLDSQAQELTSQQAELKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQ QKEAAQAQAASTAATAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSSSSSSSSSSSSSSSSNSNAGG NTNSGTSTGNTGGTTTGGSGINSSPIGNPYAGGGCTDYVWQYFAAQGIYIRNIMPGNGGQWASNGPAQGVLHVVGAAPGV IASSFSADFVGYANSPYGHVAIVKSVNSDGTITIKEGGYGTTWWGHERTVSASGVTFLMPN
Sequences:
>Translated_461_residues MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSKVDSLQQKQTSTKAQIAKIES EAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYMDAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKEL SQKSETVKKNYNQFVSLSQSLDSQAQELTSQQAELKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQ QKEAAQAQAASTAATAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSSSSSSSSSSSSSSSSNSNAGG NTNSGTSTGNTGGTTTGGSGINSSPIGNPYAGGGCTDYVWQYFAAQGIYIRNIMPGNGGQWASNGPAQGVLHVVGAAPGV IASSFSADFVGYANSPYGHVAIVKSVNSDGTITIKEGGYGTTWWGHERTVSASGVTFLMPN >Mature_461_residues MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSKVDSLQQKQTSTKAQIAKIES EAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYMDAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKEL SQKSETVKKNYNQFVSLSQSLDSQAQELTSQQAELKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQ QKEAAQAQAASTAATAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSSSSSSSSSSSSSSSSNSNAGG NTNSGTSTGNTGGTTTGGSGINSSPIGNPYAGGGCTDYVWQYFAAQGIYIRNIMPGNGGQWASNGPAQGVLHVVGAAPGV IASSFSADFVGYANSPYGHVAIVKSVNSDGTITIKEGGYGTTWWGHERTVSASGVTFLMPN
Specific function: Unknown
COG id: COG3883
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C51 domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): USP45_LACLM (P22865)
Other databases:
- EMBL: M60178 - EMBL: AM406671 - RefSeq: YP_001033744.1 - ProteinModelPortal: P22865 - SMR: P22865 - STRING: P22865 - GeneID: 4797218 - GenomeReviews: AM406671_GR - KEGG: llm:llmg_2507 - eggNOG: COG3883 - HOGENOM: HBG697354 - OMA: MSANNEL - ProtClustDB: CLSK698178 - InterPro: IPR007921
Pfam domain/function: PF05257 CHAP
EC number: NA
Molecular weight: Translated: 47364; Mature: 47364
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSK CCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH VDSLQQKQTSTKAQIAKIESEAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKELSQKSETVKKNYNQFVSLSQS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSQAQELTSQQAELKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQ HHHHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKEAAQAQAASTAATAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSSSSSSSSSSSSNSNAGGNTNSGTSTGNTGGTTTGGSGINSSPIGNPYAGGGCTDYVW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QYFAAQGIYIRNIMPGNGGQWASNGPAQGVLHVVGAAPGVIASSFSADFVGYANSPYGHV HHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCE AIVKSVNSDGTITIKEGGYGTTWWGHERTVSASGVTFLMPN EEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCC >Mature Secondary Structure MKKKIISAILMSTVILSAAAPLSGVYADTNSDIAKQDATISSAQSAKAQAQAQVDSLQSK CCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH VDSLQQKQTSTKAQIAKIESEAKALNAQIATLNESIKERTKTLEAQARSAQVNSSATNYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DAVVNSKSLTDVIQKVTAIATVSSANKQMLEQQEKEQKELSQKSETVKKNYNQFVSLSQS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSQAQELTSQQAELKVATLNYQATIATAQDKKQALLDEKAAAEKAAQEAAKKQAAYEAQ HHHHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKEAAQAQAASTAATAKAVEAATSSASASSSQAPQVSTSTDNTTSNASASNSSNSSSNSS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSSSSSSSSSSSSNSNAGGNTNSGTSTGNTGGTTTGGSGINSSPIGNPYAGGGCTDYVW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH QYFAAQGIYIRNIMPGNGGQWASNGPAQGVLHVVGAAPGVIASSFSADFVGYANSPYGHV HHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCE AIVKSVNSDGTITIKEGGYGTTWWGHERTVSASGVTFLMPN EEEEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123812