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The map label for this gene is ygcW [C]

Identifier: 125625207

GI number: 125625207

Start: 2402774

End: 2403514

Strand: Reverse

Name: ygcW [C]

Synonym: llmg_2450

Alternate gene names: 125625207

Gene position: 2403514-2402774 (Counterclockwise)

Preceding gene: 125625208

Following gene: 125625205

Centisome position: 95.02

GC content: 35.9

Gene sequence:

>741_bases
ATGAAAAAGAATATTGTAATTTTAGGTGGCACTTCTGGTGTAGGAAAAGCAATTGCTTTGGGTTTTAGAGATGATGAAGC
AAGACTTCTGATTATTGGGCGCAGTGAAGCAAAAGCTCAAAGGGTGAGTCATCAGGCTCACGGGAAAATTGATTTTCTTA
TTGCTGATTTGACTAACAAAAATGAGCAACGAAAGTTGATTCAAGAGACTGGTGAAAAGTTTGACCATATTGATGCATTA
ATCGATACTTTTGGCGTTTTCCCAAGTTCAGAAGAAATAAATATTCGCACGAATTTACAGGCGCATGCTGAGCTTATCCA
CCTGTTTGTTCCGCTTTTAGAAAAAAGTGAACAAGCACGTGTTGCTTTGGTTACGGGAAATCCTCAAATTCTTAAGTTAG
GAATGATTTGTTCTGGACAAAAGAATACGGTAGAGCGTGGAATTTGGGAAATTACTCATAAAACCTTGCTTATGAAATTA
GCTTCAAAAGAACTTTTTGAAAAAAATATTATGGTTAATTCGTTTTATCCCGGAGATGTCCAGAGTGATTTGATGTCTTG
GACCAAAACTCTGACCAATCATTCTGTTTCCGTTGGTCGAATGTTAGCTTTAGACGAAAGATATACTGGTGTGACTGGGA
AGATGTTTGATGACAAGGGAAATGAAGTGTTATTACCAGAAAAATACAATGCAGAAGTTGCAAGAGAAAAACTAGAAAAA
TATATAAAAAATACAATTTGA

Upstream 100 bases:

>100_bases
TAAAAGCCAACTTTTTACCGAACTTTATAAAGAAAAGGTATTTGACAAAATATAAGGATTCTTATTTTATTTTCTTTCTC
AATTTTCCTATACTGAAGCT

Downstream 100 bases:

>100_bases
TCAATTGATCAAATTGTATTTTTTATGAGCCAATTAATCTAAGCGCTTTTGCAATTTCTCAACAAATTCATAAGCTGCGG
GACAGTAAAGTGTATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Dehydrogenase; Short-Chain Alcohol Dehydrogenase; Short-Chain Dehydrogenase/Reductase SDR

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKNIVILGGTSGVGKAIALGFRDDEARLLIIGRSEAKAQRVSHQAHGKIDFLIADLTNKNEQRKLIQETGEKFDHIDAL
IDTFGVFPSSEEINIRTNLQAHAELIHLFVPLLEKSEQARVALVTGNPQILKLGMICSGQKNTVERGIWEITHKTLLMKL
ASKELFEKNIMVNSFYPGDVQSDLMSWTKTLTNHSVSVGRMLALDERYTGVTGKMFDDKGNEVLLPEKYNAEVAREKLEK
YIKNTI

Sequences:

>Translated_246_residues
MKKNIVILGGTSGVGKAIALGFRDDEARLLIIGRSEAKAQRVSHQAHGKIDFLIADLTNKNEQRKLIQETGEKFDHIDAL
IDTFGVFPSSEEINIRTNLQAHAELIHLFVPLLEKSEQARVALVTGNPQILKLGMICSGQKNTVERGIWEITHKTLLMKL
ASKELFEKNIMVNSFYPGDVQSDLMSWTKTLTNHSVSVGRMLALDERYTGVTGKMFDDKGNEVLLPEKYNAEVAREKLEK
YIKNTI
>Mature_246_residues
MKKNIVILGGTSGVGKAIALGFRDDEARLLIIGRSEAKAQRVSHQAHGKIDFLIADLTNKNEQRKLIQETGEKFDHIDAL
IDTFGVFPSSEEINIRTNLQAHAELIHLFVPLLEKSEQARVALVTGNPQILKLGMICSGQKNTVERGIWEITHKTLLMKL
ASKELFEKNIMVNSFYPGDVQSDLMSWTKTLTNHSVSVGRMLALDERYTGVTGKMFDDKGNEVLLPEKYNAEVAREKLEK
YIKNTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27591; Mature: 27591

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIVILGGTSGVGKAIALGFRDDEARLLIIGRSEAKAQRVSHQAHGKIDFLIADLTNK
CCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCC
NEQRKLIQETGEKFDHIDALIDTFGVFPSSEEINIRTNLQAHAELIHLFVPLLEKSEQAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
VALVTGNPQILKLGMICSGQKNTVERGIWEITHKTLLMKLASKELFEKNIMVNSFYPGDV
EEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH
QSDLMSWTKTLTNHSVSVGRMLALDERYTGVTGKMFDDKGNEVLLPEKYNAEVAREKLEK
HHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHH
YIKNTI
HHHHCC
>Mature Secondary Structure
MKKNIVILGGTSGVGKAIALGFRDDEARLLIIGRSEAKAQRVSHQAHGKIDFLIADLTNK
CCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCC
NEQRKLIQETGEKFDHIDALIDTFGVFPSSEEINIRTNLQAHAELIHLFVPLLEKSEQAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCE
VALVTGNPQILKLGMICSGQKNTVERGIWEITHKTLLMKLASKELFEKNIMVNSFYPGDV
EEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH
QSDLMSWTKTLTNHSVSVGRMLALDERYTGVTGKMFDDKGNEVLLPEKYNAEVAREKLEK
HHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHH
YIKNTI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA