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The map label for this gene is pqqE [H]

Identifier: 125625197

GI number: 125625197

Start: 2392017

End: 2393336

Strand: Reverse

Name: pqqE [H]

Synonym: llmg_2440

Alternate gene names: 125625197

Gene position: 2393336-2392017 (Counterclockwise)

Preceding gene: 125625198

Following gene: 125625196

Centisome position: 94.62

GC content: 27.8

Gene sequence:

>1320_bases
ATGTATGTTTTATCAGATGAATTATTATTTAGAGTTGAGAAAAACGGCGGAATTTTAATAAATAAAAATAATTTTAGCAG
ATTAGAATTGTCAGAAAGTGAGTCTATTTTTTTATCTTTAGTAAAAGAAATGGGAAAAGAAAAAGCATTTAACGAATACA
TAAAATATTTTAGTGCTGATTCTCTAACAAAAATTTTACGAGAAAAAATTTATAGAGAAGGAGAGATAAAAGAAAAAGGT
ATATCTTCTTTATCAATTATTAATAAAATACAAAGTAAAATTAAAGAGCTAAAAAAACTAAATCAAATCAGTTTTCCACT
AGAGTTAGTAATTTATCCTAGTATGTATTGCAATCTTCATTGTGGCTTTTGCTTTCTTGCAAACAGAGAAGATGAAAATG
TTCATCTTGCAGATGATTGGAAAAAGGTTTTAAGTCAAGCAAAAGAAAATGGAATTTTGTCATTTTCTATATTAGGTGGT
GAGCCAACAAAATATAAAGACATAGATAATCTTTTAAAAATCATTGATTCATTGAAAGTAGTGACAACAATAACAACAAA
CGGGCAAGAGATAAAAAAATCAACAATAGATATTATTTGCCAATCTGATTATATTACCCCAGTTATATCTCTTGAATCAA
TAGATGATTTTAAAAATTTTGAACTCATGGGTACAAGGTCAAAAAGAGGAATAGAATTAATAAAGCTTTTTCATGAAAGA
AAAAAGAAAGTCAGATTAAATACGGTTTATTCTAATCAAAGTGAGGAGGATATTGTGGAGCTTTTGAAGTTTGCGATTAA
AAACGAAATTGACCGTTTTTCTATTGCGGACTACTCCGAAGTGACTGGTTTTACAAAAATAACAAAAATTTACAATATAT
CAGACCTGAGAAAATTAGAAGAAAAAGTTAGAAGATATCTACTAGATAATAAAATAGATAATTTCAATTTTTCAGTTGAA
GGATGTTTTTATTTTACGGCTTTTCCAGAGTTAATTGAGGAAGGGGAAAATTTATCGGAGTTTGAAAATATGTATTTTGG
TTGTAGAGCAAAGTTTACGAAAATGGAGATTTTATCCAACGGAGATGTCTTACCTTGTATTGCATTTTTAGGTGAAAAGC
ATACTTCCAATGCTTTTCATCAAACATTGGATGAAATATGGAAAAACGATTCAAATTATACAAAAGTTAGAGAATTTAAA
ACGGAAAATAAAGATTGTTTAAAATGTTCAATGTTAAAAATTTGCGAGGGGGGATGCTATCCCAAATTACAAAGAACATT
AAATCCCAAGGTTACGAAAGATAAAACTTGTCAGTTATGA

Upstream 100 bases:

>100_bases
GCTAAAGGAGATGGATGGGCTGCTAGCAAATAAAATTTGATAGCAGAATTGGCGACATTTAGTCGCCTTTTTTTGAGTAA
TATTTAGAAAGGATGTTAAT

Downstream 100 bases:

>100_bases
AAATCATAATCAAATACAAACAACTTTTTCTATTTAAACTCTTTTTATCCCTCCTTCCCTATTTTTTTATTAGCATATTA
ATTATGAATGCTTTAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MYVLSDELLFRVEKNGGILINKNNFSRLELSESESIFLSLVKEMGKEKAFNEYIKYFSADSLTKILREKIYREGEIKEKG
ISSLSIINKIQSKIKELKKLNQISFPLELVIYPSMYCNLHCGFCFLANREDENVHLADDWKKVLSQAKENGILSFSILGG
EPTKYKDIDNLLKIIDSLKVVTTITTNGQEIKKSTIDIICQSDYITPVISLESIDDFKNFELMGTRSKRGIELIKLFHER
KKKVRLNTVYSNQSEEDIVELLKFAIKNEIDRFSIADYSEVTGFTKITKIYNISDLRKLEEKVRRYLLDNKIDNFNFSVE
GCFYFTAFPELIEEGENLSEFENMYFGCRAKFTKMEILSNGDVLPCIAFLGEKHTSNAFHQTLDEIWKNDSNYTKVREFK
TENKDCLKCSMLKICEGGCYPKLQRTLNPKVTKDKTCQL

Sequences:

>Translated_439_residues
MYVLSDELLFRVEKNGGILINKNNFSRLELSESESIFLSLVKEMGKEKAFNEYIKYFSADSLTKILREKIYREGEIKEKG
ISSLSIINKIQSKIKELKKLNQISFPLELVIYPSMYCNLHCGFCFLANREDENVHLADDWKKVLSQAKENGILSFSILGG
EPTKYKDIDNLLKIIDSLKVVTTITTNGQEIKKSTIDIICQSDYITPVISLESIDDFKNFELMGTRSKRGIELIKLFHER
KKKVRLNTVYSNQSEEDIVELLKFAIKNEIDRFSIADYSEVTGFTKITKIYNISDLRKLEEKVRRYLLDNKIDNFNFSVE
GCFYFTAFPELIEEGENLSEFENMYFGCRAKFTKMEILSNGDVLPCIAFLGEKHTSNAFHQTLDEIWKNDSNYTKVREFK
TENKDCLKCSMLKICEGGCYPKLQRTLNPKVTKDKTCQL
>Mature_439_residues
MYVLSDELLFRVEKNGGILINKNNFSRLELSESESIFLSLVKEMGKEKAFNEYIKYFSADSLTKILREKIYREGEIKEKG
ISSLSIINKIQSKIKELKKLNQISFPLELVIYPSMYCNLHCGFCFLANREDENVHLADDWKKVLSQAKENGILSFSILGG
EPTKYKDIDNLLKIIDSLKVVTTITTNGQEIKKSTIDIICQSDYITPVISLESIDDFKNFELMGTRSKRGIELIKLFHER
KKKVRLNTVYSNQSEEDIVELLKFAIKNEIDRFSIADYSEVTGFTKITKIYNISDLRKLEEKVRRYLLDNKIDNFNFSVE
GCFYFTAFPELIEEGENLSEFENMYFGCRAKFTKMEILSNGDVLPCIAFLGEKHTSNAFHQTLDEIWKNDSNYTKVREFK
TENKDCLKCSMLKICEGGCYPKLQRTLNPKVTKDKTCQL

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 50866; Mature: 50866

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVLSDELLFRVEKNGGILINKNNFSRLELSESESIFLSLVKEMGKEKAFNEYIKYFSAD
CEEECCEEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
SLTKILREKIYREGEIKEKGISSLSIINKIQSKIKELKKLNQISFPLELVIYPSMYCNLH
HHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE
CGFCFLANREDENVHLADDWKKVLSQAKENGILSFSILGGEPTKYKDIDNLLKIIDSLKV
EEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCEE
VTTITTNGQEIKKSTIDIICQSDYITPVISLESIDDFKNFELMGTRSKRGIELIKLFHER
EEEEECCCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH
KKKVRLNTVYSNQSEEDIVELLKFAIKNEIDRFSIADYSEVTGFTKITKIYNISDLRKLE
HHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHHH
EKVRRYLLDNKIDNFNFSVEGCFYFTAFPELIEEGENLSEFENMYFGCRAKFTKMEILSN
HHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEHHCC
GDVLPCIAFLGEKHTSNAFHQTLDEIWKNDSNYTKVREFKTENKDCLKCSMLKICEGGCY
CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
PKLQRTLNPKVTKDKTCQL
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MYVLSDELLFRVEKNGGILINKNNFSRLELSESESIFLSLVKEMGKEKAFNEYIKYFSAD
CEEECCEEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
SLTKILREKIYREGEIKEKGISSLSIINKIQSKIKELKKLNQISFPLELVIYPSMYCNLH
HHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEE
CGFCFLANREDENVHLADDWKKVLSQAKENGILSFSILGGEPTKYKDIDNLLKIIDSLKV
EEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCEE
VTTITTNGQEIKKSTIDIICQSDYITPVISLESIDDFKNFELMGTRSKRGIELIKLFHER
EEEEECCCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHH
KKKVRLNTVYSNQSEEDIVELLKFAIKNEIDRFSIADYSEVTGFTKITKIYNISDLRKLE
HHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHCHHHHHHHH
EKVRRYLLDNKIDNFNFSVEGCFYFTAFPELIEEGENLSEFENMYFGCRAKFTKMEILSN
HHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEHHCC
GDVLPCIAFLGEKHTSNAFHQTLDEIWKNDSNYTKVREFKTENKDCLKCSMLKICEGGCY
CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCC
PKLQRTLNPKVTKDKTCQL
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]