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The map label for this gene is yaeL [C]

Identifier: 125625171

GI number: 125625171

Start: 2356242

End: 2357528

Strand: Reverse

Name: yaeL [C]

Synonym: llmg_2413

Alternate gene names: 125625171

Gene position: 2357528-2356242 (Counterclockwise)

Preceding gene: 125625172

Following gene: 125625170

Centisome position: 93.2

GC content: 38.85

Gene sequence:

>1287_bases
TTGATAGAAACTCTGATTACTTTTATTATTATTTTTGGTATTATTGTCGCTATTCATGAATATGGTCACCTTTGGTGGGC
AAAACGTTCTGGAATTCTAGTGCGTGAATATGCCGTAGGAATGGGCCCGAAGATTTTTGCTCATCAAGCAAAAGATGGAA
CGCTCTACACGATTCGGATTTTACCACTTGGGGGCTATGTTCGTTTGGCCGGCTGGGGTGATGATAAAACTGAAATAAAA
AAAGGACAAGCTGCAAGTCTGGTTGTCAGTAAATCTGAAGCAGTAAATTCAGGAGATGAAAATTCTGTCAGTAATATTGT
CAGAAGAATTAATCTGTCAGAACATGTGGAATTAGAAGAAGCTGTTCCAATGTTAATCACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTGTTTGGAGAAATCAAACGTTATTCAGTTGACCATGATGCCACAATTATTGAAGAAGAT
GGCACTGAAGTCCGGATTGCTCCTCTTGATGTTCAATATCAATCAGCAGGGGTCTTCCATAAGATGTTGACGAATTTCGG
TGGTCCTTTGAATAACTTTATTCTAGGACTTGTCGCTTTTATCGTTTTAACTTTTATTCAAGGAGGCGTTCCATCAAATT
CTAATGCTATTGGGCAAGTAGAAAAAGGAACACCAGCCTACACCGCAGGTTTAAAATCTGGAGATAAAATTCAAGCTGTC
AATGGAACTAAAACAGCAGATTGGGATAAATTGGTCACAGAAATTTCAAGTTCTAATGGAAAAGAATTAAAACTTGAAAT
TAGCCGCTCAGGCAAATCAGAAACTTTGGCAGTTACCCCTAAAAAGATGGATGGCAGTTATCGTGTTGGAATCATGAAAT
CTATGAAAACAGGCTTCTTTGATAAAATTACAGGTGGTTTTGTTCAAGCAGGACAAGCGACCACAGCAATTTTCAGAGCA
TTAGGAAGTCTGATTGCACGACCGAGTCTTGATAAACTGGGTGGGCCAGTTGCCATCTATCAACTCAGCGGACAAGCGGC
AAGAGCAGGTTTGCCAACAATTATTCAGTTGTTAGCTATGCTCTCAATTAACTTAGGAATTGTCAATCTTTTCCCTATTC
CAGTGCTTGACGGTGGAAAAATCGTCTTAAATATTATTGAAGCAATTCGTGGCAAAGCACTTTCGCCTGAGAAAGAATCA
ATTATCACATTAGTCGGAGTTGTCTTCATGCTTGTGCTCTTTGTGGCTGTAACATGGAATGACATTCTACGGGCTTTTGT
CAACTAA

Upstream 100 bases:

>100_bases
ACCAGGTCATGGTGGAATTCTTGACCGTTTTGATAATCTTATTTTTGTTTTTCCGATTATGCATCTACTTGGACTGTTCT
AATCTAAAGGAGGAAGTCGA

Downstream 100 bases:

>100_bases
TATTATCTATTCGTCTTCTATTCAGAAAAAAAGAAGTTGAACCATACTCATAAAGGAAATTTTAAAATTATGAAACAATC
AAAAATGCTTATACCAACCC

Product: putative zinc metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFVAVTWNDILRAFVN

Sequences:

>Translated_428_residues
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFVAVTWNDILRAFVN
>Mature_428_residues
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEEAVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFFDKITGGFVQAGQATTAIFRA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKES
IITLVGVVFMLVLFVAVTWNDILRAFVN

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=230, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 46356; Mature: 46356

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRI
CHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEHHCCCCCHHEEEECCCCEEEEEEE
LPLGGYVRLAGWGDDKTEIKKGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEE
EECCCEEEEEECCCCHHHHCCCCCEEEEEECCHHCCCCCCHHHHHHHHHCCCHHCCCHHH
AVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEEDGTEVRIAPLDVQYQSAGVFH
CCCCEEEECCCCCEEEECHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEEEECCCHHHH
KMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEECCCCCCCEEEEE
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFF
CCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEEHHHHHHHCCCH
DKITGGFVQAGQATTAIFRALGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAM
HHHCCCHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCHHHCCCHHHHHHHHH
LSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKESIITLVGVVFMLVLFVAVTWN
HHHCCCEEEEEECEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DILRAFVN
HHHHHHCC
>Mature Secondary Structure
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRI
CHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEHHCCCCCHHEEEECCCCEEEEEEE
LPLGGYVRLAGWGDDKTEIKKGQAASLVVSKSEAVNSGDENSVSNIVRRINLSEHVELEE
EECCCEEEEEECCCCHHHHCCCCCEEEEEECCHHCCCCCCHHHHHHHHHCCCHHCCCHHH
AVPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEEDGTEVRIAPLDVQYQSAGVFH
CCCCEEEECCCCCEEEECHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEEEECCCHHHH
KMLTNFGGPLNNFILGLVAFIVLTFIQGGVPSNSNAIGQVEKGTPAYTAGLKSGDKIQAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEECCCCCCCEEEEE
NGTKTADWDKLVTEISSSNGKELKLEISRSGKSETLAVTPKKMDGSYRVGIMKSMKTGFF
CCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCEEEHHHHHHHCCCH
DKITGGFVQAGQATTAIFRALGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIIQLLAM
HHHCCCHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCHHHCCCHHHHHHHHH
LSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSPEKESIITLVGVVFMLVLFVAVTWN
HHHCCCEEEEEECEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DILRAFVN
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]