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The map label for this gene is yddQ [H]

Identifier: 125625094

GI number: 125625094

Start: 2292686

End: 2293228

Strand: Reverse

Name: yddQ [H]

Synonym: llmg_2333

Alternate gene names: 125625094

Gene position: 2293228-2292686 (Counterclockwise)

Preceding gene: 125625096

Following gene: 125625093

Centisome position: 90.66

GC content: 34.62

Gene sequence:

>543_bases
ATGAAACAAGCATTACTTATAATCGATATTCAAAATGATTATTTTCCAGAAGGCAAAAATGAGTTGCATGAAGCTGACAA
GGCTTTGCTAAAGGTCAATCAACTGGAAAATAGCTTTTTGTCTGAACAAAAGCCAATTATTTATATTCAACACATCAAGC
ATCAGCTGAATGCAGATTTTTTTGAAGCAGGGACAATTGGCTGTGAATTACACCCAAATCTCAAAGTGCAGGAACAGTCA
ATCATCATTGAAAAACATTTTCCTAATAGCTTTTTAGAGACAGAGTTACTTAGAACGCTAGAAAAATTAGAGATTGAGCA
GTTGGTCATCTGTGGAATGATGACACAAATGTGTGTTGATTCAACAACTCGAGCGGCAAAAGAACTTGGCTTTCAGCCAG
TATTGATTTCGGATGCAACAGCAACAAAAGATTTAATTTTTGAAGAAAAAAAAGTTTTGGCAGAAAATGTTCAAATTAGT
TTTCTTTCAGCCTTAAAAAATTTTGCGCAAGTACTGACAGCTGACCAATTCTTGCAAGGATAA

Upstream 100 bases:

>100_bases
TCTTAAATTTGAGTTATACTAATTTTAACATAGAGTGAGCGACTCTGTCAGAGAAATAATTATTGACAAACTGTTCAGTA
ACTTAAAAAAGAGGGCGAAA

Downstream 100 bases:

>100_bases
ACAATGAAAACAAGTGATGTCTTAATTGTGATTGATATGCAAAAAGGGGTATGTGACGGCATTTATCGGCGAAATGAATT
CATTGAGCAAATTAATCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKQALLIIDIQNDYFPEGKNELHEADKALLKVNQLENSFLSEQKPIIYIQHIKHQLNADFFEAGTIGCELHPNLKVQEQS
IIIEKHFPNSFLETELLRTLEKLEIEQLVICGMMTQMCVDSTTRAAKELGFQPVLISDATATKDLIFEEKKVLAENVQIS
FLSALKNFAQVLTADQFLQG

Sequences:

>Translated_180_residues
MKQALLIIDIQNDYFPEGKNELHEADKALLKVNQLENSFLSEQKPIIYIQHIKHQLNADFFEAGTIGCELHPNLKVQEQS
IIIEKHFPNSFLETELLRTLEKLEIEQLVICGMMTQMCVDSTTRAAKELGFQPVLISDATATKDLIFEEKKVLAENVQIS
FLSALKNFAQVLTADQFLQG
>Mature_180_residues
MKQALLIIDIQNDYFPEGKNELHEADKALLKVNQLENSFLSEQKPIIYIQHIKHQLNADFFEAGTIGCELHPNLKVQEQS
IIIEKHFPNSFLETELLRTLEKLEIEQLVICGMMTQMCVDSTTRAAKELGFQPVLISDATATKDLIFEEKKVLAENVQIS
FLSALKNFAQVLTADQFLQG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20462; Mature: 20462

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQALLIIDIQNDYFPEGKNELHEADKALLKVNQLENSFLSEQKPIIYIQHIKHQLNADF
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCC
FEAGTIGCELHPNLKVQEQSIIIEKHFPNSFLETELLRTLEKLEIEQLVICGMMTQMCVD
CCCCCCCEEECCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STTRAAKELGFQPVLISDATATKDLIFEEKKVLAENVQISFLSALKNFAQVLTADQFLQG
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQALLIIDIQNDYFPEGKNELHEADKALLKVNQLENSFLSEQKPIIYIQHIKHQLNADF
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCC
FEAGTIGCELHPNLKVQEQSIIIEKHFPNSFLETELLRTLEKLEIEQLVICGMMTQMCVD
CCCCCCCEEECCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STTRAAKELGFQPVLISDATATKDLIFEEKKVLAENVQISFLSALKNFAQVLTADQFLQG
HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]