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The map label for this gene is yvdE [H]

Identifier: 125625090

GI number: 125625090

Start: 2287381

End: 2288091

Strand: Direct

Name: yvdE [H]

Synonym: llmg_2329

Alternate gene names: 125625090

Gene position: 2287381-2288091 (Clockwise)

Preceding gene: 125625089

Following gene: 125625091

Centisome position: 90.43

GC content: 39.24

Gene sequence:

>711_bases
ATGGCAATTATTGGAATTCTTGGAACTCCTTACAACACAGTTGAACGTTCTCCTTTTTGGTGGAACAAAGTAAGCTATAC
ACGTCAATCTTTTATTGATGTTTTCCAGGAATTAGGTCACACTGTGATTGTTCTTCCTGTTGACAAAACCGAAAATATAA
AAAATTATCTGCCATTGGTCGATAAAATTGTACTGACTGGTGGCGTTGATGTCAGTCCTTATCTCTATGGCGAGGAACCT
CATGCTCAATTAGGAACGACTGACCCAATTCGTGACCGTTTTGAGCTTGCCGCAATTAAAGCTGCTCTAGAAGCGAATAA
ACCTATTCTTGGTGTATGTCGTGGCCTACAATTGCTCAATGTTTATTTTGGAGGAACTCTTTATCAAGACTTGAGCCTAA
CTTCAAGTCAGATAAAGCACCTCCAAAGTCCAACTCCCCAAGAAGTTCCGACACATCACATTAGCGTCGAAAAAGAAAGT
TCTTTAGATTTTTTACCTGAAAATTACATGGTCAATTCTTTCCACCATCAAGTCATTAAGGATTTGGGTCAGGGCTTGCA
GGCCATTGCTCATGGAAATGATGGCTTAGTTGAAGCGATTGAAAATAAAGAAAAACATGTGCTGGCTGTTCAATGGCATC
CAGAATGTACTTGGGAAACTGAGAATTTTGATAAGAAAATCTTTGAAATCTTCGCTAACGGAGACATCTAA

Upstream 100 bases:

>100_bases
GACTTTGAACATACGGTTCGTGATAATCGTAAAGTGACTTACGAGATTGATTTATCTCAATCTAAACTCATTATTCCTAT
TGAAAGTGTGAAAAATTAAT

Downstream 100 bases:

>100_bases
AAGATATAAAACCATCATAAATCTTTTTTATGGTGGTTTTTTTAAGTTTATGTTAATATTATCTCTATATTAAAAGTCTG
CTGACCAACAACCAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAIIGILGTPYNTVERSPFWWNKVSYTRQSFIDVFQELGHTVIVLPVDKTENIKNYLPLVDKIVLTGGVDVSPYLYGEEP
HAQLGTTDPIRDRFELAAIKAALEANKPILGVCRGLQLLNVYFGGTLYQDLSLTSSQIKHLQSPTPQEVPTHHISVEKES
SLDFLPENYMVNSFHHQVIKDLGQGLQAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETENFDKKIFEIFANGDI

Sequences:

>Translated_236_residues
MAIIGILGTPYNTVERSPFWWNKVSYTRQSFIDVFQELGHTVIVLPVDKTENIKNYLPLVDKIVLTGGVDVSPYLYGEEP
HAQLGTTDPIRDRFELAAIKAALEANKPILGVCRGLQLLNVYFGGTLYQDLSLTSSQIKHLQSPTPQEVPTHHISVEKES
SLDFLPENYMVNSFHHQVIKDLGQGLQAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETENFDKKIFEIFANGDI
>Mature_235_residues
AIIGILGTPYNTVERSPFWWNKVSYTRQSFIDVFQELGHTVIVLPVDKTENIKNYLPLVDKIVLTGGVDVSPYLYGEEPH
AQLGTTDPIRDRFELAAIKAALEANKPILGVCRGLQLLNVYFGGTLYQDLSLTSSQIKHLQSPTPQEVPTHHISVEKESS
LDFLPENYMVNSFHHQVIKDLGQGLQAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETENFDKKIFEIFANGDI

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=218, Percent_Identity=36.2385321100917, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26564; Mature: 26433

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIGILGTPYNTVERSPFWWNKVSYTRQSFIDVFQELGHTVIVLPVDKTENIKNYLPLV
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
DKIVLTGGVDVSPYLYGEEPHAQLGTTDPIRDRFELAAIKAALEANKPILGVCRGLQLLN
HHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VYFGGTLYQDLSLTSSQIKHLQSPTPQEVPTHHISVEKESSLDFLPENYMVNSFHHQVIK
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
DLGQGLQAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETENFDKKIFEIFANGDI
HHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
AIIGILGTPYNTVERSPFWWNKVSYTRQSFIDVFQELGHTVIVLPVDKTENIKNYLPLV
EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
DKIVLTGGVDVSPYLYGEEPHAQLGTTDPIRDRFELAAIKAALEANKPILGVCRGLQLLN
HHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VYFGGTLYQDLSLTSSQIKHLQSPTPQEVPTHHISVEKESSLDFLPENYMVNSFHHQVIK
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
DLGQGLQAIAHGNDGLVEAIENKEKHVLAVQWHPECTWETENFDKKIFEIFANGDI
HHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]