| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is ps516
Identifier: 125625018
GI number: 125625018
Start: 2215928
End: 2216722
Strand: Reverse
Name: ps516
Synonym: llmg_2253
Alternate gene names: NA
Gene position: 2216722-2215928 (Counterclockwise)
Preceding gene: 125625019
Following gene: 125625017
Centisome position: 87.64
GC content: 43.65
Gene sequence:
>795_bases TTGACACCCAAAGAACAAGCCCTAAACTGTATTAATCGCGGTTTTTCTGTTATCGCTGGTTTTCCTGCTGGAAAAAGCGA AAGGGCAATTATAAAGGGGAGTTCTTCAGGAAGTCTTGACGAAATCACAGTGAGCGCGTGGTTTGATGAAATACCGAACC GCAACATCATGATTAATCTTAGGAATAGCGGTTTGATTTGTATTGACTTAGACCAGCACCAAAACGGACAGAACGGCAGA ACTGTATTCAGTCGATTGTGGAATGAACACAGCGAGGGCGAAATATTAAGTGCCTATGTCGAGAAGACACCCACAGGCAA CGGCTTACACGTTTTCTTTAAAGTTCCGAAAGAGCTATTTAATCAACCGATTGTCAATGAACTAGCGGACGGCGTGGAGA TAAAAACACACTTTACACCCATCTACCCAAGCAAACGCACAGACGGCGATTATATCCCTTTGAATGATACCGAAACCAAT AAGCCCTTAACTTTCGATAGTCTTTGCGATTGCCCTGACTGGTTACTTGAAATGATACAACGACCGCAGGCACGCGCAAC AACTGGCACAAGTAGCCGAACTTATGGCGCTGAAATGTGGGAGCTATTCAACCAAGGCGCACGAAAAGGCAACCGAAACA ATGACACGAACCGTATTCTTCACTACTGGAGAAAAATAGGCATTGATAATAATAGCTGTATGGACTTATTGCGAACATTT AACAATCGAACCAGTCCGCCCTTACCTGATGACGAGCTGGCAACTATTTGGAAAAGTGTATTCAAGATGAAATAG
Upstream 100 bases:
>100_bases TCAAGAAACAACGCACAGGCATTGCGATTAATAATGCAGTCAACGGCTACACCCTTGCAGAACTTGATTGGATTGACCAA CTCTTTGAGGAGGTTGACTA
Downstream 100 bases:
>100_bases AAAGGAAGTCATGACAGACCAATTAGATAAACTTGTGGCAGAAACGCCACAGGAAAACGTAAGAAGTCCGAAACCTAAAA TAGAGGACTTCACAGATTAT
Product: phage protein by Glimmer/Critica
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTPKEQALNCINRGFSVIAGFPAGKSERAIIKGSSSGSLDEITVSAWFDEIPNRNIMINLRNSGLICIDLDQHQNGQNGR TVFSRLWNEHSEGEILSAYVEKTPTGNGLHVFFKVPKELFNQPIVNELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETN KPLTFDSLCDCPDWLLEMIQRPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNSCMDLLRTF NNRTSPPLPDDELATIWKSVFKMK
Sequences:
>Translated_264_residues MTPKEQALNCINRGFSVIAGFPAGKSERAIIKGSSSGSLDEITVSAWFDEIPNRNIMINLRNSGLICIDLDQHQNGQNGR TVFSRLWNEHSEGEILSAYVEKTPTGNGLHVFFKVPKELFNQPIVNELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETN KPLTFDSLCDCPDWLLEMIQRPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNSCMDLLRTF NNRTSPPLPDDELATIWKSVFKMK >Mature_263_residues TPKEQALNCINRGFSVIAGFPAGKSERAIIKGSSSGSLDEITVSAWFDEIPNRNIMINLRNSGLICIDLDQHQNGQNGRT VFSRLWNEHSEGEILSAYVEKTPTGNGLHVFFKVPKELFNQPIVNELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETNK PLTFDSLCDCPDWLLEMIQRPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNSCMDLLRTFN NRTSPPLPDDELATIWKSVFKMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29913; Mature: 29782
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKEQALNCINRGFSVIAGFPAGKSERAIIKGSSSGSLDEITVSAWFDEIPNRNIMINL CCCHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE RNSGLICIDLDQHQNGQNGRTVFSRLWNEHSEGEILSAYVEKTPTGNGLHVFFKVPKELF CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHC NQPIVNELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETNKPLTFDSLCDCPDWLLEMIQ CCHHHHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCHHHHHHHHH RPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNSCMDLLRTF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH NNRTSPPLPDDELATIWKSVFKMK CCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TPKEQALNCINRGFSVIAGFPAGKSERAIIKGSSSGSLDEITVSAWFDEIPNRNIMINL CCHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE RNSGLICIDLDQHQNGQNGRTVFSRLWNEHSEGEILSAYVEKTPTGNGLHVFFKVPKELF CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHC NQPIVNELADGVEIKTHFTPIYPSKRTDGDYIPLNDTETNKPLTFDSLCDCPDWLLEMIQ CCHHHHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCHHHHHHHHH RPQARATTGTSSRTYGAEMWELFNQGARKGNRNNDTNRILHYWRKIGIDNNSCMDLLRTF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH NNRTSPPLPDDELATIWKSVFKMK CCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA